HHsearch 1.5 NAME c7zmh3_ FAM FILE c7zmh3_ COM /bmm/www/servers/phyre2/HH/hhmake -i c7zmh3_.a3m DATE Sat Dec 3 11:28:02 2022 LENG 101 match states, 101 columns in multiple alignment FILT 103 out of 240 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.3 EVD 0.4791 0.6552 SEQ >ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHTTHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC C >sa_dssp EDEECDEEDEDDDDDEDEEDDEEEEDEEEEEEEEEEEEEEDCEECDDDCEEDCDDCDEECEECEECEEEDEEEBDDDBEECDDECDEDDEEBEEECCDEE E >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC C >ss_conf 9789999999999999999999982278899665788552389999999999999999999999999630499999999999999999999997484345 9 >Consensus MxxixixxxxxxxxxxxxlxxxxllxxxxPxexxarxxFxixfylvAilFliFDvEixxLxPwavxxxxxxxxxxxxxxxFlxiLxxGxxYewxkGaLex n >c7zmh3_ MSAMSIYIIFVSIIAILFLAIDLIFAPHNPYKSQSRSPFNISFFIYGLVFLLLDLEILLLYPFAVSEYVNSAYGLAAALIFIGIITIGFVYELGHDALKV H >UniRef50_B2BS92(2-113:115) NADH-ubiquinone oxidoreductase chain 3 n=3 Tax=Collembola RepID=B2BS92_9HEXA E=4e-07 s/c=0.50 id=24% cov=95% ---ILLIMVLTLVISTALIMLNSLISSKKGTsreklsafecgydpKSPSRLPFSMQFFLIAVIFLIFDVEITLIIPMPMILKVLdMWLWVLLTFLFIIIL VGGTIHEWKEGSL--- >UniRef50_Q3S281(36-148:148) NADH-ubiquinone oxidoreductase chain 3 n=5 Tax=stramenopiles RepID=Q3S281_THAPS E=6e-12 s/c=0.64 id=22% cov=100% -SVILIFLFVAVLLSVVIVALSYILAVQNPETEKlstyecgfepyedARHTFDVKFYLVAILFIVFDIETMFLIPWTNVLGQLDIVGFWSMIDFMFELGI GYIYIYCVGALDIN >UniRef50_Q9MIY3(1-114:116) NADH-ubiquinone oxidoreductase chain 3 n=318 Tax=Eumetazoa RepID=NU3M_DANRE E=7e-09 s/c=0.54 id=27% cov=99% MNLFATILIIMTTLSLVLALVSFWLPQMNsdteklsPYECgfdplgSARLPFSLRFFLVAVLFPLFDLEIALLLPLPWGDQLNNPMeTLFWAMTVLILLT LGLAYEWAQGGLE-- >UniRef50_Q11XR9(13-134:177) NADH-quinone oxidoreductase subunit n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11XR9_CYTH3 E=3e-14 s/c=0.65 id=22% cov=98% ---ILLFIITGIVFVLIGVGVAALLRPNRPNIEklmvyecgedavgKAWVNMNARYYLTALIFVLFEVEVIYLFPIATVYGDhrldaatqgaWTIFSLIE ILIFITLLFIGLVYVWRKGYLDWN >UniRef50_B1KJU8(5-115:122) NADH-quinone oxidoreductase subunit n=2 Tax=Shewanella RepID=B1KJU8_SHEWM E=3e-09 s/c=0.57 id=25% cov=95% --SFIFYSFAIIIVTLTMLLVSHALNPRGqkrknsyPYESgivpvgDTNIRWNVNYFLIAISFVIFDIEAVYLYLWSLVVLETSWPGLTTAGLFILALFI ALIYEIKQGA---- >UniRef50_Q2C5T2(9-119:124) NADH-quinone oxidoreductase subunit n=2 Tax=Photobacterium RepID=Q2C5T2_9GAMM E=2e-07 s/c=0.51 id=24% cov=100% MIGVFSLLVFAVIASILFIsksigGFGRRFDKEQPFECgllpsgTTKHNFSISYYLIAVAFLIFELEAAILFAWGVDYWQLGIPGVIAGVTFLVILLLGF IYMIRKGVFQI- >UniRef50_D2D0K4(8-114:116) NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Laodelphax striatellus RepID=D2D0K4_9HEMI E=0.0002 s/c=0.44 id=28% cov=97% --SMTVFILTLLITASFLISKKSILdvNKSSPFECgfknfsSSRMSFSIHFFMIAIIFLMFDIEIAIMLPIFVSIKMMKIYQWtIASMLITMIITYGLYH EWINGVIE-- >UniRef50_Q2WGH6(53-118:121) NAD(P)H-quinone oxidoreductase subunit 3 (Fragment) n=2 Tax=Selaginella RepID=Q2WGH6_SELUN E=2e-11 s/c=1.06 id=26% cov=65% ----------------------------------TRTQFQIRYYMFASVPVAPDAETVSLHPWATSFRESGVSAFTEASTSVAIPIVGSVYARRKGALE- - >UniRef50_Q6VEH1(1-105:108) NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Siphonodentalium lobatum RepID=Q6VEH1_9MOLL E=2e-05 s/c=0.48 id=22% cov=91% -------FSIALIIPTIVMFLPFILAQSRTDTElysafecgfdnlnHREFHSHPSFFYYQVIFLIFDMELVILIPLIWGSNTMSIITFSS---FLLVVLL GWLYEWREGSLAWN # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * 4031 91 * * * * * * * * * 1 0 * * * * * * 4130 0 0 S 2 * * * * * * * 2681 * 3483 4573 2193 * * 3349 1668 3626 * * * 2 0 * * * * * * 4582 0 0 A 3 2227 * * * * 2749 * 4315 5910 5268 * * * * * 1506 2987 3910 * * 3 0 * * * * * * 5107 0 0 M 4 6399 * * * 2981 * * 1748 * 1876 3073 * * * * 5799 6053 2981 * 6279 4 0 * * * * * * 5269 0 0 S 5 3693 * * * 3576 3304 * 3423 * 1625 4396 * * * * 5437 3042 2964 * * 5 0 * * * * * * 5273 0 0 I 6 3243 * * * 4553 * 6299 1829 * 1473 7016 * * * * 5883 4947 2834 * * 6 0 * * * * * * 5273 0 0 Y 7 4489 * * * 1749 5829 5449 4520 * 2429 5502 6336 * 4819 * 3938 4406 4774 * 2563 7 0 * * * * * * 5273 0 0 I 8 3973 * * * 2087 6614 * 2152 * 2036 4464 * * * * 6260 4968 2925 * * 8 0 * * * * * * 5311 0 0 I 9 3980 5417 * * 4915 3909 * 1897 * 1889 4884 * * * * 5180 5726 2486 5947 * 9 0 * * * * * * 5328 0 0 F 10 3290 6185 * * 2702 3682 * 2817 * 2047 4308 * * * * * 4099 2647 * * 10 0 * * * * * * 5328 0 0 V 11 1613 5190 * * 6759 2893 * 3181 * 4375 6075 * 5385 * * 3341 4207 2719 * * 11 0 * * * * * * 5328 0 0 S 12 3106 5068 * * 4754 4902 * 3056 * 2263 4830 * 4067 * * 3981 3750 2168 * * 12 0 * * * * * * 5332 0 0 I 13 3364 5603 * * 3852 2734 * 2061 * 2407 6442 * * * * * 4330 2528 * * 13 0 * * * * * * 5316 0 0 I 14 5957 * * * 2063 6344 * 1925 * 2237 5139 * * * * 5035 5210 2784 6292 6288 14 0 * * * * * * 5314 0 0 A 15 1889 4424 * * 5256 3218 * 5206 * 5113 4284 * 3707 * * 2521 3785 3253 * 6122 15 0 * * * * * * 5314 0 0 I 16 2612 5283 * * 3755 4023 * 3146 * 2006 * * 5611 * * 3911 3142 3146 * * 16 0 * * * * * * 5314 0 0 L 17 2759 * * * 4340 3090 * 2456 * 2661 5618 * * 6292 * 5767 4557 2161 * 5179 17 0 * * * * * * 5314 0 0 F 18 3575 * * * 2815 3696 * 3244 * 2189 3170 4943 4133 * * 4999 5047 3188 * * 18 10 * 7115 * * * * 5314 0 0 L 19 4595 * * * 3894 * * 2707 4902 1294 3757 * * * * 4489 4702 2967 * 6350 19 23 5953 * 2322 322 0 * 5316 1000 1000 A 20 3378 * * * 3449 2371 * 3896 4663 2417 4802 * * * * 4105 4268 2609 6034 * 20 16 6466 * 1585 585 * * 5314 1000 0 I 21 2403 6535 * * 5356 6081 * 3765 6030 1431 5633 6122 * * 6682 5094 4443 2461 * * 21 0 * * * * * * 5314 0 0 D 22 3710 6701 6454 * 6655 2782 * * 5075 * * 2154 4086 6417 * 1479 5088 4868 * * 22 0 * * * * * * 5314 0 0 L 23 3342 * * 6570 4602 5079 4729 4246 4176 2710 4080 6713 6138 * 2939 3932 5497 5121 4198 2863 23 13 6831 * 2000 415 * * 5314 1000 0 I 24 5257 * 3990 6292 3326 * * 2342 6682 1310 5423 6288 * * 5957 * 5499 3572 5069 * 24 17 6417 * 2807 222 * * 5314 1000 0 F 25 * * * * 3120 * * 2708 6492 977 6925 * * * 3790 6296 6132 3683 5179 * 25 32 5529 * 1866 463 * * 5324 1546 0 A 26 2350 * 4982 3238 6638 1953 6621 * * * * 4399 4319 6198 3277 2886 5767 5654 * * 26 100 3899 * 2567 267 * * 5324 2972 0 P 27 6962 * 6786 5619 5659 4952 6565 6590 2150 * * * 1191 3641 5640 4318 5678 4703 * 5817 27 16 6529 * 1585 585 * * 5324 1000 0 H 28 4906 * 6825 6143 * 5370 3639 * 2329 5367 5232 3123 * 5082 2218 2500 6635 5246 * 5890 28 148 3355 * 3045 186 * * 5324 3315 0 N 29 4307 * * 6846 * 6373 * 4720 2865 * * 2770 * 4932 2173 1860 5469 4202 * * 29 356 2193 * 3137 174 * * 5338 4162 0 P 30 5277 * * 6067 * 6535 6781 * 4658 6690 6945 * 419 6828 * 4078 4447 6466 * 6777 30 37 5316 * 3400 144 * * 5337 1613 0 Y 31 * * 3207 5730 2331 5224 6926 * * * 7230 3284 6863 6263 * 4167 3999 6299 * 1406 31 29 5668 * 3760 111 * * 5337 1591 0 K 32 4729 * * 1058 6620 6314 6145 4500 3421 6700 * 5689 3231 5029 4847 4129 4337 * * * 32 31 5551 * 3328 151 * * 5369 1642 0 S 33 3773 1378 5566 1959 * 4144 * * 6568 6357 * 5494 * 6701 6477 3360 5848 5230 * * 33 917 1088 * 2817 221 * * 5369 5022 0 Q 34 * * 3981 5316 * 3934 5341 * 1468 * * 3803 3559 4668 6181 2635 3483 * * * 34 499 1773 * 3647 120 * * 5369 4295 0 S 35 1268 * 4974 6401 * 4367 * 6487 7011 6989 6311 5903 4439 6071 6210 2981 2236 5434 * * 35 69 4422 * 3700 116 * * 5372 2493 0 R 36 5926 * * 4713 * 4567 6686 * 4463 5570 * 4127 4458 4813 885 6571 * 6401 2998 * 36 11 7083 * 3700 115 * * 5372 1000 0 S 37 4047 * * 4534 3934 3357 4343 2783 5309 3727 4662 4483 4500 5357 6848 3336 3816 3232 * * 37 29 5656 * 2807 222 * * 5372 1630 0 P 38 5114 * 5890 * * 4469 5251 6700 3240 * 6951 4356 1868 3132 2011 4371 5265 * * * 38 0 * * * * * * 5345 0 0 F 39 6344 * * * 432 * * 6131 * 3899 5149 * * 6671 * 6224 6270 4698 6658 4258 39 8 7478 * 1585 585 * * 5340 1000 0 N 40 6341 6592 2976 7423 * 5578 4707 * 4972 * * 2589 3457 4098 7185 1296 6013 * * 6959 40 0 * * * * * * 5340 0 0 I 41 4197 * * * 6272 6912 * 1741 * 2755 5095 * 4798 6735 * 4147 6341 1584 * * 41 0 * * * * * * 5340 0 0 S 42 4120 * * 6726 * 4603 4925 5817 2290 6747 * 4955 4226 3530 1368 3882 * * * * 42 0 * * * * * * 5340 0 0 F 43 * * * * 688 * 6503 5691 * 6200 * * * * * * * * 6592 1621 43 0 * * * * * * 5340 0 0 F 44 5691 6746 * * 1527 * * 5660 * * * * * * * 6312 * * * 757 44 0 * * * * * * 5340 0 0 I 45 5691 * * * 6156 6496 5881 3860 * 738 3511 * 6863 6701 7048 * 6082 3279 * 4692 45 0 * * * * * * 5340 0 0 Y 46 6592 * * * 3800 * * 1872 * 3594 * * * 5691 * * 4274 1403 * 3151 46 0 * * * * * * 5340 0 0 G 47 262 * * * * 4301 * * * 6430 6496 * * 6224 * 4599 5591 5881 * * 47 0 * * * * * * 5340 0 0 L 48 6671 * * * 6270 * * 1221 * 2241 3016 * * * * 5654 6651 2549 * 6344 48 0 * * * * * * 5340 0 0 V 49 5436 5691 * * 4379 * * 2442 * 928 5152 * * * * 5052 4920 3205 * * 49 0 * * * * * * 5340 0 0 F 50 * * * * 137 * * * * 5098 * * 5654 * * * * * * 4599 50 0 * * * * * * 5340 0 0 L 51 * * * * 6519 * * 2296 * 1100 4492 * 6362 * * * * 1930 * * 51 0 * * * * * * 5340 0 0 L 52 3900 * * * * * * 1262 * 2117 4476 * 5660 * * * * 2180 * * 52 0 * * * * * * 5340 0 0 L 53 * * * * 123 * * * * 4807 6792 * 5654 * * * * * 5881 * 53 0 * * * * * * 5340 0 0 D 54 5306 * 172 3524 * * * * * * * * * * * * * * * * 54 0 * * * * * * 5340 0 0 L 55 5654 7194 * * 4919 * * 1899 * 2083 4874 * * * * * * 1314 * * 55 0 * * * * * * 5340 0 0 E 56 * * 4444 88 * * * * * 6272 * * * * * * * * * * 56 0 * * * * * * 5340 0 0 I 57 2724 * * * * 5975 * 1579 * 3523 5482 * * * * 5307 3014 2060 * * 57 0 * * * * * * 5340 0 0 L 58 1897 * * * 5691 * * 2581 * 2789 5054 * * * * 4070 5472 1849 * 6591 58 0 * * * * * * 5340 0 0 L 59 * * * * 1178 * * 3609 * 1873 6345 * * * * 5070 5097 6341 * 3065 59 0 * * * * * * 5340 0 0 L 60 * 6792 * * 4018 * * 2859 * 608 3334 * * * * * 5905 5698 * * 60 0 * * * * * * 5340 0 0 Y 61 6759 * * * 1345 * 5654 3307 * 2638 5019 * * * * * * 6687 6421 1925 61 0 * * * * * * 5340 0 0 P 62 3872 * * * * * * 6863 * 5686 * * 195 * * 5519 * 6894 * * 62 15 * 6591 * * * * 5340 0 0 F 63 6210 5104 * * 3323 * * 4179 * 3977 4913 * * * * 5257 * 3845 959 3389 63 0 * * * * * 0 5336 0 1000 A 64 880 5822 * * 4458 5030 * 4901 * 6338 6971 * 3227 * * 3848 5114 3267 * * 64 13 6793 * 0 * 0 * 5336 1000 1000 V 65 3922 * * 6132 5588 5691 * 2797 * 2913 3696 6642 * 5094 * 6812 3621 1475 5291 6514 65 16 6496 * 1000 1000 * * 5340 1000 0 S 66 3002 5513 5030 * 6802 3838 * 3320 6592 4859 6701 4405 * 4860 6912 2004 4453 2375 6430 * 66 45 * 5020 * * * * 5340 0 0 E 67 3832 6798 6282 6631 1993 5557 * 3637 * 2438 4770 * 6623 * * 4099 * 4074 5483 2525 67 80 4217 * 2137 372 * 0 5313 2702 1970 Y 68 4386 6786 4569 6600 6574 2813 5977 6679 2704 3920 * 3168 6893 4267 2856 4795 5199 5347 6141 3628 68 53 4792 * 2245 342 521 1722 5313 2292 1970 V 69 4044 * 2845 2550 5473 3776 6036 5687 4968 3709 5442 3643 6955 4036 7390 3387 4609 4133 * 5697 69 133 3509 * 2254 339 * 0 5331 3186 1000 N 70 4894 * 6454 6511 5479 4847 * 3112 5776 1743 3355 3572 * 6140 * 3620 5106 3936 4703 4502 70 72 4359 * 1482 639 * 0 5331 2412 1000 S 71 4323 * 5719 6303 5664 1364 * 6955 4330 6308 4373 3584 5142 * * 2257 4100 * 6366 * 71 25 5841 * 2431 296 * 0 5331 1519 1000 A 72 3782 * 7064 * 4382 6454 * 3166 6330 1988 5874 5510 4291 6659 5659 3330 4508 4043 2872 5370 72 29 5632 * 2407 301 * 0 5331 1705 1000 Y 73 4000 * * 4235 2649 4919 4945 4502 * 3664 4637 * 4259 * 5930 3526 3414 3816 5376 2719 73 18 6349 * 0 * * 0 5331 1000 1000 G 74 2373 * 6665 * 6330 1335 * 5479 6207 6793 4521 * 5479 6178 * 3359 3470 4241 6578 6338 74 48 6023 5859 4616 60 0 * 5331 1601 1000 L 75 6180 6577 * * 1918 5529 * 4066 * 1678 * * * * * * 5342 2846 4439 3220 75 46 4987 * 0 * 0 * 5321 1818 1000 A 76 4022 * * * 3252 4282 * 2426 * 3357 4385 * * * * 5000 4051 2345 2903 5135 76 14 6674 * 0 * * * 5340 1000 0 A 77 2900 6430 6043 1980 6132 5179 * 3713 4726 4166 4897 * 5057 6066 6936 3240 3856 3503 6362 6345 77 19 * 6224 * * * * 5340 0 0 A 78 2861 * * * 4004 4245 * 2928 * 3610 1713 * * * * 3850 4893 3271 6374 6612 78 0 * * * * * 0 5308 0 1000 L 79 3626 5207 * * 2876 4889 * 3158 * 1868 3372 6890 * 5635 * 4164 4748 3551 6343 5633 79 0 * * * * * 0 5308 0 1000 I 80 5095 7034 5712 6121 3077 3854 * 1943 * 2317 * * * * * 5202 3573 2556 * * 80 0 * * * * 0 * 5308 0 1000 F 81 * * * * 161 6132 * 5259 * 5350 * * * * * 5654 * 6362 * 6894 81 0 * * * * * * 5340 0 0 I 82 5863 * * * 4525 * * 1725 * 1279 3866 * * * * 6767 4475 3293 * * 82 0 * * * * * * 5340 0 0 G 83 2659 * * * 3371 2769 * 3208 * 1810 4775 * 6315 * * * 4358 3224 * * 83 0 * * * * * * 5340 0 0 I 84 4937 * 6892 5728 5291 * * 1343 * 2710 6430 * * 6714 * 6651 4128 1840 * * 84 21 6132 * 0 * * * 5340 1000 0 I 85 * * * * 5661 6386 * 4293 * 242 * * 5654 * * * * 4274 * * 85 0 * * * * * * 5340 0 0 T 86 3389 6707 * 6802 3108 4976 * 3284 * 2086 5408 6360 * * * 4192 2575 2818 * * 86 0 * * * * * * 5340 0 0 I 87 3080 * * 6713 5861 5511 * 2411 * 2055 5167 * * * * 5496 6825 1745 5908 5025 87 17 * 6386 * * * * 5340 0 0 G 88 2510 * * * * 376 * * * * * * 6703 * * 5500 6303 6709 * * 88 0 * * * * 0 * 5337 0 1000 F 89 * * 6380 * 1812 * * 4891 * 1257 * * * * * 4874 5489 4098 4949 3267 89 0 * * * * * * 5340 0 0 V 90 2520 * * * 3639 5523 * 1755 * 2878 * * * * * * * 2408 6912 3400 90 0 * * * * * * 5340 0 0 Y 91 * * * * 4709 * 3681 * * 6338 * * * * * * * 4502 4128 377 91 0 * * * * * * 5340 0 0 E 92 2121 * * 926 6156 * * 4614 * 3523 6195 * * * * * * 3503 * * 92 0 * * * * * * 5340 0 0 L 93 * * * * 6812 * * 2874 6315 3128 5316 * * * 5654 * * 4683 782 4000 93 0 * * * * * * 5340 0 0 G 94 4891 6642 * 6701 4821 3810 * 6184 1787 4762 6341 4398 * 4566 2063 3406 * 4643 6421 6345 94 0 * * * * * * 5340 0 0 H 95 6738 * 6665 2401 * * 5707 5707 1164 5751 4818 4058 * 5072 3914 4544 5476 5581 * 6588 95 0 * * * * * * 5334 0 0 D 96 * * 5697 6510 * 245 * * 3786 * * 4556 * * 6498 * * * * * 96 0 * * * * * * 5334 0 0 A 97 853 * 5774 * * 3545 * 4460 * 6098 6562 * * * 6238 3296 6758 2841 * 6976 97 0 * * * * * * 5047 0 0 L 98 * * * * 4446 * * 4308 * 194 6390 * * * * * * 5837 * * 98 0 * * * * * * 5304 0 0 K 99 5420 * 3535 1163 * * * * 2622 * * 5161 * 4344 3595 3394 5258 * * * 99 0 * * * * * * 4859 0 0 V 100 * * * * * * * 1766 4425 3385 * * * * * * * 4319 961 * 100 0 * * * * * * 4319 0 0 H 101 * * 3672 * * * 1902 * * * * 613 * * * * * * * * 101 0 * * 0 * * * 3901 0 0 //