HHsearch 1.5 NAME c7z51E_ FAM FILE c7z51E_ COM /bmm/www/servers/phyre2/HH/hhmake -i c7z51E_.a3m DATE Wed Jun 22 02:21:22 2022 LENG 74 match states, 74 columns in multiple alignment FILT 10 out of 14 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.1 EVD 0.4817 2.3014 SEQ >ss_dssp CCCCCCCCSTTCCCSSCCSSCCCCHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC >sa_dssp EEEEEEEDEEEEEEEEEEEEEDECEEDCEEEBEDCCEEDDEEBEDCDEEBEEEDEDEEDCEDDCDEDDDECBDE >ss_pred CCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC >ss_conf 93235444577566420111004699999999767874803999999999998353367999999999823579 >Consensus SVxixxHxxxxLxxrxxxWlxxxxxxxxlqrvExWxxrNpxxaxxxvxixwllgxxxxqrviixiLlLlvxPaY >c7z51E_ SVLIPSHAQGELTGRGHKWLEGDSLRTHLTRVEGWVWKNKLLALAMVTVVWLTLESVVTRVAVLVVLLCLAPVY >UniRef50_B5KM05(201-274:3418) Polyprotein (Fragment) n=1 Tax=Barkedji virus RepID=B5KM05_9FLAV E=0.0002 s/c=0.63 id=33% cov=101% SVAIAPHGNGGLSTRKDKWLAADASMLHLQKVERWMISNPGYAAVAVFLGYMLGTTTVQKAVLVILLLMVAPAY >UniRef50_Q04538(204-277:3415) Methyltransferase/RNA-directed RNA polymerase NS5 n=425 Tax=root RepID=POLG_POWVL E=3e-25 s/c=1.55 id=56% cov=101% SVVIPTHAQKDMVGRGHAWLKGDNIRDHVTRVEGWMWKNKLLTAAIVALAWLMVDSWMARVTVILLALSLGPVY >UniRef50_Q7T918(222-295:3425) Polyprotein n=3 Tax=Flavivirus RepID=Q7T918_9FLAV E=4e-07 s/c=0.75 id=29% cov=101% SVALTNHVEETLNTRGERWAVDKIGKQQFEKIERWIIRNPLYALAVVGISYMLGSNVGQRIIICILLLLVAPAY >UniRef50_P33478(206-278:3396) Methyltransferase/RNA-directed RNA polymerase NS5 n=6644 Tax=root RepID=POLG_DEN1S E=5e-07 s/c=0.76 id=18% cov=100% SVALAPHVGLGLETRTETWMSSEGAWKQIQRVETWALRHPGFTVIALFLAHAIGTSITQKGIIFILLMLVTPS- >UniRef50_B9TRQ0(211-284:3442) Polyprotein n=705 Tax=Flavivirus RepID=B9TRQ0_9FLAV E=2e-21 s/c=1.39 id=29% cov=101% SVGISAHGSGGLAHKKTRWMSVDASMEHFQRTERWVLRNPGYALIAGLMGWMLGSNRTQKVMFIILLLLVIPAY >UniRef50_Q1X881(211-284:3412) Methyltransferase/RNA-directed RNA polymerase NS5 n=397 Tax=Flavivirus RepID=POLG_YEFVN E=8e-21 s/c=1.36 id=24% cov=101% AIDLPTHENHGLKTRQEKWMTGRMGERQLQKIERWLVRNPFFAVTALAIAYLVGNNTTQRVVIALLVLAVGPAY >UniRef50_P05769(218-291:3434) Methyltransferase/RNA-directed RNA polymerase NS5 n=2839 Tax=Flavivirus RepID=POLG_MVEV5 E=9e-21 s/c=1.36 id=28% cov=101% SITVQTHGESTLVNKKDAWLDSTKATRYLTKTENWIIRNPGYALVAVVLGWMLGSNTGQKVIFTVLLLLVAPAY >UniRef50_C3VP79(217-291:3435) Polyprotein n=26 Tax=Flaviviridae RepID=C3VP79_9FLAV E=1e-19 s/c=1.30 id=29% cov=101% SVALAPHGTGNLhTGEAPMWKSHTDASKYLQRVERWALRNPGYLGILVAIGWLLGKTTAQRVIYITLLVLIGPAY >UniRef50_P29838(106-379:776) Envelope protein E (Fragment) n=153 Tax=Flavivirus RepID=POLG_LANVY E=1e-137 s/c=0.42 id=60% cov=101% SVLIPSHAQRDLTGRGHQWLEGEAVKAHLTRVEGWVWKNKLFTLSLVMVAWLMVDGLLPRILIVVVALALVPAY # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 3173 * * * * * * * * * * * * * * 170 * * * * 1 0 * * * * * * 3089 0 0 V 2 * * * * * * * 2292 * * * * * * * * * 330 * * 2 0 * * * * * * 3089 0 0 L 3 1328 * 3173 * * 3407 * * * 2333 * * * * * * 3422 3256 * * 3 0 * * * * * * 3089 0 0 I 4 * * * * * * * 1057 * 1231 * * * * * * * 3422 * * 4 0 * * * * * * 3089 0 0 P 5 1729 * * * * * * * * * * * 1272 3422 * 3407 3371 * * * 5 0 * * * * * * 3089 0 0 S 6 3407 * * * * * * * * * * 3371 1729 * * 2333 1695 * * * 6 0 * * * * * * 3089 0 0 H 7 * * * * * * 0 * * * * * * * * * * * * * 7 0 * * * * * * 3089 0 0 A 8 1722 * * 3173 * 1412 * * * * * * * * * * * 2251 * * 8 0 * * * * * * 3089 0 0 Q 9 * * * 2396 * 3140 * * * * * 2365 * 1722 * 3407 3253 * * * 9 0 * * * * * * 3089 0 0 G 10 * * * 3371 * 1388 3173 * 3256 3140 * * * * 3340 3422 * * * * 10 0 * * * * * * 3089 0 0 E 11 * * 2297 3325 * 1315 * * * * * 3253 * * * * 2396 * * * 11 0 * * * * * * 3089 0 0 L 12 * * * * * * * * * 159 3256 * * * * * * * * * 12 160 3253 * 0 * * * 3089 1000 0 T 13 3407 * * 3140 * * * * 3173 * * 3371 * * * 3587 1721 2336 * * 13 0 * * * * * * 3089 0 0 G 14 * * * * * 1293 3407 * * * * 3422 * * * * 1307 * * * 14 0 * * * * * * 3089 0 0 R 15 * * * 3253 * * * * 2414 * * * * * 499 * * * * * 15 0 * * * * * * 3089 0 0 G 16 3253 * * * * 1322 * * 1884 * * * * 3173 * * 3140 * * * 16 0 * * * * * * 3089 0 0 H 17 * * 2502 1639 * * 1722 * * * * * 3253 * * * 3407 * * * 17 0 * * * * * * 3089 0 0 K 18 2336 * * * * * * * 1767 * 3253 * * 3340 2389 * 3140 * * * 18 0 * * * * * * 3089 0 0 W 19 * * * * * * * * * * * * * * * * * * 0 * 19 0 * * * * * * 3089 0 0 L 20 3371 * * * * * * * 3253 1060 1650 * * * * * * * * * 20 0 * * * * * * 3089 0 0 E 21 3587 * 3422 2333 * * * * 3256 * * * * * * 1677 3173 3371 * * 21 0 * * * * * * 3089 0 0 G 22 3587 * 3371 * * 1272 3253 * * * * * * * * 2274 * 3407 * * 22 0 * * * * * * 3089 0 0 D 23 * * 1388 2236 * * * * 3371 * * * * * 3173 * 2335 * * * 23 0 * * * * * * 3089 0 0 S 24 1856 * 3253 * * 3140 * 3371 3422 * 3173 3256 * * * 3325 * * * * 24 0 * * * * * * 3089 0 0 L 25 1682 * * * * 2268 * 3256 * 3325 * * * * * 2494 * 3340 * * 25 0 * * * * * * 3089 0 0 R 26 * * * 3173 * * * * 2355 * 2494 * * * 2290 3253 3422 * 3140 * 26 0 * * * * * * 3089 0 0 T 27 3340 * 3256 3407 * * * * 2195 3587 * * * 3371 2292 * 3325 * * * 27 0 * * * * * * 3089 0 0 H 28 * * * * * * 1057 * * * * * * 1639 * * * * * 2335 28 0 * * * * * * 3089 0 0 L 29 * * * * 2389 * * 3140 * 759 * * * * * * * 3256 * * 29 0 * * * * * * 3089 0 0 T 30 * * * 3371 * * * * * * * * * 980 * * 1335 * * * 30 0 * * * * * * 3089 0 0 R 31 * * * * * * * * 1380 * * * * * 699 * * * * * 31 0 * * * * * * 3089 0 0 V 32 * * * * * * * 2268 * * * * * * * * 2414 725 * * 32 0 * * * * * * 3089 0 0 E 33 * * * 0 * * * * * * * * * * * * * * * * 33 0 * * * * * * 3089 0 0 G 34 * * * * * 1722 * * * * * 3422 * * 1029 * 3140 * * * 34 0 * * * * * * 3089 0 0 W 35 * * * * * * * * * * * * * * * * * * 0 * 35 0 * * * * * * 3089 0 0 V 36 2195 * * * * * * 2396 * 3173 2412 * * * * * * 1772 * * 36 0 * * * * * * 3089 0 0 W 37 * * * * * * * 1872 * 1677 * * * * * * * 3173 1722 * 37 0 * * * * * * 3089 0 0 K 38 * * * * * * * * 1722 * * * * * 705 3587 * * * * 38 0 * * * * * * 3089 0 0 N 39 * * * * * * 3140 * * * * 174 * * * * * * * * 39 0 * * * * * * 3089 0 0 K 40 * * * * * * * * 1722 * * * 521 * * * * * * * 40 0 * * * * * * 3089 0 0 L 41 * * * * 3173 1031 * * * 1322 * * * * * * * * * * 41 0 * * * * * * 3089 0 0 L 42 * * * * 1630 * * * * 2290 * * * * * * * * * 1082 42 0 * * * * * * 3089 0 0 A 43 790 * * * * * * * * 3253 * * * * * * 1658 * * * 43 0 * * * * * * 3089 0 0 L 44 2412 * * * * 3253 * * * 1050 * * * * * * * 2156 * * 44 0 * * * * * * 3089 0 0 A 45 1732 * * * * * * 1677 * * * * * * * 3340 3173 2502 * * 45 0 * * * * * * 3089 0 0 M 46 1014 * * * * * * 3256 * 2296 3325 * * * * * * 3371 * * 46 0 * * * * * * 3089 0 0 V 47 * * * * * 3407 * * * 2156 * * * * * * * 554 * * 47 0 * * * * * * 3089 0 0 T 48 1642 * * * 2346 3371 * * * 3407 3340 * * * * * 3325 3422 * * 48 0 * * * * * * 3089 0 0 V 49 * * * * * * * 1678 * 1341 3407 * * * * * * 2333 * * 49 0 * * * * * * 3089 0 0 V 50 1225 * * * * 1412 * * * * * * * * * 3371 * 3325 * * 50 0 * * * * * * 3089 0 0 W 51 * * * * * * 3140 * * * * * * * * * * * 747 1782 51 0 * * * * * * 3089 0 0 L 52 3140 * * * * * * * * 946 1444 * * * * * * * * * 52 0 * * * * * * 3089 0 0 T 53 * * * * * * * 3140 * 1082 2297 * * * * * 3325 3173 * * 53 0 * * * * * * 3089 0 0 L 54 * * * * * 521 * * * 3325 * * * * * * * 2297 * * 54 0 * * * * * * 3089 0 0 E 55 * * 2297 3325 * * * * 3253 * * 3173 * * * 1815 2346 * * * 55 0 * * * * * * 3089 0 0 S 56 * * * * * 3340 * * * * * 1339 * * * 1653 2410 * * * 56 0 * * * * * * 3089 0 0 V 57 * * * * * * * 3140 * 3340 * * * * 3407 * 1350 2348 3256 * 57 0 * * * * * * 3089 0 0 V 58 3253 * * * * 2396 * * * 3340 3256 * * * * * 1650 2450 * * 58 0 * * * * * * 3089 0 0 T 59 3256 * * * * * * * * * * * 3340 521 * * 3325 * * * 59 0 * * * * * * 3089 0 0 R 60 * * * * * * * * 1380 * * * * * 700 * * * * * 60 0 * * * * * * 3089 0 0 V 61 3587 * * * * 3140 * 2355 * * * * * * * * * 718 * * 61 0 * * * * * * 3089 0 0 A 62 3325 * * * * * * 1292 * 3340 3407 * * * * * 3256 2365 * * 62 0 * * * * * * 3089 0 0 V 63 * * * * 2414 * * 1252 * 3587 * * * * * * * 2290 * 3253 63 0 * * * * * * 3089 0 0 L 64 3173 3371 * * 3140 * * 1718 * 3325 * * * * * * 3422 2458 * * 64 0 * * * * * * 3089 0 0 V 65 * * * * * * * 1367 * 2214 * * * * * * 3253 1777 * * 65 0 * * * * * * 3089 0 0 V 66 * * * * * * * * * 319 * * * * * * * 2333 * * 66 0 * * * * * * 3089 0 0 L 67 2297 * * * * * * * * 544 * * * * * * * 3173 * * 67 0 * * * * * * 3089 0 0 L 68 * * * * * * * * * 355 3140 * * * * * * 3253 * * 68 0 * * * * * * 3089 0 0 C 69 2254 3325 * * * * * * * 992 3587 * * * * 3256 * * * * 69 0 * * * * * * 3089 0 0 L 70 * * * * * * * 3253 * 1722 * * * * * * * 757 * * 70 0 * * * * * * 3089 0 0 A 71 1423 * * * * 1642 * 3407 * * * * * * * * 3140 3340 * * 71 0 * * * * * * 3089 0 0 P 72 * * * * * * * * * * * * 0 * * * * * * * 72 0 * * * * * * 3089 0 0 V 73 552 * * * * * * * * * * * * * * 3140 * 2290 * * 73 0 * * * * * * 3089 0 0 Y 74 * * * * * * * * * * * * * * * * * * * 0 74 0 * * 0 * * * 2948 0 0 //