HHsearch 1.5 NAME c6z9uC_ FAM FILE c6z9uC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6z9uC_.a3m DATE Sat Jul 3 08:40:38 2021 LENG 95 match states, 95 columns in multiple alignment FILT 105 out of 226 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.2 EVD 0.4624 1.4296 SEQ >ss_dssp CTHHHHHHHHHHHHHTTCEEESCCCTTSCCEEECSHHHHTSCCCEEEECCTTSCCCTHHHHHHHHTTCSTTCEEEEEEECTTSCEEEEEEECCCC >sa_dssp EEDEECDDDBEDCEEEDDDCDECEEDEDECDDDEBEEDDEEEDEDEDECDDEEECDEEEDEDBCEEDECDECCCCCCBDDEEEEDDEEDDEDEEE >ss_pred CCHHHHHHHHHHHHHCCCEECCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEECC >ss_conf 97145419989999879757225316601799638987776259999920888307999865423012576159999992898676999997259 >Consensus PxfxxkyxVyxdLrxrGxxvxxGxkFGxdflvYxxxpxxxHSxxlVxvxxxxxxxxxxxlxxxxRlaxxvkKxxilaxvxxxxxixyxxixWxxx >c6z9uC_ PAHELRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWAPEDTIPLQDLVAAGRLGTSVRKTLLLCSPQPDGKVVYTSLQWASL >UniRef50_C5A2D9(77-167:168) tRNA-splicing endonuclease n=4 Tax=Thermococcus RepID=ENDA_THEGJ E=2e-26 s/c=1.31 id=25% cov=97% --FDAKYLVYKDLRDRGYTVKSGLKFGSHFRVYRRG-MDEHSQWLVWVLPENSRLSPNDITARVRVAHGVRKNMIMAIVDEDADVTYYKVEWVR- >UniRef50_A7TJG5(140-238:240) Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TJG5_VANPO E=8e-14 s/c=0.79 id=26% cov=97% ---RFTFPLYKKLLSEHISVLPGSRFGCRYVGYPGDPLKYHSQYLIHtpIDYHKDKLDLLSLISTARLGTVVKKSQVISgcisnnGSDNEVEVKLFTLEW CG- >UniRef50_A8MAJ3(74-158:184) tRNA intron endonuclease, catalytic-like protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MAJ3_CALMQ E=0.0002 s/c=0.55 id=20% cov=88% -----RFMVYLDLRNRGLYVKPVRDGKIDMLVWDKKKNALSSnpQYMIKILDEGRGIKTTELLELTDYAERNRMKLILALLSSEGTLTYY------- >UniRef50_Q6P7W5(332-430:460) tRNA-splicing endonuclease subunit Sen2 n=26 Tax=Tetrapoda RepID=SEN2_MOUSE E=1e-20 s/c=1.02 id=24% cov=97% PTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIIELLDDnyegslrrPFSWKSLAALSRVSGNVSKELMLCYLIKPSTMTAEDME- --- >UniRef50_Q9AW86(151-239:242) Putative tetrameric tRNA splicing endonuclease n=1 Tax=Guillardia theta RepID=Q9AW86_GUITH E=5e-15 s/c=0.92 id=24% cov=95% -----KYTVFKDLWKKGFTIVCGYKFGGTYLAYANKLEKVHSYVMVLVCLSYEYFKTIEIVSLGRLSCSTKKIGIISTINLEFYPIYFGIRWKS- >UniRef50_Q9AW44(54-148:171) Putative uncharacterized protein n=1 Tax=Guillardia theta RepID=Q9AW44_GUITH E=7e-07 s/c=0.58 id=24% cov=86% PEFIWNYFLYRKFNLMNSNLKSGIKFGGNFLIYKYESriLHNHSKFILRnsnenffnevckICNYNINQKVEKFQNESRLANQVSKKFIYINIDP----- --------- >UniRef50_Q4N9D0(6-84:93) Putative uncharacterized protein n=1 Tax=Theileria parva RepID=Q4N9D0_THEPA E=2e-07 s/c=0.72 id=17% cov=82% --EDIRKALEKYFSGLGYKTADGTNFGSDLVIYTKaGPNLSHSKYLLFII--DSKVTWREVITYYRVSSQTAKIALVAFKQK-------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 4970 0 0 A 2 2331 * 3137 2731 5522 5110 * * 3962 * * 3704 * 3761 4559 2914 4691 * * 4115 2 0 * * * * * * 5290 0 0 H 3 4605 * * 2332 734 * 5933 * * 5435 * 5749 * * 5749 * 4984 4302 * * 3 0 * * * * * * 5754 0 0 E 4 3347 * 2724 2862 4521 * 5843 3934 4802 3655 * 5834 3717 * 2413 5842 * * 3786 * 4 58 4672 * 961 1040 * * 5827 1653 0 L 5 2958 * * 4670 4117 5372 * 2759 6268 2071 4806 6428 6211 * 4404 * 4180 2690 4911 * 5 0 * * * * * * 6022 0 0 R 6 5968 * 6077 4282 6143 6777 6375 6341 1520 * 5102 3203 * 6405 1687 5689 4859 7027 * * 6 0 * * * * * * 6164 0 0 Y 7 * 3516 * 5053 2496 * 4966 * 5927 3859 * 6131 * * 5407 6018 * * * 903 7 0 * * * * * * 6176 0 0 S 8 2931 * 6399 4303 6041 6333 4610 3307 3300 2300 4777 4972 4682 5517 3563 4438 6396 4264 * 6890 8 18 * 6306 * * * * 6227 0 0 I 9 3567 * * * * * * 2789 * 3310 * 6602 * * * * 4733 707 * 6717 9 0 * * * * * 0 6219 0 1000 Y 10 * * * 6045 1746 * * * * 6251 * * * * * * 6141 6257 * 630 10 0 * * * * 0 * 6234 0 1000 R 11 3505 4768 * 5361 5820 * 4289 6485 2173 4309 5705 5712 * 3311 2309 3793 4964 4488 * 6766 11 0 * * * * * * 6257 0 0 D 12 6472 * 994 4535 5283 * 3918 * 3990 * * 6029 * 5058 * 6753 6584 5850 * 2277 12 0 * * * * * * 6275 0 0 L 13 * * * * 2431 * * 5392 * 463 * * * * * * 7212 * 5558 4752 13 16 * 6459 * * * * 6318 0 0 W 14 6697 * * 6413 * * 3785 6730 3814 5031 * 5361 * 5126 950 6161 5011 4661 2838 * 14 41 5163 * 0 * 0 * 6315 1633 1000 E 15 5299 * 3336 2601 * 6251 6487 * 3217 5201 * 2607 * 4085 3185 2435 5861 * * 5909 15 0 * * * * * * 6318 0 0 R 16 6706 * * 5493 6902 * 4068 * 1884 3653 4188 5292 * 4051 1474 5418 6204 * * 6353 16 24 5910 * 0 * * * 6318 1638 0 G 17 5580 * 5208 * * 445 5429 * 5882 5796 * 3111 * * 7084 4779 * * * * 17 0 * * * * * * 6318 0 0 F 18 * 6972 * * 2398 6791 7157 6203 6057 3017 * 6481 * * 3879 5671 6539 6811 2631 1497 18 23 5973 * 1000 1000 * * 6359 1000 0 F 19 * 5260 * * 2649 * 5301 2695 4139 5582 5398 6272 5681 * 5286 6203 3631 2159 * 2670 19 0 * * * * * * 6359 0 0 L 20 5185 * * * * * * 2672 * 2540 4499 * 2665 * * * 4861 1396 * 5189 20 16 6476 * 0 * * * 6359 1000 0 S 21 4300 * * 5104 * 4106 6818 6616 1755 4631 5401 4910 * 5146 2511 4219 2801 4364 * * 21 18 6337 * 1000 1000 * * 6359 1000 0 A 22 4917 4333 2771 4786 * 5774 6068 * * 6543 6749 5403 1944 * 5973 1933 3399 5315 * * 22 0 * * * * * * 6359 0 0 A 23 4103 * 5175 * * 191 * * * * * * * * * * 6476 5229 * * 23 0 * * * * * * 6359 0 0 G 24 4199 7005 4592 * 3192 5397 * 2935 5470 2431 4812 * 4377 6866 3849 3402 4321 3440 * 5264 24 48 5681 6235 1585 585 * * 6359 1000 0 K 25 5181 6508 4548 4761 * 5000 5425 6240 909 6443 * 4694 * 4231 2583 * * 6492 * * 25 74 6508 4675 0 * * 0 6359 1000 1000 F 26 * 6448 * * 570 4569 * * * * 6407 * 5750 * 5774 * * * * 2156 26 54 5750 5792 2585 263 1458 653 6303 1000 1877 G 27 * 5831 5837 * * 226 * * 5119 4848 * * * * * 5358 5495 * * * 27 0 * * * * 1606 575 6311 0 1841 G 28 2701 2502 * * * 1860 4668 5153 * 6316 * * * 6763 * 3285 3631 3040 * * 28 45 * 5021 * * 1000 1000 6315 0 1547 D 29 6018 * 777 4300 * 6592 3893 * 5289 6895 * 3299 5389 6137 5249 * 3936 7075 * * 29 0 * * * * 1482 639 6286 0 1961 F 30 * * * * 679 * * * * 3313 4753 * * * * * * * 4464 2379 30 0 * * * * 947 1055 6320 0 1489 L 31 5350 * * * * * * 4199 5046 1288 4813 * * * 2378 5102 5460 2312 * * 31 0 * * * * * 0 6352 0 1000 V 32 2514 * * * 6237 5128 * 3052 5595 1988 * * * * * * * 1359 * * 32 30 * 5595 * * * 0 6352 0 1000 Y 33 * * * * 4401 * * * * * * * * * 5381 * * * 5152 151 33 63 4914 6740 1773 499 934 1070 6302 1964 1442 P 34 4960 6799 3955 3053 * * 5681 * 2825 5657 * 7048 1898 4345 2573 4941 4287 * 6675 7216 34 69 5053 5914 1724 520 932 1071 6347 2053 1582 G 35 6315 * 3755 4914 7396 1480 5279 * 2560 6760 * 4696 6268 5225 2925 3823 6419 * * 5736 35 28 5696 * 0 * * 0 6334 1570 1657 D 36 6710 6910 1485 4529 * 1996 4518 5664 3209 * * 5504 6312 * 5895 4185 6263 4641 * * 36 110 4300 5480 810 1219 883 1127 6327 2163 1657 P 37 4343 6403 5257 5374 6188 5787 * * 4173 4857 6406 4713 712 * 4867 4031 * * * 6490 37 56 5454 6028 1288 760 382 2105 6309 1677 2125 L 38 6585 * 3617 3059 5816 3310 * 5835 4897 2329 4560 3342 4824 5869 4290 3517 4946 4547 6352 * 38 15 * 6577 * * 945 1057 6346 0 1540 R 39 3898 5733 4955 4238 3603 * 5224 3952 3514 2713 6821 6352 * 4613 2392 * 4470 3896 6442 4683 39 58 * 4663 * * 1078 926 6328 0 1591 F 40 5457 4857 4112 3950 2830 4361 5899 6379 3753 4329 * 4886 6000 * 4694 4100 4515 3576 * 2292 40 42 6887 5619 1585 585 974 1026 6299 1000 2332 H 41 6002 * 5931 5854 * 6161 206 * 5929 * * * * * * 5082 * * * 5384 41 25 5849 * 1000 1000 * 0 6291 1000 2011 A 42 1699 * * * * 3467 * * * * * * * * * 792 5371 * * * 42 68 4436 * 1000 1000 * 0 6233 1488 2011 H 43 * 6581 4265 3022 4511 6954 2548 6502 2545 4588 6392 * 4699 3759 5320 2760 4986 * * 4678 43 0 * * * * 604 1548 6233 0 2011 Y 44 4274 * 6471 * 2449 6550 3800 6137 * 3528 6068 * * 5928 * 4518 5179 5650 4942 1267 44 53 6226 5473 0 * 0 * 6330 1000 1000 I 45 4504 4217 * 5812 6219 4297 * 2587 * 1374 4405 * * * 5903 4474 3722 3588 * * 45 0 * * * * 0 * 6286 0 1000 A 46 5371 6615 * * * * * 1995 * 3162 * * * * * 5546 * 782 * * 46 15 6624 * 2585 263 * * 6322 1000 0 Q 47 * * 5215 * 4105 * 3296 3691 3154 2673 * 4934 * 3856 2969 4759 5190 3502 5473 4012 47 73 4350 * 2112 380 * * 6322 2344 0 C 48 4656 3715 6704 * 4732 5199 7463 2019 * 3494 * * 5006 * 6831 4496 6170 1518 * 5560 48 111 5700 4196 2094 385 * * 6322 1614 0 W 49 4879 3648 5501 6879 5343 * 6521 3509 4211 1823 5057 * * 3466 6208 5185 * 2574 7194 4075 49 79 5780 4821 2623 256 * 0 6299 1554 2738 A 50 4471 6730 3019 2578 * 6396 5686 6566 3920 5595 6597 3796 3080 4471 5188 2685 4377 5232 * 5455 50 130 4108 5154 3780 109 * 0 6315 2879 3422 P 51 * 7207 3462 1804 * 5454 6017 5717 3985 5222 6497 4213 3597 5507 4300 3505 4815 6492 4651 3758 51 93 5040 4968 2005 413 983 1017 6300 2133 3789 E 52 * 6168 1909 3164 5506 2349 5739 * 5538 * * 2650 5614 6973 3646 5843 5051 6508 6310 6497 52 81 4970 5482 1883 456 471 1845 6197 2055 3430 D 53 5211 * 2730 2439 5706 4645 5830 5388 3674 6039 6435 5831 4723 3501 3219 3782 3645 * 6549 5825 53 62 5113 6217 2501 281 1992 418 6250 2133 2524 T 54 7041 * * 3137 6815 4631 5891 4189 2955 * 6711 4275 2314 5052 4128 3196 3579 4287 5398 6436 54 14 6728 * 1000 1000 1888 454 6293 1000 2601 I 55 * * * 6259 2791 * 5777 1891 6773 1911 4663 6739 6191 6156 5366 5648 6076 3108 * 5160 55 33 * 5456 * * 1516 621 6318 0 2139 P 56 * * 2305 4466 6567 6906 6832 5078 2796 * * 4689 2885 5092 4478 2410 3380 * * 5752 56 58 5107 6635 3796 108 2256 339 6328 2148 2840 L 57 3758 5656 5388 * 4121 7021 5979 3970 6809 2661 3950 4589 3243 * 6040 3950 4220 3756 2951 5514 57 28 6631 6743 3322 152 1299 753 6289 1000 2708 Q 58 * * 4086 4426 5285 4602 4625 4997 3859 2672 5336 5038 4298 4180 3654 3072 3065 6838 * 4564 58 0 * * * * 1895 452 6300 0 2384 D 59 4537 * 1895 1982 * 4843 5905 * 4579 4505 * 4461 * 3574 6077 3518 5579 5169 * 5845 59 27 5744 * 0 * 0 * 6363 1567 2122 L 60 7231 * * 6078 3724 * * 1722 6469 1191 3927 * * * 6391 * * 4002 6585 * 60 17 * 6394 * * * * 6322 0 0 V 61 3631 * * 5713 * * 5806 1899 6817 3318 6830 5486 * 4167 * 2932 4614 2101 * 6223 61 22 * 6014 * * 0 * 6305 0 1000 A 62 2184 5319 5165 4107 * 3166 * * 4490 3933 * 4859 * 4925 2957 2471 4183 5972 * * 62 0 * * * * * 0 6305 0 1000 A 63 3047 * 4374 5532 3986 3410 5513 3734 4030 2643 4297 6226 * 6767 5933 4110 4552 5866 3474 4790 63 0 * * * * * 0 6305 0 1000 G 64 3549 4272 6656 * 5718 2442 * 3625 * 3741 6387 3516 * 4666 * 3604 3874 2383 * 6256 64 0 * * * * * 0 6305 0 1000 R 65 * * 5228 3927 * * * * 5466 * * * * 5236 247 * * 5979 * * 65 0 * * * * * 0 6305 0 1000 L 66 5097 6387 * 4380 6816 5828 * 3098 5964 1090 5751 * * * 4793 * 5063 2551 * 5228 66 0 * * * * * 0 6305 0 1000 G 67 1029 4021 * * * 2638 * 4957 * 4999 6562 * * * * 2679 5765 4679 * * 67 0 * * * * * 0 6307 0 1000 T 68 4632 6593 6378 3277 * 4443 2590 6225 6808 4174 5960 3343 * 4866 6067 3731 2114 4009 6357 * 68 0 * * * * * 0 6307 0 1000 S 69 4464 * 6834 4950 5441 2945 5283 4951 4964 * 5827 3777 * 3623 4171 1510 3857 5436 * * 69 0 * * * * * 0 6307 0 1000 V 70 3859 * 5827 * * * * 4823 * 4641 4717 3971 * * * 4621 3266 789 * 6295 70 0 * * * * * 0 6307 0 1000 R 71 4521 * 4754 6180 * 4840 5255 * 1547 * * 2698 * * 1802 4027 * * * * 71 0 * * * * * 0 6307 0 1000 K 72 * * * * 6180 * 5827 * 212 6159 4810 * * * 4948 * * * 5439 * 72 0 * * * * 0 * 6307 0 1000 T 73 4468 7107 5086 2305 * 6167 5950 3779 2663 5291 * 3923 * 4838 3589 3796 2787 5902 * 6401 73 0 * * * * * * 6323 0 0 L 74 4449 5291 * * 3268 4145 6572 5781 * 1609 3264 6545 4255 6168 * 4859 4528 3571 4677 5076 74 17 6435 * 1000 1000 * * 6323 1000 0 L 75 6271 5902 * * 6810 * * 1761 * 1724 4622 * * * * * 6918 1737 6077 * 75 14 6699 * 1585 585 * * 6323 1000 0 L 76 6795 * * 6207 3230 * * 2605 * 1086 4599 * * 6757 * * 5730 3107 * 4319 76 32 6742 6310 4087 87 * * 6323 1000 0 C 77 789 2973 * * * 3586 * 4397 6708 5791 5938 * 7131 * * 4309 6841 4237 * * 77 98 4055 7439 2597 261 0 * 6415 2957 1000 S 78 6828 4736 5729 5977 3698 3613 4591 2615 5817 3242 6653 5384 * * 6393 3580 3324 3093 * 3547 78 26 * 5791 * * 0 * 6383 0 1000 P 79 5889 * * 4457 4635 6764 * 3427 4050 3145 5843 4968 5369 * * 6062 4852 1128 5075 6446 79 114 4488 5006 2391 305 0 * 6379 2651 1583 Q 80 6744 * 1579 3801 * * 6442 5632 4649 * * 3327 5280 3818 4225 2422 5100 4902 * 6191 80 79 4599 6341 1344 723 392 2072 6463 2462 2065 P 81 4302 6341 2706 2850 * 4283 5223 6678 2744 4397 * 4698 3438 5961 3562 4341 4439 6481 * 5495 81 45 5464 6990 2993 194 0 * 6445 1505 1560 D 82 5201 * 2465 1905 * 4486 * * 4124 * * 2978 3334 4981 6051 5134 3499 * * 4923 82 90 5127 4961 1564 596 * 0 6393 2061 1000 G 83 5783 6067 4319 3724 4496 1540 * * 3255 6122 5846 3297 6943 6378 * 3157 4290 5928 * 6063 83 134 3680 6546 0 * 0 * 6388 2806 2589 K 84 * * 2480 2318 6150 4888 * 6097 2968 5038 * 3068 4908 3712 6978 3654 4362 5534 * 6243 84 35 5941 6963 2092 386 0 * 6368 1695 1000 V 85 4434 * 5387 5075 * * * 1536 * 3322 6306 * 4171 * * * 5437 1458 * * 85 0 * * * * 0 * 6283 0 1000 V 86 4384 * 4529 3313 5973 * 4268 4389 3746 6207 6920 4229 * 4526 3200 3885 2177 3609 * 5651 86 0 * * * * * * 6276 0 0 Y 87 4835 4832 * * 2631 * * * * 5105 5103 * * * * 5207 6491 6410 6034 632 87 32 * 5505 * * * * 6159 0 0 T 88 * * 6132 4536 2596 * * 2940 5851 3161 6309 * * 4763 6497 5198 4620 4281 * 1565 88 0 * * * * 1000 1000 6131 0 1579 S 89 5603 4638 3898 2464 * 4056 * 6454 3143 * 4642 5039 * 5762 * 1688 3431 * * 6124 89 24 * 5921 * * 0 * 6069 0 1000 L 90 * 5742 * 5732 4295 * * 1573 * 2605 4322 5466 * * * * 6351 1728 6447 6291 90 31 * 5552 * * 0 * 6020 0 1000 Q 91 6093 * 6183 1179 * * * * 3766 * * 3025 5238 4389 3494 2906 4747 * * * 91 0 * * * * 0 * 5797 0 1000 W 92 * * * * 3946 * * * * * * * * * * * * * 97 * 92 0 * * * * * * 5038 0 0 A 93 1329 4195 * 3856 * * * 5506 3271 4935 * * * 4415 * 2660 * 3122 * * 93 0 * * * * * * 4851 0 0 S 94 * * * * * 1079 * * 2788 * * 3668 * * 2348 3549 * * * 5558 94 0 * * * * * * 4835 0 0 L 95 * * * * * * * 2232 * 2513 1155 * * * * * * 2618 * * 95 0 * * 0 * * * 3985 0 0 //