HHsearch 1.5
NAME  c6wj6T_
FAM   
FILE  c6wj6T_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c6wj6T_.a3m 
DATE  Sat Aug 29 08:48:11 2020
LENG  29 match states, 29 columns in multiple alignment
FILT  2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.1 
EVD   0.5107  2.9536 
SEQ
>ss_dssp
CHHHHHHHHHHHHHHHHHHHHSCCCCCCC
>sa_dssp
EDEDEEEEEEEDEDEEEEEEDEEEEDEEE
>ss_pred
CCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>ss_conf
92123258999999999998733898899
>Consensus
esvayililtxaxxvlffaiafrepprie
>c6wj6T_
ESVAYILVLTMALAVLFFAIAFREPPRIE
>UniRef50_Q8Z0F9(2-30:35) Photosystem II reaction center protein T n=96 Tax=cellular organisms RepID=PSBT_ANASP  E=2e-06 s/c=1.84 id=83% cov=103%
ESVAYILILTLAIGVLFFAIAFREPPRIE
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
E 1    *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1
       0	*	*	*	*	*	*	1100	0	0	

S 2    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	2
       0	*	*	*	*	*	*	1100	0	0	

V 3    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	3
       0	*	*	*	*	*	*	1100	0	0	

A 4    0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	4
       0	*	*	*	*	*	*	1100	0	0	

Y 5    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	5
       0	*	*	*	*	*	*	1100	0	0	

I 6    *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	6
       0	*	*	*	*	*	*	1100	0	0	

L 7    *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	7
       0	*	*	*	*	*	*	1100	0	0	

V 8    *	*	*	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	1000	*	*	8
       0	*	*	*	*	*	*	1100	0	0	

L 9    *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	9
       0	*	*	*	*	*	*	1100	0	0	

T 10   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	10
       0	*	*	*	*	*	*	1100	0	0	

M 11   *	*	*	*	*	*	*	*	*	1000	1000	*	*	*	*	*	*	*	*	*	11
       0	*	*	*	*	*	*	1100	0	0	

A 12   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	12
       0	*	*	*	*	*	*	1100	0	0	

L 13   *	*	*	*	*	*	*	1000	*	1000	*	*	*	*	*	*	*	*	*	*	13
       0	*	*	*	*	*	*	1100	0	0	

A 14   1000	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1100	0	0	

V 15   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	15
       0	*	*	*	*	*	*	1100	0	0	

L 16   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	16
       0	*	*	*	*	*	*	1100	0	0	

F 17   *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1100	0	0	

F 18   *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	18
       0	*	*	*	*	*	*	1100	0	0	

A 19   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	19
       0	*	*	*	*	*	*	1100	0	0	

I 20   *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	1100	0	0	

A 21   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1100	0	0	

F 22   *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	22
       0	*	*	*	*	*	*	1100	0	0	

R 23   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	23
       0	*	*	*	*	*	*	1100	0	0	

E 24   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1100	0	0	

P 25   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	25
       0	*	*	*	*	*	*	1100	0	0	

P 26   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	26
       0	*	*	*	*	*	*	1100	0	0	

R 27   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	27
       0	*	*	*	*	*	*	1100	0	0	

I 28   *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	28
       0	*	*	*	*	*	*	1100	0	0	

E 29   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	29
       0	*	*	0	*	*	*	1100	0	0	

//