HHsearch 1.5 NAME c6uusE_ FAM FILE c6uusE_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6uusE_.a3m DATE Sat Apr 4 08:17:15 2020 LENG 111 match states, 111 columns in multiple alignment FILT 33 out of 37 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.5 EVD 0.3907 -2.3051 SEQ >ss_dssp CTTTHHHHHHHHHHHTTSSCSTTTTCHHHHHHHHHHHHHHHHHHSSSSSCCSSCHHHHHHHHHHHHTTSCSCCCCCCCCCCCCSTTTHHHHHHHHHHHHH HHHHHHHHHHC >sa_dssp DCDCBDDCBCEBDDCBEDCDEDCDDDDECCEECCCEBDECCBDBCEEEEDCCEBEDCDEDCDDCDEECCDEDEEEDEEEEEDEEEECEDEEDEDEEEEED EDDEEEEEEEE >ss_pred CHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH HHHHHHHHCCC >ss_conf 9035667579999999736964347866645559999999999997348877108899999999999930288887776798788899999999999999 99999876079 >Consensus xlxxlxxCxxxFxxxMxxvxxxxwCxWxxxxxxYxxLtxCtexxAxxxxcxxpNxLxdxfxxxIHxxfFxnCxxxxxxxxDPPxxIlxxlIxvPixltxx xvxLvvWxsKr >c6uusE_ MLERLPLCGKAFADMMGKVDVWKWCNLSEFIVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVHLEDPPDEVLIPLIVIPVVLTVA MAGLVVWRSKR >UniRef50_B5XDW1(55-160:163) Receptor activity-modifying protein 1 n=2 Tax=Salmo salar RepID=B5XDW1_SALSA E=7e-35 s/c=1.40 id=35% cov=96% ----LLICWDQFHSEMKDINKELWCEWDQVIRPYNELTKCIESLTTYLGCYFPNQVVQDFFIQIHSSFFQACPEEEELFPDAPSGVVLTLTLIPVSLIPI LVFLVVWKSK- >UniRef50_C3YBU4(45-132:140) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YBU4_BRAFL E=1e-10 s/c=0.76 id=27% cov=80% -----------------SVNISYICDWTQTIEPYSRVTKCAEAVSLTLNCTDRRRLFDVFMLDLHRRFFANCTPLQEPDFDAPDDVFAAAVAIPT--ILV WVAVFAW---- >UniRef50_UPI000176107D(53-143:161) PREDICTED: hypothetical protein n=1 Tax=Danio rerio RepID=UPI000176107D E=2e-06 s/c=0.59 id=27% cov=80% -------CVLPFKQNMETSDYQFNCPWPATRRYYAELMMCLETLAKftcCMHVSYRNRL----LMEIHELYFSICS--DTYLKDPAVPVLL-LLTVPCII VPFII--------- >UniRef50_C3ZX30(134-243:250) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZX30_BRAFL E=0.0007 s/c=0.41 id=25% cov=95% -LGMLQNCSDVFLGKVATMDQDSLCIWpGDQLGVYMELYDCVDY-AQAVTNYTESLLADEVLKRVHETAYGHCKgkyKREREPFDPPDSIFAVCVSVPAF LTfVAAVVLASW---- >UniRef50_O60894(38-143:148) Receptor activity-modifying protein 1 n=17 Tax=Tetrapoda RepID=RAMP1_HUMAN E=2e-34 s/c=1.38 id=35% cov=96% -----ELCLTQFQVDMEAVGETLWCDWGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGSILYPFIVVPITVTLL VTALVVWQSKR >UniRef50_Q4SK69(37-115:137) Chromosome 2 SCAF14570, whole genome shotgun sequence n=1 Tax=Tetraodon nigroviridis RepID=Q4SK69_TETNG E=3e-13 s/c=0.96 id=25% cov=72% -------CLSDFNTSLEMSDHQYSCPWPAVKPMYYKLKLCVDNLAITSSCMGHRSLGD-FFLKVHNMYFSSCGE----VRDPPLTTVILLI--------- ----------- >UniRef50_UPI000180BF13(54-153:161) PREDICTED: hypothetical protein n=1 Tax=Ciona intestinalis RepID=UPI000180BF13 E=4e-06 s/c=0.53 id=19% cov=60% ------ICLTSFARYSQNMTSQEICDFKLIWRPYDTLSRCINASTSNGNCWDRYALFDDVMRSVtHPQFFNHC--------------------------- ------------ >UniRef50_UPI000194DBE9(29-136:142) PREDICTED: receptor (G protein-coupled) activity modifying protein 2 n=2 Tax=Amniota RepID=UPI000194DBE9 E=8e-33 s/c=1.31 id=32% cov=98% --DMTEECWKYFVSLMGNVMTSELCEWKVISRPYSALQRCLEDWAESFNYSYPNALAEQYIFQSHHRYFHNCTLEQPVYFDPPEDVLLAMIIAPICLIPF LVTLVIWRSK- >UniRef50_C3ZVV6(33-140:149) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZVV6_BRAFL E=3e-20 s/c=0.92 id=26% cov=93% --EYLKYCTSIFVENLQKLgNESDICLWPDASSaamePYNHLTLCLGIAANETNCK-EMMLFNRFMLAIHRHFYSHCDTPPEKPKDAPKKIIASFVSLTT VTTLLAAGLL------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * 1912 446 * * * * * * * * * 1 0 * * * * * * 1641 0 0 L 2 * * * * * * * * * 0 * * * * * * * * * * 2 0 * * * * * * 2212 0 0 E 3 3459 * 2603 1199 * 2432 * * * * * * * * * * * * 3017 * 3 0 * * * * * * 2992 0 0 R 4 * * * 3017 * * * * 3312 * 1182 * * * 2699 * * * * 2466 4 0 * * * * * * 2992 0 0 L 5 * * * * * * * * * 498 4031 * * * * * 3205 3030 * * 5 0 * * * * * * 3474 0 0 P 6 * * * 1137 * * 3666 * 3267 3547 * * 2497 3323 * * * * * * 6 0 * * * * * * 3813 0 0 L 7 4538 * * 4151 2919 * * 3070 * 2074 * 3627 * * 3848 * 3976 3119 * 3593 7 0 * * * * * * 4097 0 0 C 8 * 0 * * * * * * * * * * * * * * * * * * 8 0 * * * * * * 4670 0 0 G 9 * * * * * 2200 * * * 1843 * 4778 * * * 4048 3127 4345 2040 * 9 0 * * * * * * 4735 0 0 K 10 3595 * 3323 2604 * * * * 2593 4345 * 5320 5238 4131 * 2687 3786 4636 * 4027 10 0 * * * * * * 4735 0 0 A 11 4439 * 3290 5272 * * 4141 3352 5057 * * 3642 3483 3396 3594 3329 5385 3510 * 3599 11 0 * * * * * * 4735 0 0 F 12 * * * * 224 * * * * * * * 4517 * * * * * * 3324 12 0 * * * * * * 4735 0 0 A 13 2572 * * 3352 * * 4663 * 1933 4048 * 4273 * 3385 5350 * * 2677 * 4517 13 0 * * * * * * 4735 0 0 D 14 5238 * 2690 2627 * 4048 4714 4981 3575 3911 * * * 4345 3012 3859 3706 4127 * * 14 0 * * * * * * 4735 0 0 M 15 3642 * 3533 2316 * * 4293 * 3534 5086 3348 3197 * 5320 * 3254 4194 5029 * 4524 15 0 * * * * * * 4735 0 0 M 16 * * * * * * * 4194 * 3164 543 * * * * 4524 * 4048 * 4517 16 0 * * * * * * 4735 0 0 G 17 4048 * 1948 2021 * 4286 * * 3449 * * * * 2660 * 3398 * 4714 * * 17 0 * * * * * * 4735 0 0 K 18 3591 * 4704 4999 * * 3729 * 2330 5334 4464 3413 5372 * * 2344 2645 5153 * * 18 0 * * * * * * 4680 0 0 V 19 * * * * * * * 2283 * 2454 2949 * * * 4800 3323 * 1528 * * 19 162 4101 4375 0 * * * 4680 1000 0 D 20 5483 * 1966 2868 * 2717 4204 * 3893 * 5049 2262 * * * * 3789 * * * 20 0 * * * * 986 1014 4875 0 1153 V 21 * * 4637 3520 * 5096 4459 4694 2743 5387 * * 3114 2921 4012 3354 5139 3381 * 4201 21 79 * 4238 * * 0 * 4701 0 1000 W 22 5017 * 3380 3719 * * * * 3071 * * * * 2037 3806 2981 2552 * 3925 * 22 0 * * * * 0 * 4875 0 1169 K 23 * * 2175 3185 4213 * * * 3463 2743 * 3987 * 4168 * 4130 4652 * 5109 2943 23 0 * * * * * * 4698 0 0 W 24 * * * * * * * 2954 * 2479 * 4408 * * * 3498 * * 847 * 24 0 * * * * * * 4890 0 0 C 25 * 41 * * * * * * * 5150 * * * * * * * * * * 25 0 * * * * * * 4890 0 0 N 26 * * 2122 2642 * * * 4165 * 3455 * 2065 3400 * * 3616 * 4386 * * 26 0 * * * * * * 4890 0 0 L 27 * * * * 4735 * * * * 1969 * * * * * * * * 500 * 27 147 3372 * 2417 299 * * 4890 1674 0 S 28 3131 * 4797 4035 * 2521 * 5150 3431 * * * 1975 * * 4011 2494 * * * 28 71 4386 * 0 * * * 4890 1000 0 E 29 3403 * 2700 2663 * * 4404 * 3636 4108 3686 3356 * 3720 5233 * * 3732 * 4188 29 0 * * * * * * 4743 0 0 F 30 4177 * * * 2429 * * 2495 * * * * * 3367 * * 2216 1892 * * 30 0 * * * * * * 4743 0 0 I 31 5129 * * * 5007 * * 1462 3629 3700 * * * * 4423 2106 4898 3812 4797 * 31 0 * * * * * * 4743 0 0 V 32 * * * 3923 * 2609 * * * * 4193 * 4384 3419 1547 2540 * 4058 * * 32 82 4177 * 2000 415 * * 4743 1000 0 Y 33 4923 * * 3816 * * * * * 4818 3709 * 1237 * * 2996 * 4288 * 2447 33 0 * * * * * * 4743 0 0 Y 34 * * * * * * * * * * * * * * * * * * * 0 34 0 * * * * * * 4743 0 0 E 35 3733 * 4070 3418 5508 3715 4407 * * * 4288 2692 * * 4346 2202 4451 * * 3208 35 0 * * * * * * 4743 0 0 S 36 4408 * 4274 1475 * * 4177 5007 4384 4407 * 3132 * * 3311 3504 4132 * * * 36 0 * * * * * * 4743 0 0 F 37 * * * * 2193 * * * * 505 4778 * * * * * * 4628 * * 37 0 * * * * * * 4743 0 0 T 38 3789 * * * * 4778 * * 4384 * 4423 * * 3695 3960 3091 1039 * * 4288 38 0 * * * * * * 4743 0 0 N 39 4451 * 2578 * * * * * 3265 2428 3651 2528 * 3120 3575 * * * * 4469 39 0 * * * * * * 4743 0 0 C 40 * 0 * * * * * * * * * * * * * * * * * * 40 0 * * * * * * 4743 0 0 T 41 3537 * * * * * 5508 3808 * 1837 * * * * * * 1179 3335 * * 41 68 * 4451 * * * * 4743 0 0 E 42 * * 3258 774 4065 3615 * * * 5225 * 4887 * * 4334 * * 5076 5093 * 42 0 * * * * 0 * 4570 0 1000 M 43 3319 * 4207 * 4898 * 2608 3055 4818 4286 4665 4384 * * 3705 4819 3280 3931 * 3771 43 76 * 4288 * * * * 4743 0 0 E 44 4070 * * 2611 4450 * 3587 5190 4313 2290 5180 5371 * * * 4739 * 2003 5213 * 44 0 * * * * 0 * 4625 0 1000 A 45 506 * * * 4818 * * * * * * * * * * 3005 3145 5470 * * 45 0 * * * * * * 4743 0 0 N 46 * * 2586 2769 * 4451 5278 4384 3827 3330 * 2556 * 3761 5394 4109 3798 * * * 46 69 4423 * 1585 585 * * 4743 1000 0 V 47 4288 3120 5007 4177 * * * 5569 2310 3082 5389 3504 * 5328 5419 5265 3501 4057 * 3798 47 0 * * * * * * 4743 0 0 V 48 4193 * * * 2866 4797 * 5419 * 1529 2750 * * * * 4384 4177 3133 * 4778 48 0 * * * * * * 4743 0 0 G 49 * * 3025 * * 2795 2968 * * 3870 * 1962 * 5436 * 2643 3367 * * * 49 0 * * * * * * 4743 0 0 C 50 * 629 * * 4451 * * 4818 * 3517 * 4288 * * * * * 3651 * 4207 50 0 * * * * * * 4743 0 0 Y 51 * * * * 1984 3517 * * 4177 * 4384 4451 3870 * * 3026 4628 * 4797 2038 51 82 * 4177 * * * * 4743 0 0 W 52 * * 3235 * 2957 4334 * * * 4355 * * * * * * 4158 * 1100 2795 52 0 * * * * 0 * 4622 0 1000 P 53 * * 4451 3231 * * 4384 * * * * * 611 5508 3023 * * * * * 53 0 * * * * * * 4743 0 0 N 54 * * * * * * * * * * 4177 565 * * 3501 2789 * * * 4797 54 0 * * * * * * 4743 0 0 P 55 2607 * * * * * 5129 * * 3072 4177 * 1535 3400 2781 4384 * * * * 55 32 5508 * 1000 1000 * * 4743 1000 0 L 56 5328 * 4778 4346 3870 * * * * 533 5295 * * 4451 5436 * * 4819 * * 56 69 * 4423 * * * * 4743 0 0 A 57 1631 * * * 2873 4267 * 4823 * * * * * * 5471 * * 1382 * 4403 57 0 * * * * * 0 4659 0 1000 Q 58 * * 1229 1508 * * 5279 * * * * 4128 * 2849 * * * * * * 58 77 * 4267 * * * 0 4659 0 1000 G 59 4735 * 2616 2556 * 4376 4872 * 4242 * * * * 3964 2832 2249 5216 4256 * * 59 0 * * * * 965 1036 4325 0 1513 F 60 * * * * 792 * * 3246 4783 4823 * * * * * * * 3127 * 2931 60 0 * * * * 0 * 4659 0 1000 I 61 * * * * 1413 * * 1612 * 3354 2326 * * * * * * * * * 61 0 * * * * * * 4743 0 0 T 62 * * * * 3066 * * 2186 3367 1872 4423 * * * 4797 * 3124 3422 * * 62 0 * * * * * * 4743 0 0 G 63 2915 * 3200 2900 * 2640 4898 * 4384 * * * * 3481 2759 4109 * 4290 * 4778 63 0 * * * * * * 4743 0 0 I 64 5504 * * * * * * 979 * 3757 * * * * * 4207 3937 1851 * * 64 53 4797 * 0 * * * 4743 1000 0 H 65 * * * * * * 0 * * * * * * * * * * * * * 65 0 * * * * * * 4743 0 0 R 66 4923 * * 3354 * 5233 4207 * 2696 5504 * 4384 4797 2658 1929 3798 4818 * * * 66 0 * * * * * * 4743 0 0 Q 67 * * 4898 * 5278 * 2475 3916 3188 3263 4384 5508 * 2943 2634 4819 3571 * * * 67 0 * * * * * * 4743 0 0 F 68 4288 * * * 1200 * 3212 * * * * * * * * * * * * 1302 68 0 * * * * * * 4743 0 0 F 69 * * * * 238 * * * * * * * * * * * * * * 2716 69 0 * * * * * * 4743 0 0 S 70 2959 * * * * 4288 2514 * 4303 5007 * 4797 * 3975 2940 1584 * * * * 70 0 * * * * * * 4743 0 0 N 71 4819 * 2972 * * * 2084 4423 * * * 1059 * * * 3747 * * * * 71 0 * * * * * * 4743 0 0 C 72 * 0 * * * * * * * * * * * * * * * * * * 72 0 * * * * * * 4743 0 0 T 73 4001 * 4061 * * 4504 4468 * 4088 * * * 2406 * * 1758 2028 * * * 73 171 4088 4233 1585 585 * * 4630 1000 0 V 74 4092 * 4448 3526 * * * 5077 3954 1689 * 4352 4322 * 4528 5233 2824 3406 * * 74 140 4448 4426 0 * * 0 4439 1000 1000 D 75 * * 3252 1826 * 4954 * * * 4088 * * 3942 * 2592 3125 3290 3756 * * 75 0 * * * * 1036 965 4169 0 1513 R 76 4714 * 4176 2426 * 2271 * * 5244 * * 3706 4019 2143 3446 5043 * * * * 76 117 * 3683 * * * 0 4444 0 1000 V 77 * * * 2544 * * * 5073 * * * * 2904 4185 1565 * 3526 2431 * * 77 0 * * * * * 0 4288 0 1952 H 78 3011 * * 3944 * 4373 2650 5210 3351 2763 * * 4094 5430 * * 3281 3560 * 4019 78 0 * * * * 0 * 4288 0 1952 L 79 * * 4416 4468 3184 * * 5367 * 1532 * * 2755 * * * * 3334 3320 3636 79 0 * * * * * * 4630 0 0 E 80 5085 5363 * 2835 2265 * 5263 * 3145 * * 4802 4680 3198 2911 3812 * 3819 * * 80 0 * * * * * * 4630 0 0 D 81 * * 0 * * * * * * * * * * * * * * * * * 81 0 * * * * * * 4630 0 0 P 82 2423 * * * * * * * * * * * 298 * * * * * * * 82 0 * * * * * * 4630 0 0 P 83 4233 * * * * * * * * * * * 79 * * * * * * * 83 0 * * * * * * 4630 0 0 D 84 * * 1749 2370 5085 5134 * 4709 4061 4504 * 5263 3843 * 5232 3196 * 4233 * 5367 84 0 * * * * * * 4630 0 0 E 85 4802 * 1896 3046 * 3649 5367 * 3589 * * 5403 3597 * 3959 2534 4504 * * * 85 0 * * * * * * 4630 0 0 V 86 * * * * * * * 975 * 4618 * * * * * * 3122 1575 * * 86 0 * * * * * * 4630 0 0 L 87 * * * * 3243 * * 3415 * 701 * * * * * * * 2431 * * 87 0 * * * * * * 4630 0 0 I 88 1992 3248 * * 4802 3959 * 2844 * 1843 * * * * * * 3819 5278 * 5134 88 79 * 4233 * * * * 4630 0 0 P 89 1300 * * * * * * 4339 * 4426 * * 1865 * * 3411 4634 3489 * * 89 0 * * * * 0 * 4439 0 1000 L 90 4416 3266 * * 1955 * * * * 1189 2711 * * * * * * * * * 90 0 * * * * * * 4630 0 0 I 91 * * * * * * * 769 * 4233 * * * * * * 3649 1834 * * 91 0 * * * * * * 4630 0 0 V 92 2772 * * * 5015 4633 * 2342 * 2231 4714 * * * * 2996 4176 2705 * * 92 0 * * * * * * 4444 0 0 I 93 2294 * * * * * * 1941 * 4019 * * * * * * 3683 1336 * * 93 0 * * * * * * 4444 0 0 P 94 * * * * * * * * * * * * 92 * * * 4019 * * * 94 0 * * * * * * 4444 0 0 V 95 3834 4116 * * * * * 1146 * * * * * * * * 2997 1761 * * 95 88 * 4075 * * * * 4222 0 0 V 96 * 1969 * * 2665 * * 4067 * 2188 4054 * * * * 3445 4921 3026 * * 96 0 * * * * * 0 4276 0 1000 L 97 * * * * * * * 3436 * 650 * * * * * * 3747 2352 * * 97 0 * * * * 0 * 4276 0 1000 T 98 * * * * * * * 1375 * * * * * * * * 845 4116 * * 98 105 3834 * 0 * * * 4222 1000 0 V 99 * 4013 * * * * * * * 1191 * * 1381 * * * * 3108 * * 99 0 * * * * * * 4222 0 0 A 100 1851 * * * 2203 * * 4572 * 1839 * * * * * * * 2442 * * 100 0 * * * * * * 4222 0 0 M 101 2878 * * * 5360 * * 4116 * 2496 1270 * 4485 * * * * 3540 4075 * 101 0 * * * * * * 4222 0 0 A 102 3161 * * * * * * 2184 * 4485 * * * * * * 2083 1368 * * 102 0 * * * * * * 4222 0 0 G 103 1665 * * * 4501 2824 * * * * 3931 * * * * 4542 2335 2784 * 4399 103 0 * * * * * * 4098 0 0 L 104 * * * * * * * * * 94 * * * * * * * 3982 * * 104 0 * * * * * * 4098 0 0 V 105 3725 * * * 3982 * * * * 3862 3695 * * * * * * 484 * * 105 0 * * * * * * 4098 0 0 V 106 3218 * * * * * * 3051 * * * * * * * 3558 * 542 * * 106 0 * * * * * * 3956 0 0 W 107 * * * * 4432 * * * * 4475 * * * * * * * * 138 * 107 0 * * * * * * 3956 0 0 R 108 * 2539 * * * * * * 2167 * * * * 4554 990 4081 * * * * 108 0 * * * * * * 3614 0 0 S 109 4703 * * * * 4047 * * * * * * * * * 347 3123 * * * 109 0 * * * * * * 3530 0 0 K 110 * * * * * * * * 0 * * * * * * * * * * * 110 0 * * * * * * 3524 0 0 R 111 * * * * * * * * * * * * * * 0 * * * * * 111 0 * * 0 * * * 2494 0 0 //