HHsearch 1.5 NAME c6swgA_ FAM FILE c6swgA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6swgA_.a3m DATE Sat Aug 8 08:23:33 2020 LENG 72 match states, 72 columns in multiple alignment FILT 13 out of 17 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.5 EVD 0.4198 0.4135 SEQ >ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC >sa_dssp EEDEECCEECCEDBEDECEECCDDCCEEBEDECEEDEEDDEECCEDCEEDCEDCBEEBEDDCEECDEEDDEE >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 924799999999999999987689999999998418413455589999999999999999999999996349 >Consensus xxrxxxixxKkkeiExxyrqDCETfgxVvkMLixKDpsLExxlxxaLxEnlxexxerciexlxxfIxxxdxx >c6swgA_ TTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTS >UniRef50_Q5XGT7(262-333:338) LOC495144 protein n=5 Tax=Tetrapoda RepID=Q5XGT7_XENLA E=1e-28 s/c=1.76 id=79% cov=101% TSRSRAIAAKTKEIEEVYRQDCETFGMVVKMLIDKDPALEKQIQFALRQNLSEIGERCIEELKMYITEYDAA >UniRef50_B9EN32(196-266:280) Periphilin-1 n=1 Tax=Salmo salar RepID=B9EN32_SALSA E=2e-23 s/c=1.55 id=64% cov=100% AARNRTIQQKRKEIEQVYRQDCDTFGVVVKMLIAKDPSLEQPIQSSLQENLREIGLRCVEAMQEFIEEYDS- >UniRef50_Q9CZ70(239-310:312) Putative uncharacterized protein n=7 Tax=Murinae RepID=Q9CZ70_MOUSE E=4e-23 s/c=1.50 id=77% cov=101% TNRRKAIVSKTKEIEQAYYQDCETFGMVVKMLVEKDASLERPIQFALRQNLHELSERCVEELRQFIADYDAA >UniRef50_C3YVD2(481-546:551) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YVD2_BRAFL E=5e-21 s/c=1.55 id=51% cov=93% ----KQIRKKRREIEEAYRQDCETIGTVCKMLITKDPSIEEKLSPALKECLKDLGDRCIQELKDAIKTLE-- >UniRef50_A8PSR1(523-583:589) Putative uncharacterized protein n=2 Tax=Brugia malayi RepID=A8PSR1_BRUMA E=1e-14 s/c=1.32 id=35% cov=86% --------TKKKQLEGAFKADRETFGFVTKMLIEKDPGLEDRLWLALAEAIKDMEEAFTRKMDQYLDQL--- >UniRef50_C4QD77(637-700:716) Expressed protein n=8 Tax=Schistosoma RepID=C4QD77_SCHMA E=7e-17 s/c=1.38 id=41% cov=89% ------IRDRKDALAEDYKRDCEAFTTVVRMLISKDQDLESRLMPMLKEILHERGQRCIEDLRTFISDH--- >UniRef50_A8Y0A7(539-598:601) Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8Y0A7_CAEBR E=8e-13 s/c=1.25 id=25% cov=85% ---------QKKKFETAFRNDCETYAVVTRALLAKDESLQFGLKTSLLENMEDLYKKMLQRVDDHLDAL--- >UniRef50_UPI00016E973A(190-326:328) UPI00016E973A related cluster n=2 Tax=Takifugu rubripes RepID=UPI00016E973A E=7e-44 s/c=0.74 id=64% cov=101% ERRALAIAAKAQEIEKVYRQDCETFGMVVKMLVAKDPNLEKQLQVPLRENLGEIRERCLEDLRHFINELDEA >UniRef50_Q8R1X0(288-359:368) BC022960 protein (Fragment) n=18 Tax=Euteleostomi RepID=Q8R1X0_MOUSE E=4e-24 s/c=1.42 id=71% cov=101% SSRTKAIISKTKQIEEVYLQYCETFAIVVKMLLDKDPSLQKSIQFALRQNLQEMSERCVEELNCFITEYDNS # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 2926 * * 1982 * * * * * * * * * * * 2721 1109 * * * 1 0 * * * * * * 1734 0 0 T 2 2009 * * * * * * * * * * 2921 * * 1982 1901 3341 * * * 2 0 * * * * * * 1734 0 0 R 3 * * * * * * * * * * * * * * 0 * * * * * 3 0 * * * * * * 1734 0 0 S 4 1982 * * * * * * * * * * 2009 * * 2921 2219 2721 * * * 4 0 * * * * * * 1734 0 0 K 5 * * * * * * * * 1023 3243 * * * 3222 1761 * * * * * 5 0 * * * * * * 1879 0 0 A 6 486 * * * * * * * * * * * * 2486 * * 3217 * * * 6 0 * * * * * * 1879 0 0 I 7 * * * * * * * 0 * * * * * * * * * * * * 7 0 * * * * * * 2117 0 0 A 8 1658 * * * * * * 3179 * * * * * 2548 1649 * * 3593 * * 8 0 * * * * * * 2117 0 0 S 9 2266 * 2738 * * * * * 3115 * * * * 2832 * 2181 2591 * * * 9 0 * * * * * * 2381 0 0 K 10 * * * * * * * * 387 * * * * 3198 2984 * * * * * 10 0 * * * * * * 2662 0 0 T 11 3020 * * * * * * * 1173 * * * * * 2286 * 2130 * * * 11 0 * * * * * * 2662 0 0 K 12 * * 2984 * * * * * 723 * * * * 4065 2266 * * * * * 12 0 * * * * * * 2662 0 0 E 13 2984 * * 1047 * * * * 3198 * * * * 1832 * * * * * * 13 0 * * * * * * 2662 0 0 I 14 * * * * 3198 * * 845 * 1580 * * * * * * * * * * 14 0 * * * * * * 2662 0 0 E 15 2984 * * 195 * * * * * * * * * * * * * * * * 15 0 * * * * * * 2662 0 0 Q 16 * * * 1541 * 3022 * * 3020 * * * * 2211 * 3558 3198 * * * 16 0 * * * * * * 2662 0 0 V 17 1106 * 2984 * * * * * * * * * * * * * * 1289 * * 17 0 * * * * * * 2662 0 0 Y 18 * * * * 1658 * * * * * * * * * * * * * * 550 18 0 * * * * * * 2662 0 0 R 19 * * * * * * * * 2003 3781 * * * * 687 * * * * 4139 19 0 * * * * * * 2662 0 0 Q 20 3022 * * * * * * * * * * 2367 * 845 2984 * * * * * 20 0 * * * * * * 2662 0 0 D 21 * * 109 * * * * * * * * * * * * * * * * 3781 21 0 * * * * * * 2662 0 0 C 22 * 190 * * * * * * * * * * * * 3022 * * * * * 22 0 * * * * * * 2662 0 0 E 23 * * 3129 175 * * * * * * * * * * * * * * * * 23 0 * * * * * * 2662 0 0 T 24 2984 * * * * * * * * * * * * * * * 195 * * * 24 0 * * * * * * 2662 0 0 F 25 * * * * 483 * * 3462 * * * * * * * * * * * 2367 25 0 * * * * * * 2662 0 0 G 26 1907 * * * * 720 * * * * * * * * * * 2984 * * * 26 0 * * * * * * 2662 0 0 M 27 * * * * 3022 * * 3781 * * 1842 * * * * * 2203 1698 * * 27 0 * * * * * * 2662 0 0 V 28 * * * * * * * * * * * * * * * * * 0 * * 28 0 * * * * * * 2662 0 0 V 29 * 3462 * * * * * * * * * * * * * * 1658 756 * * 29 0 * * * * * * 2662 0 0 K 30 * * * * * * * * 557 * * * * * 1643 * * * * * 30 0 * * * * * * 2662 0 0 M 31 2367 * * * * * * * * * 311 * * * * * * * * * 31 0 * * * * * * 2662 0 0 L 32 * * * * * * * * * 0 * * * * * * * * * * 32 0 * * * * * * 2662 0 0 I 33 * * * * * * * 854 * 1907 * * * * * * * 2474 * * 33 0 * * * * * * 2662 0 0 E 34 1443 * 2981 2153 * * * * * * * * * * * 2397 3462 * * * 34 0 * * * * * * 2662 0 0 K 35 * * * * * * * * 0 * * * * * * * * * * * 35 0 * * * * * * 2662 0 0 D 36 * * 95 3978 * * * * * * * * * * * * * * * * 36 0 * * * * * * 2662 0 0 P 37 4139 * * 2367 * * * * * * * * 683 2984 * * * * * * 37 0 * * * * * * 2662 0 0 S 38 4214 * 2984 * * 3022 * * * * * 4065 * * * 651 * * * * 38 0 * * * * * * 2662 0 0 L 39 * * * * * * * 3462 * 137 * * * * * * * * * * 39 0 * * * * * * 2662 0 0 E 40 * * * 447 * * * * * * * * * 1907 * * * * * * 40 0 * * * * * * 2662 0 0 K 41 * * 3022 3462 2367 * * * 1762 * * * * 4045 3178 2984 * * * * 41 0 * * * * * * 2662 0 0 S 42 * * * * * 2367 3978 * 3462 * * * 2548 3137 2003 3086 * * * * 42 0 * * * * * * 2662 0 0 I 43 * * * * * * * 1545 * 605 * * * * * * * * * * 43 0 * * * * * * 2662 0 0 Q 44 * * * * * * * * 2367 * 2984 * * 1102 * 3462 * * 3022 * 44 0 * * * * * * 2662 0 0 F 45 * * * * 2130 * * * * 3022 3558 3978 1884 * * 4045 3198 4065 * * 45 0 * * * * * * 2662 0 0 A 46 924 * * * * * * * * * 2984 * 3020 * * 2163 * * * * 46 0 * * * * * * 2662 0 0 L 47 * * * * * * * * * 0 * * * * * * * * * * 47 0 * * * * * * 2662 0 0 R 48 3022 * * * * * * * 1581 2367 * * * 4045 1795 * * * * * 48 0 * * * * * * 2662 0 0 Q 49 * * * 374 * * * * * * * * * 2130 * * * * * * 49 0 * * * * * * 2662 0 0 N 50 3022 3462 * * * * * 2984 * * * 600 * * * * * * * * 50 0 * * * * * * 2662 0 0 L 51 * * * * * * * 3022 * 550 2367 * * * * * * * * * 51 0 * * * * * * 2662 0 0 H 52 * * * 2367 * 3139 2132 3978 2225 * * * * 3781 4045 4214 * * * * 52 0 * * * * * * 2662 0 0 E 53 * * 1294 756 * * * * * * * * * * * * * * * * 53 0 * * * * * * 2662 0 0 I 54 * * * * * * * 1572 * 1551 2352 * * * 2984 * * * * * 54 0 * * * * * * 2662 0 0 G 55 * * * 3022 * 1217 * * * * * * * * 3020 2949 * * * 2367 55 0 * * * * * * 2662 0 0 E 56 * * 3462 1075 * * * * 2367 3129 * * * 2984 * * * * * * 56 0 * * * * * * 2662 0 0 R 57 3022 * * * * * * * 2367 * * * * * 550 * * * * * 57 0 * * * * * * 2662 0 0 C 58 * 550 * * 3022 * * * * * 2367 * * * * * * * * * 58 0 * * * * * * 2662 0 0 V 59 * * * * * * * 1884 * 2107 3558 * * * * * 3022 1792 * * 59 0 * * * * * * 2662 0 0 E 60 * * * 756 * * * * * * * * * 1813 3022 * * * * * 60 0 * * * * * * 2662 0 0 E 61 3129 * 2002 1648 * * * * 3022 * * * * * 2367 * * * * * 61 0 * * * * * * 2662 0 0 L 62 * * * * * * * * * 814 2074 * * * * * * 2367 * * 62 0 * * * * * * 2662 0 0 K 63 * * 1658 * * * * * 2399 * * 3781 * 2492 2042 * * * * * 63 0 * * * * * * 2662 0 0 H 64 * 3781 1813 4045 * * 2571 * * * 4214 * * 2098 * * 2984 * * * 64 0 * * * * * * 2662 0 0 F 65 3374 * * * 833 * 2700 * * * * * * * * * * * * 2410 65 0 * * * * * * 2677 0 0 I 66 * * * * * * * 487 * 1804 * * * * * * * * * * 66 0 * * * * * * 2677 0 0 A 67 2547 * 1804 3067 * * * * 3374 * * 4011 * * * 2930 2906 * * * 67 0 * * * * * * 2677 0 0 E 68 2700 * 2395 1228 * * * * * * * * * 2915 * * 3374 * * * 68 0 * * * * * * 2677 0 0 Y 69 * * * * * * 2930 * * 970 * * * * * * * * * 1480 69 0 * * * * * * 2677 0 0 D 70 * * 284 2486 * * * * * * * * * * * * * * * * 70 0 * * * * * * 1879 0 0 T 71 1866 * * 2570 * * * * * * * 2605 * * * 2779 2016 * * * 71 0 * * * * * * 1719 0 0 S 72 695 * * * * * * * * * * * * * * 1388 * * * * 72 0 * * 0 * * * 1554 0 0 //