HHsearch 1.5 NAME c6sw9Y_ FAM FILE c6sw9Y_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6sw9Y_.a3m DATE Sat Feb 22 08:28:20 2020 LENG 50 match states, 50 columns in multiple alignment FILT 33 out of 37 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.8 EVD 0.4285 1.2038 SEQ >ss_dssp CCCCCCCSCBCSSCBCCSSCCCSSSSTTCCCCCCSSCCCTTTTCCCSCCC >sa_dssp EDEEEEECEEEEEEEEDEBDEBEEEDEDECBBEDEDDCBBEEDDCDBEDE >ss_pred CCCEEEEEEEECCEEEECHHCCCCCCCCEEEECCCCCCCCCCCCCCEECC >ss_conf 97503659951987886000488745856861066723136531121209 >Consensus xxxxxxxYxvdxgkvxrxxkxCpxCGxGxFmAxHxDRxxCGkCgxTexkk >c6sw9Y_ MGQKWKLYIVKDGKVIRKNKFCPRCGPGVFMADHGDRWACGRCGYTEWKK >UniRef50_D2EF30(12-57:61) Ribosomal protein S27a n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EF30_9EURY E=4e-09 s/c=1.37 id=49% cov=94% ----WKMYKIEGSTITKVNHTCPKCGEGTFLAEHNNRLTCGRCGYTEFKK >UniRef50_A0RUP3(7-55:55) 30S ribosomal protein S27ae n=2 Tax=cellular organisms RepID=RS27A_CENSY E=3e-10 s/c=1.35 id=44% cov=100% -GGVHRFYKIEDGKTVKLRHICSRCGKGFFMAQHKDRRSCGKCGLTEFNQ >UniRef50_A8BNY1(96-135:137) Putative uncharacterized protein n=2 Tax=Giardia intestinalis RepID=A8BNY1_GIALA E=3e-09 s/c=1.57 id=44% cov=82% -----KYYTIKGDTAEPTREYCPNCGPGIRIARHADRCHCGRCGF----- >UniRef50_A9BK41(98-140:141) Rps27A n=1 Tax=Cryptophyta RepID=A9BK41_9CRYP E=8e-09 s/c=1.43 id=43% cov=88% ------YYSVDDGKIKKLRRESPQ-SPGSFMAEHSDRLTCGKTGLTLVRK >UniRef50_Q6A1P6(105-147:177) Putative uncharacterized protein n=1 Tax=Euplotes vannus RepID=Q6A1P6_EUPVA E=2e-05 s/c=1.17 id=35% cov=86% ------YFEVDkNGKIEKLKQESPE-QAGCYLADHKDRMHCGKTGYMFYK- >UniRef50_Q4CXN0(160-207:211) Ubiquitin/ribosomal protein S27a, putative n=14 Tax=Trypanosomatidae RepID=Q4CXN0_TRYCR E=2e-09 s/c=1.32 id=49% cov=90% --KYFKVTENDDGsfKVERTRDECPNpvCGAGVFMAQHKDRKYCGKCHLT---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 1000 0 0 G 2 * * * * * 0 * * * * * * * * * * * * * * 2 0 * * * * * * 1465 0 0 Q 3 * * * * * 2438 * * 587 * * * * 2739 * * * * * * 3 0 * * * * * * 2098 0 0 K 4 * * * * * * * * 1179 * * * * * 1726 * * 2985 * 2944 4 0 * * * * * * 2290 0 0 W 5 * * * * 2437 * 2004 * * * * * * * * 1844 * * 2503 3172 5 0 * * * * * * 2442 0 0 K 6 3182 * 4034 2351 * * * * 1133 * * * * 4950 2790 * * * * * 6 0 * * * * * * 2753 0 0 L 7 * * * * 2318 * * * * 2336 3882 * * * * * * 4606 * 1022 7 0 * * * * * * 2894 0 0 Y 8 * * * * 3430 * * * * * * * * * * * 4659 * * 205 8 0 * * * * * * 2934 0 0 I 9 * * 3863 2346 * * 4563 5401 1265 * * * * 4475 * 4916 3420 4541 * 4720 9 58 * 4673 * * * * 2934 0 0 V 10 * * 4874 * * * * 1959 * 3009 * 4632 * * * 4668 * 986 * * 10 59 4650 * 0 * 0 * 2910 1000 1000 K 11 * * 856 2416 * * * * 2197 * * * * * * 4575 * * * * 11 365 2161 * 0 * * * 2933 1951 0 D 12 * * 1691 3783 * 1422 * * * * * 2614 * 3626 * * * * * * 12 67 4455 * 0 * * * 2933 1265 0 G 13 * * 2669 4626 * 667 * * * * * 3130 * * * 4102 * * * * 13 36 5334 * 1000 1000 * * 2937 1000 0 K 14 * * * * * * * * 524 * * * * * * 3038 2451 * * * 14 40 * 5191 * * * * 2937 0 0 V 15 3452 * * * * * * 1807 * 4993 * * * * * * 3312 1027 * * 15 0 * * * * * 0 2930 0 1000 I 16 * * 4693 2046 4715 * 4486 3982 3134 * * * * 5785 * 3514 2186 2902 * * 16 0 * * * * * 0 2930 0 1000 R 17 3841 * * * * * * * 2356 3817 * * 3665 * 878 * 4607 * * * 17 57 * 4693 * * 0 * 2930 0 1000 K 18 * * * 3978 * * * 3742 2679 1360 * * * 3515 4567 4597 3154 4939 * * 18 0 * * * * * 0 2901 0 1000 N 19 * * * * * 5237 4597 * 2180 3789 * 2809 * 3984 1207 * * * * * 19 48 * 4932 * * 0 * 2901 0 1000 K 20 * * 5302 3091 * * 4061 * 1200 * * * 3784 3841 2186 * * * * * 20 0 * * * * * 0 2927 0 1000 F 21 3695 4815 5001 1496 3513 4982 * 3845 4610 * 4749 * * 3874 * 5280 4146 4842 * 4343 21 0 * * * * 0 * 2927 0 1000 C 22 * 171 * * * * * * * * * * * * * 3161 * * * * 22 69 4418 * 1000 1000 * * 2937 1241 0 P 23 5028 * 4763 5144 * * * * * * * * 382 * * 4020 4496 5026 * * 23 113 3734 * 1000 1000 * * 2937 1379 0 R 24 * * 4694 4539 * * 5177 * 3395 * * 2061 * 3748 1278 4318 5700 * * * 24 376 3087 3161 1000 1000 * * 2937 1452 0 C 25 * 0 * * * * * * * * * * * * * * * * * * 25 92 * 4018 * * 0 * 2842 0 1657 G 26 4739 * * * * 301 * * * * * * * 4428 * 3263 * * * * 26 50 * 4869 * * 0 * 2943 0 1157 P 27 1864 * 3414 4304 * 5160 * * 3033 * * 3784 1997 * 5001 4610 * 4815 * * 27 167 * 3197 * * 0 * 2927 0 1000 G 28 4934 * 4748 * * 105 * * * * * * * * * * * * * * 28 0 * * * * 688 1399 2850 0 1609 V 29 * 2525 * * 5139 * * 3584 * * * * * * * 3463 2619 1117 * * 29 0 * * * * 0 * 2898 0 1000 F 30 * * * * 328 * * 4619 * 4763 * * * * 4366 * * * * 3691 30 0 * * * * * * 2937 0 0 M 31 * * * * * * * 4366 * 1601 686 * * * * * * * * * 31 0 * * * * * * 2937 0 0 A 32 113 * * * * 4620 * * * * * * * * * 4860 * * * * 32 0 * * * * * * 2937 0 0 D 33 3910 * 2736 1971 * * 4619 * 3552 * * 3734 * 3182 4366 3008 * 4496 * * 33 0 * * * * * * 2937 0 0 H 34 * * * * * * 65 * * * 4496 * * * * * * * * * 34 60 4619 * 1585 585 * * 2937 1000 0 G 35 3305 * 4809 3560 2860 3222 * * 1681 4067 * 3288 * * * 5052 * * * 5093 35 0 * * * * * * 2937 0 0 D 36 * * 374 4619 * * * * * * * 2415 * * * * * * * * 36 83 4160 * 0 * * * 2937 1155 0 R 37 * * * * * * * * * * * * * * 0 * * * * * 37 0 * * * * * * 2937 0 0 W 38 * 4366 4763 5506 4620 * 2822 4694 5334 2605 3582 4860 * 3040 4444 * 5019 * 3716 3468 38 0 * * * * * * 2937 0 0 A 39 3204 * * * * * 2739 * * * * * * * * 2385 2447 4809 * 1595 39 0 * * * * * * 2937 0 0 C 40 * 0 * * * * * * * * * * * * * * * * * * 40 0 * * * * * * 2937 0 0 G 41 * * * * * 0 * * * * * * * * * * * * * * 41 0 * * * * * * 2937 0 0 R 42 * * * * * * * * 604 * * 4160 * * 1805 * * * * * 42 0 * * * * * * 2937 0 0 C 43 * 171 * * * * * * * * * * * * * * 3161 * * * 43 0 * * * * * * 2937 0 0 G 44 * 5469 * * * 608 1896 * * * * * * 5019 * * 5506 * * * 44 0 * * * * * * 2937 0 0 Y 45 * * 5095 * 3586 * * * * 1450 * * * * * 4489 * * * 1068 45 0 * * * * * * 2943 0 0 T 46 * * * * * * * * * 4701 3748 * * * * * 173 * * * 46 0 * * * * * * 2876 0 0 E 47 * * * 580 3119 * * 3147 * 4192 * * * * * * * 4368 * * 47 0 * * * * * * 2840 0 0 W 48 * * 4368 * 1655 * * * * 4144 4021 * * * * * 4284 4192 1951 2727 48 0 * * * * * * 2840 0 0 K 49 * * * 2873 * * * * 399 * * 4353 * * 4146 * * * * * 49 0 * * * * * * 2800 0 0 K 50 * * * 3394 * * * * 672 * * * * 1851 * * * * * * 50 0 * * 0 * * * 2522 0 0 //