HHsearch 1.5 NAME c6r6oB_ FAM FILE c6r6oB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6r6oB_.a3m DATE Sat Oct 5 08:19:15 2019 LENG 100 match states, 100 columns in multiple alignment FILT 123 out of 792 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.7 EVD 0.3900 -0.9267 SEQ >ss_dssp CCCCCCCCGGGCHHHHHTTTTSCGGGSHHHHHTTTTTCCHHHHHHTCCCTTCHHHHTTCCHHHHHHHHHHCBTTBCCCBTTBCHHHHHHHHHHHHHTTCC >sa_dssp DEECEEEEEEEBADCCBECEECEDECBCDCCBBEDAEBBEDAEEDECDDBCCEEBBEECDDEDBCDCBCEBEEECCDBEEDBDEECACCBACBBCDCCEE >ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCC >ss_conf 9743356656871789998999987311562179999875433345322110234331000111122102210012210128899999999999850479 >Consensus xxxxxxxxxxxxxxxixagxxxxxqxnCaxCHGxxGxGxxxxxxxxxpxxxxxxxxxxxxxxxixxxixxgxxxMPxfxxxLsxeqIxxlxxYIrslxxx >c6r6oB_ LNEHTAGDTTKSPYTIYAGLGFAVQESCYYCHGNGGKGTTEGLIFGVPDFTSTEFQSSMTDKQIIDHINKGKGKCPSYQGKMSPEMIEKMAGVVRNFAVK >UniRef50_A9BB52(62-129:130) Cytochrome cM n=3 Tax=Prochlorococcus marinus RepID=A9BB52_PROM4 E=8e-06 s/c=0.76 id=24% cov=38% ----------------------------------------------------------LSDERIINQVIKGlTPPMPSFE--MDPQSMADLLSYLHSL-- - >UniRef50_D2QQD4(158-249:271) Cytochrome c class I n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QQD4_9SPHI E=6e-09 s/c=0.67 id=21% cov=87% INENNV-TAVKDAKALDAGKAVFLQ-SCVACH------GQQGQGGVGPNLTDEFWLHGGSVKSVFRTITEgvPEKGMMSWKKQLNPLQVQQVASYI---- -- >UniRef50_Q6MML6(97-190:193) Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MML6_BDEBA E=4e-07 s/c=0.59 id=21% cov=81% --------------TLIVGQKFY-ETNCALCHGYKGEGGEAakstisAKMALKPPAVVSDKVKGWTDGHLYHVITVGQGVMGPYASHIPQQYRWQVVNYI R----- >UniRef50_C7HZ74(318-404:429) Gluconate 2-dehydrogenase (Acceptor) n=3 Tax=Thiomonas intermedia K12 RepID=C7HZ74_THIIN E=3e-06 s/c=0.61 id=20% cov=82% ---------------LHSAGSLAYAQYCAVCHQNDGEGAAGVFPAMAGNPTVESRDALNLIHVILAGGKTAEVKgvhpftMPAFAGVLSDQQVADIATFV RS---- >UniRef50_B1WTZ1(33-104:115) Cytochrome c family protein n=6 Tax=Chroococcales RepID=B1WTZ1_CYAA5 E=0.0001 s/c=0.66 id=20% cov=65% ---------------------------CAGCHPNGNNIIRRGKNLKMKALKRN---KVDTLDAVINIVTYGKNNMSAYEERLTQDEIKMVSQYV------ >UniRef50_A6CA06(232-333:336) Cytochrome c oxidase subunit 2 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CA06_9PLAN E=7e-10 s/c=0.64 id=20% cov=92% ----AAADIHKNKNPIEAGEYFYKSRGCIQCHSLDGSiikgpsfkglfGSERTFADGTTRIADANYITQSILEPQSQVVANFPPVMPTFKGQLKDEDIRA IIAFIR----- >UniRef50_A8DJF4(108-199:221) Cytochrome c subfamily protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJF4_9BACT E=3e-08 s/c=0.65 id=22% cov=88% ----------RDPVEIYREGRALFQNNCVGCHGHNGCGNVPHSTNFTDpgWQENNSDGGIYSSIYNGKGIGNGGGAMPAYYNQLSSKQIRYLVAYLRAF- -- >UniRef50_B8GPE7(203-304:307) Cytochrome c oxidase cbb3-type, subunit III n=2 Tax=Thioalkalivibrio RepID=B8GPE7_THISH E=0.0006 s/c=0.44 id=18% cov=76% -----------------------AEGGCFQCHNVGGVGRTSQGAPNltnniwqIIDVPNAADHDARVELVKSVLRNGIQRQMPAFADRLSPIEIKVLTAY VHQLG-- >UniRef50_B6BHK9(4-97:101) Cytochrome c, class I n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BHK9_9PROT E=8e-05 s/c=0.51 id=18% cov=95% INKVLLGLAVVGSLTVAAADGASLYNKCAACHGTTGEKKALGKSAVIKGWEATKTVEALNGYKAGTYGGAMKGLMKGQVNSLNDSQIEALAKYI------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * 492 * 1791 * * * * * * * * * * 1 0 * * * * * * 2528 0 0 N 2 * * * * * * * * * * * 0 * * * * * * * * 2 0 * * * * * * 3001 0 0 E 3 * * * 1116 * * * * 1404 * * * * 2639 * * * * * * 3 0 * * * * * * 3339 0 0 H 4 * * 2710 * * * 1222 * * * * 3102 * * * 3049 * 2464 * * 4 0 * * * * * * 3686 0 0 T 5 1980 * * * * * * * * 2000 * 2513 * * * * 3232 3297 * 3143 5 0 * * * * * * 4300 0 0 A 6 1492 * * * * 3588 * * 3333 3127 * * * * * 3540 3195 2713 * * 6 112 * 3737 * * * * 4542 0 0 G 7 1848 * * * * 809 * * * * * 2724 * * * * * * * * 7 0 * * * * 0 * 4618 0 1000 D 8 * * 1602 3395 * 4277 * * * 2539 * * 3639 3948 3865 * 2857 * * * 8 0 * * * * * * 4887 0 0 T 9 1802 * * 4234 * * * 3842 4162 * * * 4263 * * 2333 1817 * * * 9 0 * * * * * * 5606 0 0 T 10 4085 * 3848 * * 4342 3819 * * * * 3861 * * * 2628 1340 2989 * * 10 58 * 4666 * * * * 5999 0 0 K 11 * * 4533 * 4479 * * 4574 1467 * * 4539 3564 2858 4148 3977 4271 3817 * * 11 0 * * * * 0 * 5985 0 1000 S 12 3232 * 2403 3799 * 4234 * 4378 * * * 3632 * * * 1639 2948 * * * 12 0 * * * * * * 6913 0 0 P 13 2749 * * 4018 * 3259 * * 3022 * * * 1184 * * 4277 5096 4604 * * 13 0 * * * * * * 6645 0 0 Y 14 2661 * 4081 4353 3655 * 3196 4131 4109 3085 * 4557 4884 * * 3998 * 3251 * 3867 14 0 * * * * * * 6645 0 0 T 15 3062 * 5270 3935 * * * * 4500 4031 4200 5400 2654 * * 4214 2164 2560 * * 15 0 * * * * * * 6736 0 0 I 16 * * * * 5221 * * 1452 * 1347 * * * * * * * 2220 * * 16 0 * * * * * * 6780 0 0 Y 17 2675 * 5431 2873 * * 4931 5019 5130 5040 * * 3981 2685 5356 4110 3903 * * 2373 17 0 * * * * * * 6780 0 0 A 18 912 * 5337 3388 * 5291 * * * 4957 * 5570 * * 3671 3236 4855 4316 * * 18 0 * * * * * * 7595 0 0 G 19 3528 * * 4407 * 566 * * 4785 * * 4006 * * 5119 3975 * * * * 19 147 * 3365 * * * * 7291 0 0 L 20 2893 * 4688 2618 * 3018 * * 3044 3569 4293 * 4422 3834 3444 5196 5435 5343 * * 20 0 * * * * 344 2237 7833 0 2632 G 21 3206 * 4963 5219 * 1851 * * 2317 4815 * 4477 * 4641 3748 3473 * 4585 * 5154 21 34 * 5427 * * * 0 7372 0 1000 F 22 2647 * * 5861 2446 5218 5681 2721 3954 2247 * * 5460 4032 5617 * * 4005 * * 22 92 5507 4646 0 * 874 1138 7346 1000 1550 A 23 1392 * * * 3191 * * 3978 * 3737 * * * * 4826 4823 5958 3365 * 2417 23 187 5668 3297 2807 222 513 1740 7303 1000 2026 V 24 2866 * * 4588 2866 4937 * 5584 3218 3399 * 5138 * 4477 5736 5271 4383 3970 * 2331 24 125 4710 4489 0 * 485 1808 7496 1510 3252 Q 25 4129 * 4678 2675 5027 4338 6232 * 3882 * 6352 4220 * 1574 4364 4579 6137 4962 5933 5002 25 62 5001 6508 0 * 367 2155 8294 1585 2374 E 26 3148 * 3759 2806 * 4437 5262 6191 2909 4753 * 3456 * 3013 4384 4188 4230 5137 * 6089 26 59 5053 6687 1563 596 0 * 8409 1605 1609 S 27 3691 6759 * 5596 6271 3102 4858 6466 4732 5825 7128 1290 * * 6610 3545 4588 5863 7254 3560 27 0 * * * * 0 * 8498 0 1000 C 28 * 0 * * * * * * * * * * * * * * * * * * 28 0 * * * * * * 8622 0 0 Y 29 1459 * 6047 * 5773 5746 * 3903 5175 4024 5460 * * 5438 6119 2734 3764 3245 6915 5034 29 0 * * * * * * 8622 0 0 Y 30 1999 * * 6562 5506 3058 5174 5324 4491 5393 7503 5517 3718 4010 4747 2976 4377 3867 * 5071 30 0 * * * * * * 8628 0 0 C 31 * 0 * * * * * * * * * * * * * * * * * * 31 0 * * * * * * 8628 0 0 H 32 * * * * * * 0 * * * * * * * * * * * * * 32 65 5126 6034 1224 806 * * 8628 2346 0 G 33 3484 * 5965 * * 583 * * 6981 6362 4328 5796 6735 4928 5367 4423 5265 * * * 33 35 5401 * 1000 1000 * 0 8624 2109 1520 N 34 2685 * 4568 4093 6040 4283 5230 4850 3931 3526 4861 4496 3128 4164 5797 5221 4326 3446 6647 5776 34 33 5472 * 1000 1000 * 0 8624 2026 1520 G 35 4273 * 1792 3429 * 2456 7135 * 4081 * * 2523 6125 5114 7064 4820 4563 5990 * * 35 14 6687 * 1000 1000 915 1090 8624 1000 1520 G 36 3445 * 5936 6859 * 419 5448 * 7004 4531 7142 5717 6607 * 5334 * * * * * 36 10 7128 * 1585 585 * 0 8629 1000 1000 K 37 3787 6446 3369 2528 * 4454 * * 2860 5284 5515 4067 6549 3854 3840 4041 3393 5672 * 5057 37 83 4332 7300 2368 311 * 0 8629 2845 1000 G 38 4622 * * 7129 * 313 * 5895 6198 6303 * * 4889 7557 6755 5584 * 4843 * * 38 77 5902 4832 2833 218 984 1016 8630 1745 1554 T 39 3644 * 3273 7112 5852 3692 6663 4239 3892 4572 4498 2833 3956 4275 4953 4724 3214 4209 6667 * 39 29 7150 6317 1585 585 1341 724 8612 1000 3088 T 40 3281 * 4646 4069 * 1788 * 4793 4183 5282 * 5634 3851 5330 4435 5214 3066 3570 * * 40 135 3744 6079 2283 332 * 0 8576 3946 2948 E 41 2977 * 5571 5138 6097 2679 5316 5640 4509 4275 5203 4701 2556 3812 3470 4819 5266 4777 5871 * 41 166 3445 5876 1915 445 2884 210 8581 4227 3406 G 42 2737 * 6791 4619 * 2169 5541 3998 6817 4682 * 3545 4292 3990 5159 4914 3973 3811 4696 6410 42 76 6844 4561 2322 322 1240 794 8560 1000 3788 L 43 3096 * 5022 4920 5056 3022 * 5691 3024 3159 5774 5637 3313 4191 4210 3541 6857 4293 6940 6591 43 0 * * * * * 0 9259 0 4099 I 44 2997 * * 5683 4156 3598 6003 4242 3924 3269 4980 3706 3835 5337 4981 3942 3584 4687 * 4145 44 44 5042 * 2055 397 3052 185 9259 2196 4099 F 45 3679 * 4974 * 2934 4048 * 6561 5968 2445 4755 4026 3010 6645 4090 4961 4309 5818 5751 3670 45 109 3945 7014 1993 417 2281 332 9261 4001 3975 G 46 4557 * 5672 4963 4911 1836 6803 6758 3380 5612 4811 4188 2663 5483 5458 4594 4498 4935 6635 4802 46 46 5523 6689 2431 296 1309 745 9246 1677 3647 V 47 2798 * 6276 5644 4611 3946 4817 3431 4988 3800 5273 4339 2901 6092 5060 4094 4566 3633 7264 4494 47 28 6538 6862 0 * 281 2497 9226 1000 3199 P 48 4059 * 4286 6328 4933 5067 * 5527 3464 4314 6983 * 1203 * 3640 5810 4052 4510 * 7207 48 91 4037 * 2004 414 * 0 8608 3684 1677 D 49 2823 * 2002 4329 6521 3828 5898 6826 5200 5941 * 3225 3162 5421 5432 3792 4923 5849 5561 * 49 47 6025 5910 666 1436 * 0 8599 1669 1677 F 50 3890 * 6664 6149 2800 3884 4386 5094 6757 1785 6180 * 3487 4383 * 4842 * 4194 4554 4730 50 28 6427 7095 2000 415 1966 427 8592 1000 2561 T 51 2738 * 5381 4547 5010 7187 4566 6697 4588 3626 6758 4295 4489 5573 4020 3030 2478 3782 * 6801 51 83 4721 5799 1408 682 1880 457 8595 2448 2517 S 52 3116 * 2149 4188 6945 4619 4663 5726 4492 4511 * 3126 5324 5490 4085 3664 5274 3981 * 5638 52 93 4003 * 1279 766 2206 352 8599 2760 3003 T 53 2712 6907 2987 3909 6499 4667 5757 * 5915 4487 * 3292 4064 5852 5008 3288 3250 4012 * 4777 53 34 6197 6669 2322 322 1986 420 8595 1000 2682 E 54 2864 * 2589 2982 7213 3294 * 4811 3281 7243 * 4810 6541 4574 5582 4073 4178 * 5122 3978 54 36 * 5362 * * 968 1033 8579 0 2659 F 55 4651 * 4952 5611 3148 6793 4596 4214 3913 3556 4356 4135 4938 5706 4082 5250 5029 5352 3197 2921 55 24 * 5924 * * 1366 709 8584 0 2918 Q 56 5148 * 3836 4954 7165 5489 5577 4281 4274 2551 4980 4455 6299 3294 3894 6738 3190 3411 6026 4108 56 35 * 5385 * * 651 1462 8533 0 2849 S 57 3867 * 3878 5229 7027 4235 4300 5206 2859 5461 5507 4828 5370 4832 3184 3232 4725 3580 5742 3955 57 36 5344 * 1690 535 340 2253 8539 2212 2627 S 58 3280 * 3312 3268 * 2469 5986 5111 4842 5204 * 3795 * 3748 4999 3175 4008 4197 * * 58 33 * 5484 * * * 0 8597 0 1000 M 59 3081 * 4449 5343 7078 4351 5073 3528 3792 2762 4569 4432 5393 4556 3839 4211 4360 5155 6848 4188 59 21 7241 7007 1000 1000 * 0 8605 1000 2340 T 60 5275 6502 3390 5330 * 5485 * 3814 5117 3690 5691 4627 3475 6755 7110 2321 2395 3965 * 5467 60 11 7033 * 2322 322 * 0 8602 1000 2752 D 61 3782 * 1662 3378 * 4879 4930 4089 5213 4956 5499 5166 3766 5379 4974 4351 4999 3821 * * 61 16 6494 * 0 * 847 1171 8602 1000 2752 K 62 3821 * 4102 2673 5336 2259 5975 6413 3547 4266 6560 3811 6906 4146 6446 3610 4821 5845 * 5472 62 0 * * * * 0 * 8594 0 1612 Q 63 3288 * 3673 3763 4885 5259 4778 5082 4548 5521 6652 5016 4818 3338 3543 3809 4448 4214 4696 3565 63 15 6624 * 0 * * * 8613 1000 0 I 64 4582 * 6367 5421 4185 5711 6508 1717 4928 2167 4398 6393 6736 4968 5946 6718 * 3132 * 4730 64 11 * 7067 * * * * 8544 0 0 I 65 3630 * 5285 6630 2645 3954 5494 3073 4519 3647 5700 6780 6268 5718 4458 4683 3994 3448 6045 3638 65 0 * * * * * 0 8537 0 1000 D 66 3625 * 3156 3635 7060 4006 3907 4807 3628 5812 6573 3754 6255 4642 3319 4964 3767 4739 5064 4484 66 24 * 5905 * * * 0 8537 0 1000 H 67 3501 * * * 6018 3281 4403 3332 5565 4182 5667 5580 5435 4684 3934 3596 3401 2583 6597 4382 67 14 * 6706 * * * 0 8536 0 2229 I 68 5396 * 5456 * 5779 4433 5082 996 5848 4166 4955 6589 5488 5453 4921 * 4681 2999 * * 68 51 5293 6754 2525 275 * 0 8523 2286 2528 N 69 4772 * 7277 5197 * 3578 5559 7023 2534 3862 4800 3295 6525 6897 4162 3343 2344 4788 6538 5631 69 13 6776 * 2585 263 2214 350 8508 1000 2850 K 70 4954 * 3678 4417 6035 3239 4189 5726 4837 5366 * 1911 6292 4215 6773 4042 3611 6286 6699 3607 70 111 3941 6855 2169 363 0 * 8512 3428 2542 G 71 4184 * * * 5779 817 6491 6469 4694 6549 6185 4867 3133 * 5659 * 4561 6669 * 4227 71 87 4429 6381 1821 480 0 * 8536 2781 1000 K 72 3532 * 4346 4546 4003 5011 4515 4317 3294 5250 5667 4476 4215 3219 3307 3782 4849 4420 * 5321 72 70 4408 * 1133 878 * 0 8288 3232 1000 G 73 4126 * 6100 5635 * 1459 5829 * 4894 6650 6554 2700 4814 4609 3730 3728 4379 5168 * 6042 73 78 4255 * 937 1066 * 0 8288 3368 1000 K 74 2833 * 4568 5951 7634 3090 6293 4280 3016 3769 4995 3579 5098 4250 4179 4913 5708 3397 * 5760 74 145 3391 * 2311 325 0 * 8288 4254 1000 C 75 5391 5755 * 6296 * 6522 * * * * 143 * * * * * 6042 6236 * * 75 0 * * * * * * 8313 0 0 P 76 5147 * * * 6854 4005 * 5308 5001 * 4045 * 504 6500 5334 5836 6811 * * 5920 76 0 * * * * * * 8313 0 0 S 77 1698 * 5585 7634 * 2727 * * 6565 6711 5225 5569 2578 * 6047 2221 5213 5454 * * 77 0 * * * * * * 8313 0 0 Y 78 4819 * * * 1294 * 5794 5334 6336 5370 6260 * 6042 5621 * 6714 * 5764 2525 2137 78 51 4836 * 1632 562 * * 8313 2286 0 Q 79 2279 * 6156 3197 * 2526 5627 5710 2563 4813 * 5423 * 3856 4197 4989 * 5545 6027 4721 79 42 * 5131 * * * * 8313 0 0 G 80 4401 * 2477 3891 * 1763 6553 6321 3589 * * 4179 4861 5302 6274 3631 4422 * 4863 6032 80 25 * 5843 * * 611 1535 8273 0 2244 K 81 4889 * 4257 4847 * * 5185 5549 2499 5750 5451 3837 6244 2877 2466 4211 4827 3483 6137 5733 81 33 5454 * 2371 310 0 * 8274 1609 2263 M 82 7571 * * * 4328 * * 3016 * 672 3110 * * * * * 6047 3997 * * 82 29 5631 * 622 1514 * * 8313 1637 0 S 83 4839 * 3945 4074 * 4677 * * 3891 * * 3883 4148 5745 8333 1342 2366 * * * 83 0 * * * * * * 8313 0 0 P 84 5946 * 1554 3233 * 6703 * * 5883 * 6321 4501 1636 3982 6225 5510 7692 5136 * * 84 0 * * * * * * 8157 0 0 E 85 3433 * 2919 1526 * 5593 * 5609 3540 4818 * 6642 * 3228 4062 4265 5756 6821 * 6753 85 0 * * * * * * 8164 0 0 M 86 * * 2232 1641 * * * * 6936 6408 6390 * * 1386 5737 6284 6722 * * 6526 86 0 * * * * * * 7927 0 0 I 87 6768 * * * * * * 800 6395 3569 4258 * * * 3136 * 6202 2830 * * 87 0 * * * * * * 7927 0 0 E 88 2426 6905 3051 2695 5949 7694 6903 * 3205 5197 6768 4282 * 4418 4406 5270 5749 6483 2689 * 88 0 * * * * * * 7920 0 0 K 89 1684 * 2584 3236 * 6016 5949 * 3963 6335 5628 5681 * 3319 6591 3430 5041 5573 * 6227 89 0 * * * * * * 7920 0 0 M 90 * * * * * * * 2328 * 1024 6374 * * * * * 5714 1846 * * 90 0 * * * * * * 7918 0 0 A 91 1491 * * * 5776 6177 * 3148 * 3436 6580 * * * * 4144 4297 1790 * * 91 0 * * * * * * 7918 0 0 G 92 1541 * 5408 4548 * 4388 3876 6406 4854 5925 * 3242 5482 3863 * 3694 3418 4930 * 6501 92 0 * * * * * * 7918 0 0 V 93 * * * * 2736 * 5083 6456 * 7251 * * * * * * 6193 4837 4623 488 93 17 6456 * 0 * * * 7909 1000 0 V 94 * * * * 5809 * * 1407 * 2602 4374 * * * * * * 1351 * * 94 0 * * * * * * 7909 0 0 R 95 4905 * * 4617 * * 5185 * 1970 4917 5125 * * 5309 891 * 5887 * * * 95 0 * * * * * * 7727 0 0 N 96 4967 * 6162 * * 3734 4722 * 6004 * * 2654 * 4799 * 1175 2521 * * 6225 96 0 * * * * * * 7572 0 0 F 97 5645 * * * 1977 * * 4028 * 769 * * * 4701 * * * 4661 * * 97 0 * * * * * * 7142 0 0 A 98 1309 * * * * 2577 * 4490 3306 * * * * 4644 4126 2754 4727 * * * 98 0 * * * * * * 5938 0 0 V 99 2942 * * 2842 * 3943 * 3837 3947 * * * 2670 * * * 3874 2188 * 3543 99 0 * * * * * * 4916 0 0 K 100 * * * 2059 * * * * 741 * * * * * 2631 * * * * * 100 0 * * 0 * * * 4569 0 0 //