HHsearch 1.5 NAME c6igzE_ FAM FILE c6igzE_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6igzE_.a3m DATE Sat Feb 16 08:14:01 2019 LENG 61 match states, 61 columns in multiple alignment FILT 19 out of 23 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.0 EVD 0.4668 2.5206 SEQ >ss_dssp CCCTTCEEEECCSSSSSTTCEEEEEECCSSCCSSCEEEECSSCCSSSCCEEEECTTTEEEC >sa_dssp ECEEDCEADADCEEDDBDEDDBEBDCCDEEEDEDBACADBECECEEEDDDDEAADECBEDE >ss_pred CCCCCCEEEEECCCCEEECCCCCEEEECCCCCEEEEEEEECCCEEECCCCCCCCHHHHHCC >ss_conf 9877754898443111221354189970457342269996010140314778688785209 >Consensus gpkrgskVrIxRxESYWynxvGtVvsvdxxgixYpVxVRFdkvNYxgvxtnnfaxxElexv >c6igzE_ GPKRGSRVKILRPESYWYNRAGKVVSCDQTGIKYPVTVRFEDVNYAGVSTNNFGLQEVEEL >UniRef50_Q9S714(83-144:145) Photosystem I reaction center subunit IV B, chloroplastic n=50 Tax=cellular organisms RepID=PSAE2_ARATH E=1e-15 s/c=1.35 id=65% cov=102% GPKRGSKVKILRKESYWYKNVGSVVAVDQDpKTRYPVVVRFAKVNYANISTNNYALDEVEEV >UniRef50_A8G2Z0(5-68:69) Photosystem I reaction center subunit IV n=3 Tax=root RepID=PSAE_PROM2 E=1e-11 s/c=1.11 id=62% cov=95% ---RGDFVRIKRPESYWYNEIGKVASIDKTGIKYNCTVRFDKCNYAGISgtaegatTNMFAESELEK- >UniRef50_UPI0001C3358B(3-56:72) Photosystem I reaction centre subunit IV / PsaE n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C3358B E=2e-07 s/c=1.05 id=52% cov=89% --KRKDKVRVKRKESYWYNDVGTVVTIDKgDSLLYPVVVRFEKVNYIGLSGDPSGL------ >UniRef50_Q7V8Y4(5-67:68) Photosystem I reaction center subunit IV n=16 Tax=Cyanobacteria RepID=PSAE_PROMM E=2e-13 s/c=1.22 id=52% cov=92% ---KGDKVRIRREESYWHNEVGTVASVDTTG-KYGVLVRFEKTNYFGMQgtdngnlTNSFAESELD-- >UniRef50_Q5ENQ0(59-120:120) Chloroplast photosystem I protein E (Fragment) n=1 Tax=Heterocapsa triquetra RepID=Q5ENQ0_HETTR E=2e-18 s/c=1.51 id=61% cov=102% GPKKGSTVKILRPESYWFQQKGTVVNVNQKAeVKYPVTVKFDAVNYANVNTNGYALWEVEEV >UniRef50_P12352(1-97:97) Photosystem I reaction center subunit IV, chloroplastic n=5 Tax=Viridiplantae RepID=PSAE_CHLRE E=2e-37 s/c=1.02 id=69% cov=102% GPKRGSLVKILRPESYWFNQVGKVVSVDQSGVRYPVVVRFENQNYAGVTTNNYALDEVVAA >UniRef50_Q85FZ1(3-62:94) Photosystem I iron-sulfur center subunit VII n=2 Tax=Eukaryota RepID=Q85FZ1_CYAME E=2e-18 s/c=1.50 id=53% cov=98% --KKGSLVKILRPESFWYNEVGTVVNVETSKVLYPVLVRFDKVNYSGLNSTNFSLDELVEI >UniRef50_B7KGR9(3-61:123) Photosystem I reaction centre subunit IV/PsaE n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KGR9_CYAP7 E=2e-22 s/c=1.67 id=67% cov=98% --QRGSKVRILRKESYWYNDIGVVASVDKSGILYPVIVRFDKVNYAGVTTNNFGTHEVEEV >UniRef50_B7K1T0(3-68:69) Photosystem I reaction center subunit IV n=7 Tax=cellular organisms RepID=PSAE_CYAP8 E=1e-17 s/c=1.50 id=55% cov=98% --KRGDKVRIKRKESYWYGDVGTVASVDKAGILYPVIVRFNTVNYnglsgsaGGINTNNFAESELEVI # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1589 0 0 P 2 * * * * * * * * * * * * 0 * * * * * * * 2 0 * * * * * * 1673 0 0 K 3 * * * * * * * * 422 * 4195 * * 2329 * * * * * * 3 0 * * * * * * 1980 0 0 R 4 * * * * * * * * 2173 * * * * * 362 * * * * * 4 0 * * * * * * 2062 0 0 G 5 * * * * * 250 * * 3071 * * * * * 4644 * * * * * 5 0 * * * * * * 2062 0 0 S 6 3401 * 1447 * * * * * * * * * * * * 893 * * * * 6 0 * * * * * * 2062 0 0 R 7 * * * * 3019 * * 4203 792 3103 * * * * 4322 * 3671 * * * 7 0 * * * * * * 2062 0 0 V 8 * * * * * * * * * * * * * * * * * 0 * * 8 0 * * * * * * 2062 0 0 K 9 * * * * * * * * 1160 * * * * * 856 * * * * * 9 0 * * * * * * 2062 0 0 I 10 * * * * * * * 373 * * * * * * * * * 2133 * * 10 0 * * * * * * 2062 0 0 L 11 * * * * * * * * 2159 846 4394 3990 * * 3196 * * * * * 11 0 * * * * * * 2062 0 0 R 12 * * * * * * * * * * * * * * 0 * * * * * 12 0 * * * * * * 2062 0 0 P 13 * * * 3798 * * * * 1337 * * * 1065 * 4203 * * * * * 13 0 * * * * * * 2062 0 0 E 14 * * * 94 * * * * * * * * * * * * * * * 3990 14 0 * * * * * * 2062 0 0 S 15 * * * * * * * * * * * * * * * 0 * * * * 15 0 * * * * * * 2062 0 0 Y 16 * * * * 3811 * * * * * * * * * * * * * * 107 16 0 * * * * * * 2062 0 0 W 17 * * * * * * * * * * * * * * * * * * 0 * 17 0 * * * * * * 2062 0 0 Y 18 * * * * 1798 * 3798 * * * * * * * * * * * * 643 18 0 * * * * * * 2062 0 0 N 19 * * * * * 4490 * * 3427 * * 534 * 3091 4193 * * * * * 19 0 * * * * * * 2062 0 0 R 20 * * 1490 1865 * 4394 * * * * * 3206 * 3016 3474 * * * * * 20 0 * * * * * * 2062 0 0 A 21 4322 * * * * * * 2785 3671 * * * * * * * 4203 573 * * 21 0 * * * * * * 2062 0 0 G 22 * * * * * 0 * * * * * * * * * * * * * * 22 0 * * * * * * 2062 0 0 K 23 * * * * * * * * 1874 * * * * * * 2911 864 4486 * * 23 0 * * * * * * 2062 0 0 V 24 * * * * * * * * * * * * * * * * * 0 * * 24 0 * * * * * * 2062 0 0 V 25 1374 * * * * * * * * * * * * * * * * 703 * * 25 0 * * * * * * 2062 0 0 S 26 2308 * * * * * * * * * * 2739 * * * 1031 2653 * * * 26 0 * * * * * * 2062 0 0 C 27 * 4322 * * * * * 2206 * * 4644 * * * * * * 528 * * 27 0 * * * * * * 2062 0 0 D 28 * * 234 3811 * * * * * * * 3671 * * * * * * * * 28 0 * * * * * * 2062 0 0 Q 29 * * * * * * * * 1896 * * * * 1011 * * 2089 * * * 29 290 2458 * 0 * * * 2062 1450 0 T 30 3339 * 1667 * * * * * 3671 * * * * * * 1620 2455 * * * 30 299 2417 * 0 * * * 2062 1399 0 G 31 3671 * * * * 741 * * 2292 * * * * * * 3071 * * * * 31 235 3671 3798 0 * * * 2062 1000 0 I 32 * * * * * * * 1105 * 2974 * * * * * * 2848 1895 * * 32 0 * * * * 0 * 2014 0 1000 K 33 * * * * * * * * 1585 1333 * * * * 1891 * * * * * 33 0 * * * * * * 2062 0 0 Y 34 * * * * 3990 * * * * * * * * * * * * * * 94 34 0 * * * * * * 2062 0 0 P 35 * * * * * 3798 * * * * * 4048 205 * * * * * * * 35 0 * * * * * * 2062 0 0 V 36 * 4048 * * * * * * * * * * * * * * * 90 * * 36 0 * * * * * * 2062 0 0 T 37 * * * * * * * 2371 * 2804 * * * * * * 1952 1304 * * 37 0 * * * * * * 2064 0 0 V 38 * * * * * * * * * * * * * * * * * 0 * * 38 0 * * * * * * 2064 0 0 R 39 * * * * * * * * 3654 * * * * * 119 * * * * * 39 0 * * * * * * 2064 0 0 F 40 * * * * 0 * * * * * * * * * * * * * * * 40 0 * * * * * * 2064 0 0 E 41 4368 * 1070 1421 * * * * * * * 3297 * * * * * * * * 41 0 * * * * * * 2064 0 0 D 42 3654 * 4160 * * * * * 495 * * 4395 * * * 4000 4472 * * * 42 0 * * * * * * 2064 0 0 V 43 * 4044 * * * * * 4130 * * * * * 4395 * * 3800 390 * * 43 0 * * * * * * 2064 0 0 N 44 * * * * * * * * * * * 0 * * * * * * * * 44 0 * * * * * * 2064 0 0 Y 45 * * * * * * * * * * * * * * * * * * * 0 45 281 2500 * 2807 222 * * 2064 1361 0 A 46 961 * * * 3800 3022 * 3909 * * * * * * * 2576 * * * 4130 46 0 * * * * * * 2064 0 0 G 47 * * * * * 399 * * * * * 2049 * * * * * * * * 47 0 * * * * * * 2064 0 0 V 48 * * * * * * * 1763 * 2383 3800 * * * * * * 1178 * * 48 0 * * * * * * 2064 0 0 S 49 * * * * * * * * * * * 1226 * 3800 * 1304 3381 * * * 49 205 2917 * 2807 222 * * 2064 1264 0 T 50 * * * * * 3909 * * * * 4220 * * * * 3807 307 * * * 50 0 * * * * * * 2064 0 0 N 51 * * 3909 * * * * * * * * 214 * * * * 3807 * * * 51 0 * * * * * * 2064 0 0 N 52 * * * * * 3654 * * * * 4044 724 3909 4000 * 2995 * * * * 52 0 * * * * * * 2064 0 0 F 53 * * * * 628 * * * * * * * * * * 3909 * * * 1805 53 0 * * * * * * 2064 0 0 G 54 630 * * * * 2548 * * * * * * * * 4130 2993 * * * * 54 0 * * * * * * 2064 0 0 L 55 * * * 1449 * * * * * 1034 * * 4206 * * * 4367 4552 * * 55 0 * * * * * * 2064 0 0 Q 56 3591 * 1101 * * * 4276 * * * * * * 4091 * 1951 * * 3609 * 56 0 * * * * * * 2025 0 0 E 57 * * * 0 * * * * * * * * * * * * * * * * 57 0 * * * * * * 2025 0 0 V 58 * * * * * * * 4075 * 780 * * * * * * * 1481 * * 58 0 * * * * * * 2025 0 0 E 59 * * 3082 712 * * * 4487 * * * * * 3340 * * * 2963 * * 59 0 * * * * * * 2025 0 0 E 60 3733 * * 882 * * * * 3478 * * * * * * * * 1774 * * 60 0 * * * * * * 1978 0 0 L 61 3588 * * * * * * 2480 * 3508 * * * * * * * 622 * * 61 0 * * 0 * * * 1928 0 0 //