HHsearch 1.5 NAME c6hu9j_ FAM FILE c6hu9j_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6hu9j_.a3m DATE Sat Dec 29 08:19:34 2018 LENG 77 match states, 77 columns in multiple alignment FILT 72 out of 76 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.7 EVD 0.4235 -0.6335 SEQ >ss_dssp CCSCCCCCCTTCCSSCCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTCCCSCCCCC >sa_dssp EEEEEDEECEDCDEEECDEBBCCBABCCCCBDDEDCECEEDBDECDDBBDEDBDEEDBEEBCECCEEEEBECECEEE >ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC >ss_conf 98425899875899889999999999999999972877255799999999729899999999999808988443689 >Consensus xxlxtxpxDxRfPxxnqrkxCwxxrdxyxkClxxxgedxxxCxxxxxxyexxCpxsWVexfxexRexgtfxxxxxxx >c6hu9j_ SPLHTVGFDARFPQQNQTKHCWQSYVDYHKCVNMKGEDFAPCKVFWKTYNALCPLDWIEKWDDQREKGIFAGDINSD >UniRef50_B7QNQ1(3-68:82) Cytochrome C oxidase, subunit VIb/COX12, putative n=2 Tax=Ixodidae RepID=B7QNQ1_IXOSC E=0.0006 s/c=0.69 id=30% cov=87% -----------FPNKEQRQKCWDSRDRYWECLDRNPDDPSPCAKIKAEYQSLCPSQWVKHFNRKREYLKFKDKIENE >UniRef50_B7FUS0(13-81:91) Predicted protein (Fragment) n=3 Tax=stramenopiles RepID=B7FUS0_PHATR E=6e-17 s/c=1.28 id=39% cov=91% --VRTTPRDERFPSSNQALHCWNRYNEWLLCVKQSG-DEDNCKPMRQFAESICPGIWLESFDEQRDDGSFSG----- >UniRef50_A8XZV6(9-75:555) Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8XZV6_CAEBR E=8e-08 s/c=0.87 id=24% cov=53% ------------------RKCYEARDKYVDCIDKflaqgknEQEAEKACRAERKGFNGNCPTSWV------------------- >UniRef50_Q9LPJ2(59-109:304) F6N18.10 n=2 Tax=Arabidopsis thaliana RepID=Q9LPJ2_ARATH E=7e-11 s/c=1.34 id=31% cov=68% -----AAVEERFPVTNETRHCFNRFMQYHKCIEKNGRDANDCNNLRDYVRSICPEE--------------------- >UniRef50_Q0U111(61-136:167) Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0U111_PHANO E=6e-13 s/c=0.99 id=23% cov=84% -PAKTSGGAFEQPNRSNRKQCYAARDAFFECLDKNnvldsintksGREKAQtfCGQLDQEFEKNCAHSWVEYFKKQR------------ >UniRef50_A8PRT9(12-72:591) Putative uncharacterized protein n=1 Tax=Brugia malayi RepID=A8PRT9_BRUMA E=1e-11 s/c=1.16 id=28% cov=52% -------------------KCYQSRDEYFKCCEQYKTySESKCKKLKQKFEKDCPASWV------------------- >UniRef50_B6KRC8(115-180:191) Putative uncharacterized protein n=3 Tax=Toxoplasma gondii RepID=B6KRC8_TOXGO E=3e-14 s/c=1.20 id=33% cov=87% --------DPRSMQFNQMNTCSLRYAMFARCAKELGDDHTRCKYQFYRAQVACPIEQIELWEDYRQKGTCHFDL--- >UniRef50_Q9BL34(48-120:121) Putative uncharacterized protein n=2 Tax=Caenorhabditis RepID=Q9BL34_CAEEL E=3e-17 s/c=1.23 id=38% cov=96% --LWAAPYDARFPQVRKQRQCFAYYVDFHRCNELMGQDYKPCKFFQNVYKDFCPGFWTERWDELLSEGRFPAKFD-- >UniRef50_C4Q820(23-94:94) Cytochrome C oxidase polypeptide vib, putative n=2 Tax=Schistosoma mansoni RepID=C4Q820_SCHMA E=5e-16 s/c=1.18 id=38% cov=95% --MKIVPYDSRFPNTNQTPKCVQNFVDFQRCKRIYGEEYKACNYFMRTAQLLCPSSWIEKWEREVENNVLPYKI--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 0 * * * * 1 0 * * * * * * 1461 0 0 P 2 * * * * * * * * * * * * 0 * * * * * * * 2 0 * * * * * * 2060 0 0 L 3 3111 * * * * * * 4752 * 543 3739 * * * * * * 3538 * * 3 0 * * * * * * 3350 0 0 H 4 * * * 2684 * * 4600 4327 1417 * * * * 3105 3619 * * * 2463 * 4 0 * * * * * * 3382 0 0 T 5 4126 * * * * * * 4012 * * * * * * * * 183 * * * 5 0 * * * * * * 3387 0 0 V 6 1049 4546 * * * * * * * * * * 4117 * * 3431 2389 2913 * * 6 0 * * * * * * 3478 0 0 G 7 4388 * * * * 2044 * * * * * * 495 * * * * * * * 7 0 * * * * * * 3478 0 0 F 8 3492 * * * 1589 3431 * * * 4256 * * * * 3997 * * 4388 * 1629 8 0 * * * * * * 3478 0 0 D 9 4016 * 232 4718 * * * * * * * 4357 * * * * * * * * 9 0 * * * * * * 4010 0 0 A 10 2293 * 4589 2939 2986 * * * * * * * 1575 * * 3125 * 4991 * 5960 10 0 * * * * * * 4354 0 0 R 11 * * * 4296 * * * * 3370 * * * * * 230 * * * * * 11 0 * * * * * * 4354 0 0 F 12 4781 * * * 490 * * * * * 4974 4219 4908 4925 * 4533 * * * 4140 12 0 * * * * * * 4646 0 0 P 13 * * * * * * * * * 3269 4797 * 259 5344 * * * * * * 13 0 * * * * * * 4964 0 0 Q 14 * * 3791 * * * * * 4592 * * 1436 * 1969 * 3205 3174 5594 * 5539 14 22 6062 * 0 * * * 4984 1000 0 Q 15 4542 5644 * * 3682 * * 5355 2895 * 5358 * 5934 2800 1995 3970 2815 4081 * * 15 0 * * * * * * 4984 0 0 N 16 3224 * * 3464 * 5783 * * 4126 * * 1123 * 4680 5307 2764 4149 * * * 16 0 * * * * * * 4984 0 0 Q 17 5660 * 4874 2530 * * * * 4391 * 5360 3745 * 789 * 6096 5718 6140 * * 17 0 * * * * * * 4982 0 0 T 18 4159 * * * 4895 5360 * 6004 * * 4845 * * 5316 1167 * 1630 * 4570 * 18 0 * * * * * * 4982 0 0 K 19 5012 * * 4970 * * * * 1370 5276 * 3216 4431 4683 1865 5504 5820 5846 * * 19 0 * * * * * * 5014 0 0 H 20 3043 * * 5633 * * 1830 5633 2256 6325 * 3831 * 3144 4472 6263 5182 5979 * 4309 20 0 * * * * * * 5172 0 0 C 21 * 0 * * * * * * * * * * * * * * * * * * 21 0 * * * * * * 5177 0 0 W 22 5153 * * * 2857 * 5532 * * * * * * * 4742 5196 * 4912 843 2674 22 0 * * * * * * 5169 0 0 Q 23 3288 * 3024 2247 * 5418 * * * 3951 * 3327 * 2093 * 6135 3566 6040 * 5153 23 0 * * * * * * 5169 0 0 S 24 1849 * * * * * 4374 * 5996 * * 2478 * * 2308 2257 5532 * * 4437 24 0 * * * * * * 5169 0 0 Y 25 * * * * 3127 * * * * * * * * * 968 * * * * 1418 25 0 * * * * * * 5169 0 0 V 26 3951 6685 968 * * * * 3993 * 4019 5903 4235 * 6254 * * 4417 2644 * * 26 0 * * * * * * 5169 0 0 D 27 2836 * 1802 2072 * 5666 * 5396 4124 3612 5196 5840 * 5138 5026 5277 5428 * * * 27 0 * * * * * * 5169 0 0 Y 28 * * * * 1550 * 5428 * * 5018 * * * * * * * * 5283 789 28 0 * * * * * * 5169 0 0 H 29 4681 3933 * * 1561 * 2106 * * 5283 * * * 4200 * * * 6365 2849 3423 29 0 * * * * * * 5169 0 0 K 30 2985 * 4183 4344 * 5048 * * 1655 5283 * 5692 * 5324 1693 5118 6201 * * * 30 15 6601 * 2585 263 * * 5169 1000 0 C 31 * 0 * * * * * * * * * * * * * * * * * * 31 40 5210 * 1585 585 * * 5169 1102 0 V 32 3720 4389 * * * * * 3078 5637 1051 5210 5804 * 5364 * 5814 4076 3197 * * 32 0 * * * * * * 5169 0 0 N 33 4079 * 1439 2957 * * * * 2684 6645 * 4146 * 6573 3237 * 3482 * * 6040 33 97 3941 * 2700 241 * * 5169 2301 0 M 34 2633 * 4296 2341 * * 5828 5637 1873 3625 6208 5134 * 4289 3944 5428 * 5846 * * 34 145 3656 5918 2611 258 * * 5169 2179 0 K 35 6313 * * 5378 * * 4295 6192 2177 2641 5701 1591 * * 3907 4295 * * * 4365 35 106 3818 * 3091 180 0 * 5162 1915 1000 G 36 4314 * 5192 * * 772 * * 2978 * * 3459 6058 5287 * 4065 5740 * * * 36 204 3540 4437 4102 87 * * 5169 2371 0 E 37 5656 * 3111 1124 * 4447 * 3969 3256 * * * 4276 5034 3979 5496 5409 * * * 37 55 4747 * 2756 231 0 * 5084 1788 1636 D 38 3614 * 1012 2896 * 4407 * 5938 3953 5846 * * * * * 4856 4340 4086 * * 38 0 * * * * * * 5169 0 0 F 39 2555 * 5581 3214 3270 6325 3622 6193 4135 * * 2919 5052 6135 * 4065 3673 4745 * 3620 39 33 5462 * 1280 766 * * 5169 1362 0 A 40 3105 * 4398 3765 * * * 6125 2457 * * 4335 2996 5270 3234 2354 4246 6511 * * 40 44 5072 * 3345 149 * * 5081 1500 0 P 41 2790 * 5033 3590 * 5458 5343 * 3095 4525 * 3876 2195 4326 2852 4974 * 5195 * * 41 44 5068 * 2000 415 * * 5081 1362 0 C 42 5359 36 * * * * * * * * * * * * * * * * * * 42 0 * * * * * * 5186 0 0 K 43 4440 * 5772 2959 * 2990 * 5466 1711 4305 * 3939 4548 4032 3227 6322 * 6156 * * 43 0 * * * * * * 5186 0 0 V 44 3062 * 4979 4380 3416 * * 6055 2652 * * 5073 4451 3468 6613 3965 3747 5724 4531 2680 44 0 * * * * * * 5186 0 0 F 45 5583 * * 2310 1603 * 5871 6193 * 2767 4625 * * 2945 * 6525 5466 * * 3908 45 0 * * * * * * 5186 0 0 W 46 4429 * 5836 3981 3343 5860 * * 3137 5751 5524 4627 * 3460 1822 5550 5703 * 5402 3004 46 0 * * * * * * 5186 0 0 K 47 4311 * 4322 5156 * 6458 4802 * 1624 5514 6322 3238 * 3885 2957 4363 * 5703 * 3391 47 0 * * * * * * 5186 0 0 T 48 2752 5680 5703 3094 4145 4082 * * 5220 4444 * 4155 * 4722 3229 3990 3677 3061 * 4450 48 0 * * * * * * 5186 0 0 Y 49 3177 * * * 1470 * * * * 5635 5837 * * * * 5071 * 5922 * 1170 49 0 * * * * * * 5184 0 0 N 50 5468 * 4966 1249 * * 4795 5894 3312 * 6056 3470 * 2715 3471 * * 5420 * * 50 0 * * * * * * 5184 0 0 A 51 3151 * 4397 4476 * 4722 * 5071 2734 5525 4734 4322 * 4928 4799 1674 4114 5173 * * 51 0 * * * * * * 5184 0 0 L 52 3107 * 3236 * 4901 6159 4649 3945 5716 1595 6390 2660 * * * 3245 * * * * 52 0 * * * * * * 5184 0 0 C 53 * 0 * * * * * * * * * * * * * * * * * * 53 0 * * * * * * 5184 0 0 P 54 2278 * * * * * * 6327 * 5635 * * 682 * 6529 5705 3893 4621 * * 54 0 * * * * * * 5184 0 0 L 55 2392 * 5468 5107 * 3527 5401 3816 3126 6308 6507 4846 6529 3380 5015 2818 3501 4814 * * 55 0 * * * * * * 5184 0 0 D 56 2377 * 4316 2633 5714 * * 5409 * 6115 * * * 2998 * 1389 5749 * * 6205 56 0 * * * * * * 5184 0 0 W 57 * * * * 4752 * * * * * * * * 4123 * * * * 173 5758 57 27 5747 * 2000 415 * * 5067 1000 0 I 58 * * * * 5708 * * 2009 * 3245 * * * 5445 * 5617 4522 889 * * 58 0 * * * * * * 5068 0 0 E 59 5319 * 2892 1357 * 5706 * * 1756 * * * * 4613 * 3991 5014 * * * 59 0 * * * * * * 4996 0 0 K 60 6100 * 4504 5471 * * 2773 4175 2838 5144 * 6025 * * 3159 4161 5721 * * 1528 60 0 * * * * * * 4996 0 0 W 61 4692 * * * 910 * * * * * * * * * * * * * 1221 * 61 0 * * * * * * 4996 0 0 D 62 5488 * 1372 3907 5424 * * 5542 2505 * * 2306 * 4350 * 5833 4837 * * * 62 0 * * * * * * 4996 0 0 D 63 * * 3004 1351 * 6378 * * 2208 * * 5904 * 4118 2573 * 6328 * * * 63 0 * * * * * * 4996 0 0 Q 64 * * * 5320 * * * * 1936 4716 * 5007 * 1490 2665 * * * 3983 3887 64 0 * * * * * * 4960 0 0 R 65 * * * * * * * 4518 5471 4234 5400 * * * 299 * * 4501 * * 65 0 * * * * * * 5000 0 0 E 66 3381 * 2764 1261 4778 * * * 3450 * * * * 3378 * 4453 5083 * * 4636 66 0 * * * * * * 4658 0 0 K 67 3957 * 3282 2789 * * * * 3074 * 5764 1832 * 3701 * 4957 5844 * * 2800 67 0 * * * * * * 4579 0 0 G 68 * * 2375 3757 * 637 * * * 4782 * 4218 * * * * * * * * 68 0 * * * * * * 4579 0 0 I 69 * * * * * * * 3941 4782 2496 * 3564 * 4840 4819 4544 1119 3991 * * 69 0 * * * * * * 4579 0 0 F 70 * 3126 * * 500 * * * * 4696 * * * * * * * * 4245 3526 70 0 * * * * * * 4100 0 0 A 71 2740 * * * * * 4028 * 2632 * * * 869 * * 4297 5089 * * * 71 0 * * * * * * 4028 0 0 G 72 1921 * 4221 * 4028 1364 * * 4833 * 4183 * * * * 4679 5803 4448 * 4660 72 0 * * * * * * 4028 0 0 D 73 * * 2438 * * * 3966 * 1236 * * 3629 3366 * 3232 4557 * * * * 73 0 * * * * * * 3930 0 0 I 74 * * * * 2855 * * 1175 * 1543 * * * * * 3725 * * * * 74 0 * * * * * * 3776 0 0 N 75 * * 1193 2075 * * * * * * * 1620 * * * * * * * * 75 0 * * * * * * 3070 0 0 S 76 * * * * * * * * * * * 1077 * * * 1806 2059 * * * 76 0 * * * * * * 2296 0 0 D 77 * * 1806 1103 * * * * * * * 2008 * * * * * * * * 77 0 * * 0 * * * 2296 0 0 //