HHsearch 1.5 NAME c6hma1_ FAM FILE c6hma1_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6hma1_.a3m DATE Sat Nov 17 08:24:51 2018 LENG 47 match states, 47 columns in multiple alignment FILT 39 out of 43 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.3 EVD 0.4755 1.7326 SEQ >ss_dssp CEEEEEEESSSSSCCCEEEECTTTCCSCCEEEEEETTTTEEEEEEEC >sa_dssp EDEBCACCEDBEEEECECEBCEEEDEDECDDEDDBEEDEEECDBDCE >ss_pred CEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEC >ss_conf 90899994455852147612899982179995108556825332109 >Consensus RxxvxLxCtecgxrnYxtxKNkrnxpxrlelkKyCpxcxkhTlHkET >c6hma1_ RVNVTLACTECGDRNYITTKNKRNNPERIEMKKYCPRLNKYTLHRET >UniRef50_A5IJX0(2-47:49) 50S ribosomal protein L33 n=62 Tax=Bacteria RepID=RL33_THEP1 E=3e-06 s/c=1.15 id=49% cov=100% RVKVALKCSQCGNKNYYTTRNK-DKRAKLELRKYCPKCNAHTIHTET >UniRef50_C5CGE6(9-54:55) 50S ribosomal protein L33 n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGE6_KOSOT E=4e-05 s/c=1.06 id=49% cov=100% KILVTLKCTECGTRNYYRFKDRRKK-YKLDSRKYCPRCRKHTLHKES >UniRef50_P56796(8-63:66) 50S ribosomal protein L33, chloroplastic n=38 Tax=cellular organisms RepID=RK33_ARATH E=5e-07 s/c=0.99 id=49% cov=100% RVTIILECTSCvrndikkeaaGISRYITQKNRHNTPSRLELRKFCPYCYKHTIHGE- >UniRef50_C4XFP9(5-50:52) 50S ribosomal protein L33 n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XFP9_MYCFE E=2e-05 s/c=1.09 id=45% cov=100% RDGFTLVCESCKMENYISKKNKKNTPEKVELSKYCSKCRKHQNHKE- >UniRef50_B2GAB9(4-47:48) 50S ribosomal protein L33 1 n=7 Tax=Bacilli RepID=RL331_LACF3 E=2e-05 s/c=1.13 id=49% cov=96% --KVALECSECGRRNYSV-PARPNHEERLELKKFCKHCGKVTVHRET >UniRef50_B3E147(3-53:55) 50S ribosomal protein L33 n=3 Tax=Verrucomicrobia RepID=RL33_METI4 E=7e-05 s/c=0.95 id=45% cov=100% REQIILECTEAKalgkpASRYYGTKNKKQQQGKIELRKYNPFLRRHTLHRE- >UniRef50_Q04F34(7-52:54) 50S ribosomal protein L33 n=105 Tax=Bacilli RepID=RL33_OENOB E=7e-07 s/c=1.20 id=43% cov=100% RDHVILGNDQTGERIYLTSKNRRNTPDRLVLKKYSPKLHKVVEFKE- >UniRef50_A9G209(2-47:53) 50S ribosomal protein L33 2 n=25 Tax=Bacteria RepID=RL332_SORC5 E=4e-06 s/c=1.14 id=45% cov=100% RDIIKLTCGNCGRANYHTTKNKRTMTDKFVIKKFCPTERKHTEHKE- >UniRef50_P51415(8-52:53) 50S ribosomal protein L33 2 n=69 Tax=Bacteria RepID=RL332_MYCCT E=0.0002 s/c=1.04 id=43% cov=98% --KATLVCVECLSRNYSVNKSGLTQKQRLEIKKFCTTCNAHTLHKET # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * * * * * * 4229 * * * * * 79 * * * * * 1 0 * * * * * * 3086 0 0 V 2 * * 2926 3210 * * * 1584 * 4196 * 3906 * * * * * 1711 * * 2 0 * * * * * * 3086 0 0 N 3 4756 * * * * 4002 3752 3137 1882 4152 * 3822 * 2917 5025 * 4560 3200 * * 3 0 * * * * * * 3315 0 0 V 4 3476 * * * 3581 * * 1363 * * * * * * * * * 1192 * * 4 0 * * * * * * 3320 0 0 T 5 2965 * * * * 5333 4351 2035 4926 * * 4775 * * 5253 2925 1748 5101 * * 5 0 * * * * * * 3369 0 0 L 6 * * * * * * * 5122 * 97 4775 * * * * * * * * * 6 0 * * * * * * 3369 0 0 A 7 2048 * * 1267 * 4377 * 5916 3555 * * * * 4439 5176 * 4926 3536 * * 7 0 * * * * * * 3369 0 0 C 8 * 71 * * * * * * * * * 4377 * * * * * * * * 8 0 * * * * * * 3369 0 0 T 9 5367 * 4377 4453 * 4926 * * 5439 * * 4511 * 5333 4041 3154 1036 3369 * * 9 0 * * * * * * 3369 0 0 E 10 * * 3962 822 * * 5102 * * * * 4926 * 3285 * 3214 * 3355 * * 10 72 4368 * 2585 263 * * 3369 1386 0 C 11 3976 447 * * * * * * * * * * * * * 3649 3022 * * * 11 248 2664 * 3235 162 * * 3369 1742 0 G 12 * * * * * 575 5434 * 2038 4838 * * * * * 5207 * * * * 12 40 5204 * 2322 322 * * 3369 1000 0 D 13 5204 * 3880 2671 * * 5626 3935 * 4995 3668 5188 * 4238 3297 2138 3676 3952 * * 13 0 * * * * * * 3369 0 0 R 14 4926 * * 4286 * * * 4293 2974 * * 5784 * 5066 994 2415 * * * * 14 40 5176 * 2585 263 * * 3369 1000 0 N 15 * * 4327 * * * 4995 3733 * * * 648 * * 2282 * * * * * 15 0 * * * * * * 3369 0 0 Y 16 * * * * * * * * * * * * * * * * * * * 0 16 0 * * * * * * 3369 0 0 I 17 * * * * 5066 * 4234 2194 4892 3317 5664 * * * * 2820 2066 3704 * 3516 17 0 * * * * * * 3369 0 0 T 18 * * * * * 5204 * 3611 * * * * * * 4927 3607 591 3157 * * 18 38 * 5269 * * * * 3369 0 0 T 19 4398 * * 3250 4917 4817 * * 4067 * 5754 4772 4950 3830 * 2954 1296 * 5311 * 19 0 * * * * 0 * 3364 0 1000 K 20 3856 * * 5066 * * * * 338 * * * 5269 * 4334 * * 4872 * * 20 0 * * * * * * 3369 0 0 N 21 4068 * 4927 * * * * * * * * 339 * * * 3097 * * * * 21 0 * * * * * * 3369 0 0 K 22 5253 * * * * 4078 * * 1163 * * * 3188 * 1625 4872 * * * * 22 128 * 3563 * * * * 3369 0 0 R 23 * * * * * * 4201 * 2032 4614 * * 4952 4391 1117 * 3068 * * * 23 0 * * * * 553 1652 3301 0 1763 N 24 * * 5125 * * * * * 3700 5020 * 882 4843 5173 4213 5071 2518 * * * 24 0 * * * * * 0 3330 0 1000 N 25 * * 4755 * * * 2551 * 2848 * 4129 3046 * 3973 5366 * 1447 5613 * * 25 132 * 3518 * * 0 * 3330 0 1000 P 26 * * 4700 4996 * * * * 4709 * * * 935 3319 4980 4270 2433 * * * 26 0 * * * * 0 * 3305 0 1716 E 27 4456 * 2325 1324 * 3901 * * * * * * * 3160 4775 4357 4872 5367 * 4927 27 0 * * * * * * 3369 0 0 R 28 * * * * * * * * 1667 * * * * 5101 684 * * 4892 * * 28 0 * * * * * * 3369 0 0 I 29 * * * * 3629 * * 3208 * 573 * * * * * * * 2849 * * 29 0 * * * * * * 3369 0 0 E 30 * * 4927 645 * * * * 3608 * * * * 5626 5207 4061 5066 3202 * * 30 0 * * * * * * 3369 0 0 M 31 * * * * 4527 * * 3009 * 744 4416 * * * * 4927 * 2682 * * 31 0 * * * * * * 3369 0 0 K 32 * * * * * * * * 933 * 3548 3613 5102 * 2440 3389 * * * * 32 0 * * * * * * 3369 0 0 K 33 * * * * * * * * 0 * * * * * * * * * * * 33 0 * * * * * * 3369 0 0 Y 34 * * * * 1400 * * * * * * * * * * * * * * 687 34 0 * * * * * * 3369 0 0 C 35 * 360 * * * * * * * * * 3016 * * * 3361 * * * * 35 0 * * * * * * 3369 0 0 P 36 5439 * * * * * * * 2391 * * * 785 * 3943 3512 4235 * * * 36 0 * * * * * * 3369 0 0 R 37 * * * * 3769 * 2425 5122 2099 * * 4383 * 4413 2504 * 3881 4380 * 3456 37 0 * * * * * * 3369 0 0 L 38 * 728 4540 4011 * * * * * 1781 * * * * * * * * * * 38 0 * * * * * * 3369 0 0 N 39 * * * * 5101 3657 4377 * 2607 * * 2032 * 5207 1481 5066 * * * 5669 39 0 * * * * * * 3369 0 0 K 40 4002 * * 4775 * * * 5176 601 * * * * * 2673 5432 4872 * * * 40 0 * * * * * * 3369 0 0 Y 41 4762 * * * * * 745 * 5107 * 4215 * * 5396 * 5808 * 2384 * 4308 41 0 * * * * * * 3359 0 0 T 42 * * * * * * * * 4051 * * * * 5085 * 3991 333 4219 * * 42 0 * * * * * * 3359 0 0 L 43 * * * 3179 * * * 2650 * 1133 * 5085 5982 * * * 3843 2650 * * 43 0 * * * * * * 3359 0 0 H 44 * * * * 4219 * 175 * * * * * * 5156 * * * * * 4954 44 0 * * * * * * 3359 0 0 R 45 * * 4830 * * 4324 * * 918 * * * * 5035 2007 5535 5148 4147 * * 45 0 * * * * * * 3359 0 0 E 46 * * * 0 * * * * * * * * * * * * * * * * 46 0 * * * * * * 3359 0 0 T 47 * * * * * * * * * * * * * * * 2925 204 * * * 47 0 * * 0 * * * 2846 0 0 //