HHsearch 1.5 NAME c5wxlD_ FAM FILE c5wxlD_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5wxlD_.a3m DATE Fri Feb 10 03:16:45 2017 LENG 78 match states, 78 columns in multiple alignment FILT 47 out of 51 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.7 EVD 0.4451 0.8846 SEQ >ss_dssp CCCCEEEGGGTEEECCCCCCHHHHSTTCTTHHHHHHHHHHHHHHHHHHHHHTSCEECCCCEECCCCCCSCCCCSSCCC >sa_dssp EDECECABCDECDDDEDEEDEEDCDEEDEECEEDDEDDDEDCDDDBDDDBEECDDDEEEEDDEDDEEEDEEEEEEEEE >ss_pred CCCEEEECHHHEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC >ss_conf 981389710203623570482210245222289998644569999999996298745303786589984688557887 >Consensus xxxxxxDLGnLlaxDxxpxdxxxxxsxxxxxexxLxxxardnxQxLinxlxxLPxxxxgxxvxLPxPttxLPReKplP >c5wxlD_ GPEAVYDLGNLAAFDSNVLDKNDLDSSNARREEKIKSLTRDNVQLLINQLLSLPMKTTMTLLQLPDPTTDLPREKPLP >UniRef50_Q9XVT0(15-82:333) Ribosome biogenesis regulatory protein homolog n=2 Tax=Caenorhabditis RepID=RRS1_CAEEL E=3e-10 s/c=0.97 id=37% cov=86% ----IIDLGNLLFIDREPI--------QGDASEGLEERARKNTQLLFNNIWQLEQKRVeeAIIVTLPPATYRLPREKRLP >UniRef50_C4QD40(8-83:268) Ribosome biogenesis regulatory protein, putative n=2 Tax=Schistosoma mansoni RepID=C4QD40_SCHMA E=1e-05 s/c=0.67 id=28% cov=92% ------DLGNLLIEDKCPLNQFN-EAVSSLDDDHYRTISLDCTYHFFKLFFELPTElnDSVSVSILPKPTFRLPREKKIP >UniRef50_UPI0000DA3CC1(7-82:93) PREDICTED: similar to RRS1 ribosome biogenesis regulator homolog n=1 Tax=Rattus norvegicus RepID=UPI0000DA3CC1 E=5e-16 s/c=1.13 id=39% cov=96% --ELEFHLGNLLASDSNP--SMVLCQARALLEAQVCAPEWENPEHLNNQLWKLLTKgmEEAVVVCLQEPVTGLPRRKPLP >UniRef50_Q7XPU3(17-91:330) Os04g0685100 protein n=2 Tax=Oryza sativa RepID=Q7XPU3_ORYSJ E=7e-17 s/c=1.18 id=38% cov=92% ------DLGNLMAYDPSHHLPAASSSREELREECLRKGT-ELAQAVADALFALPATedRDGPMVRLPPPTTRFPREKHLP >UniRef50_Q4UIE0(15-86:239) Ribosome biogenesis regulatory protein, putative n=1 Tax=Theileria annulata RepID=Q4UIE0_THEAN E=3e-10 s/c=0.92 id=32% cov=87% -----YCLKNLIAIDATP------TSTDLLYDENLLKLSCENAQLLVNKIFGLErtITSDGVFADLPSnDEIVMPRVFPLP >UniRef50_C1EES6(22-101:353) Predicted protein n=2 Tax=Micromonas RepID=C1EES6_9CHLO E=2e-14 s/c=1.00 id=36% cov=94% ------DLGNLAASDPAPVDPDVFgRAPSDSATAAAISRGRDVLQRLVADLFTLPSEADvnGRYVELPAGATQFPRTKPLP >UniRef50_C4M883(11-87:258) Ribosome biogenesis regulatory protein, putative n=2 Tax=Entamoeba RepID=C4M883_ENTHI E=3e-13 s/c=0.99 id=27% cov=90% ------DVGNLLVTDRSDVDIEKFKSDSW---KYIGEIAKEASKTLIDNIYAredvsdHSDPSLGKVVILDEPEMKFPREKPLP >UniRef50_A8BZ40(4-76:176) Putative uncharacterized protein n=2 Tax=Giardia intestinalis RepID=A8BZ40_GIALA E=4e-12 s/c=0.99 id=33% cov=92% -----YDLHYLMATNLEPLPEEATLSTPN--EHVLMQLAVKTLASLCKEFVMLPSTSgpMGPVATLPEPRTLLPREKPLP >UniRef50_A2E515(4-70:233) Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2E515_TRIVA E=5e-11 s/c=1.03 id=29% cov=85% -----FDLYHLSAF-------TTGATKEEINPDYLKQSATDAFISFFKALKECDHESDTK-VKLPKPTVSIPREKPLP # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 P 2 * * * * * * * * * * * * 0 * * * * * * * 2 0 * * * * * * 1000 0 0 E 3 * * 2138 372 * * * * * * * * * * * * * * * * 3 0 * * * * * * 2480 0 0 A 4 2934 2939 * * * * * * * 694 * * * * * * * 3052 * * 4 0 * * * * * * 2480 0 0 V 5 3863 * * 1715 * * * 3458 * 3215 * * * 3884 3397 * 3506 2496 * * 5 0 * * * * * * 2818 0 0 Y 6 * * * * 1229 * * 3630 * 4463 * 4856 * * * * * * * 1276 6 0 * * * * * * 3929 0 0 D 7 * 3685 227 * * * 4458 * * * * 5492 * * * * * * * * 7 0 * * * * * * 4780 0 0 L 8 3832 * * * * * * 4666 * 488 * * * * * * 5362 2707 * * 8 0 * * * * * * 4780 0 0 G 9 * 5492 * * * 274 4851 * 5107 * * * * * 5419 5302 * * * 4706 9 0 * * * * * * 4780 0 0 N 10 * * 5492 * * * 3322 * * 3446 * 729 * * * 5776 3172 * * 4221 10 0 * * * * * * 4780 0 0 L 11 * * * * * * * * * 86 4114 * * * * * * * * * 11 0 * * * * * * 4800 0 0 A 12 2244 * * * * * * 4313 * 1070 3154 * * 5797 5535 4760 4357 5346 * * 12 0 * * * * * * 4800 0 0 A 13 837 4012 * * 5665 3749 * 3793 * 5095 * * * * * 4623 * 2815 * * 13 0 * * * * * * 4800 0 0 F 14 * 4802 * 4800 1882 * * 2331 * 4316 * 4719 * * * 3527 2358 4479 * 4528 14 54 * 4760 * * * * 4800 0 0 D 15 * * 155 5702 * * * * * * * 3601 * * * * * * * * 15 0 * * * * * 0 4694 0 1000 S 16 3099 * * 5642 5689 * 5562 3739 4150 4236 * 5726 1956 * 3285 3262 5659 3250 * 5052 16 0 * * * * * 0 4699 0 1000 N 17 4326 4707 4511 3697 4910 * 4610 * * * * 1258 * 5080 4996 2422 4293 * * * 17 0 * * * * * 0 4699 0 1000 V 18 5715 * 3685 3417 * * 3156 * * * * * 830 * 5818 3852 5112 5718 * * 18 185 * 3057 * * * 0 4695 0 1000 L 19 * * * * 3541 * 5042 2630 * 1465 5264 * * * 4884 * * 1737 * * 19 297 * 2425 * * 2214 350 4504 0 2699 D 20 5402 * 996 3768 4691 * 4489 5143 5428 4866 * 3056 3154 * * * * * * * 20 0 * * * * 2437 295 4637 0 3490 K 21 3349 * 4443 3307 4645 * * 3003 4236 3281 * 5311 2497 4468 * 3970 3752 5267 * 5460 21 0 * * * * 2838 217 4720 0 3298 N 22 4039 * 3481 2864 4585 4674 * * 3897 * 4409 5301 3451 4003 3778 3894 2337 * * * 22 31 * 5578 * * 2015 410 4848 0 3140 D 23 2050 * 3994 3588 * 3796 * * 2267 * * 3974 * 3929 * 4039 3937 3689 * * 23 249 * 2658 * * * 0 4858 0 2886 L 24 5121 4675 4174 * 3161 4325 * 4010 * 1317 * * 4674 * * 4839 4265 * * 2995 24 205 4692 3418 0 * 2379 308 4406 1000 3658 D 25 4379 4263 3470 4401 * * * * 2409 3305 4721 * 4478 3420 2468 3723 4635 * * * 25 35 * 5382 * * 2582 264 4536 0 3777 S 26 2888 5709 5484 * * 4404 * * 4075 * * * * 4306 * 824 3303 * * * 26 85 * 4125 * * 2629 254 4634 0 3499 S 27 3193 * 2545 5778 * 3953 * 5586 3998 4212 * 4336 4754 5751 3786 2887 3112 4452 * 5322 27 167 * 3190 * * 1464 650 4602 0 3635 N 28 * * 4488 2711 * 3547 * * 5587 * * 2970 3345 4057 2968 2117 4268 * * * 28 343 * 2242 * * 3316 153 4876 0 3267 A 29 2376 * 4524 2557 * 4917 * * 4440 4301 4491 3682 5404 5075 * 2289 * 5004 4249 * 29 207 * 2905 * * 2978 196 4695 0 3642 R 30 * 5019 3644 3425 * * * 4129 4352 1642 * 2881 4999 4975 3434 4250 5280 * * * 30 0 * * * * 1440 663 4743 0 3822 R 31 3849 * 3413 * * * 5218 4029 2696 2834 * 4420 3857 * 2194 4419 * 4754 * 4796 31 0 * * * * 687 1401 4727 0 3402 E 32 5818 * 3213 749 * 5632 * * 4967 * * 5469 4604 5495 4927 5431 4249 4939 * * 32 0 * * * * 0 * 4876 0 2297 E 33 2405 * 2069 1644 * * 5058 5071 3693 * * 4924 * 6397 5307 5234 5707 * * * 33 0 * * * * * * 5011 0 0 K 34 4117 5262 3693 3049 3656 5670 3110 5121 5729 5618 * 5354 * 4051 * 3581 * 4441 * 2178 34 0 * * * * * * 5011 0 0 I 35 4376 4382 * * * * * 3121 * 493 * * * * * * * 4584 * 4768 35 0 * * * * * * 5011 0 0 K 36 4247 4584 5556 4326 5234 4784 5707 4689 2662 3327 4115 5596 * 3635 3125 4162 2980 * * * 36 0 * * * * * * 5011 0 0 S 37 2803 * 4793 2643 * * * * 3813 5660 * 3474 * 3066 5556 1999 3890 * * 5556 37 0 * * * * * * 5011 0 0 L 38 * * * 5556 * 4190 5660 2808 * 1373 * 4998 4584 * 2835 3630 4303 * * 5024 38 0 * * * * * * 5011 0 0 T 39 1249 5173 * 4584 * 3739 * * * * * * * * * 2749 1897 5825 * * 39 38 * 5262 * * * * 5011 0 0 R 40 * 5324 * * * * * * 3823 3971 * * * * 621 * 3383 4251 4578 * 40 49 * 4902 * * 0 * 4989 0 1000 D 41 * * 856 2025 * 6349 * * 4273 * * 3442 * 5636 * * 5286 * * * 41 0 * * * * 0 * 4976 0 1000 N 42 3246 4768 * * * 3336 * * * 3282 * 987 * * * 3769 5058 4376 * * 42 0 * * * * * * 5011 0 0 V 43 2920 * * * 4860 * * * * 3014 * * 4584 * * 4784 1724 1604 * * 43 0 * * * * * * 5011 0 0 Q 44 5058 * * 4584 * * 5307 4860 3965 * * * * 381 * * * * * 4768 44 0 * * * * * * 5011 0 0 L 45 2984 * * 5121 5825 * 3340 5135 * 1416 * * * 5234 4376 3099 4784 3883 5071 * 45 0 * * * * * * 5011 0 0 L 46 * * * * 3814 * * 3709 * 310 5671 * * * * * * 5262 * * 46 0 * * * * * * 5011 0 0 I 47 4190 5058 * * 2484 * * 1786 * 3129 * 4584 * * * * * 1784 * * 47 0 * * * * * * 5011 0 0 N 48 3426 * 3661 * * 5173 * * 3306 * * 664 * * * 4266 5950 * * * 48 0 * * * * * * 5011 0 0 Q 49 3314 * 5216 2600 * 4998 5660 * 2361 4768 * 4160 * 2261 3796 4265 4774 * * * 49 0 * * * * * * 5011 0 0 L 50 * * * * 3405 * * 1390 * 1101 5234 * * * * * * 4998 * * 50 25 5844 * 1585 585 * * 5011 1000 0 L 51 * 4755 * * 1268 * * 5234 4860 4262 4406 * * * * * * 4115 1770 4784 51 74 4330 * 761 1286 * * 5011 1537 0 S 52 2631 * 4600 2174 * 4562 * * 2630 * 5058 3428 * 2834 * 3952 4502 * * * 52 86 4119 * 1905 448 * * 5011 1517 0 L 53 * 3876 * * 5121 * 4296 3769 * 392 5905 * * * * * * * * * 53 28 5706 * 1000 1000 * * 5011 1000 0 P 54 * * 4860 3114 * * * * 4902 4584 * * 502 * 6209 4784 5706 * * * 54 128 3555 * 1000 1000 * * 5011 1992 0 M 55 5262 * 4784 * * * 4860 2627 5234 5905 3623 5745 * 5670 5825 2697 1484 4341 * * 55 255 2624 * 1592 582 * * 5011 3045 0 K 56 * * 4998 1377 * * 4727 * 2881 * * * 4784 5071 * 3849 1863 * * * 56 322 2321 * 999 1001 * * 5011 3101 0 T 57 4074 * 3102 2647 * * * 4998 5905 * * 5556 5950 5071 1822 2144 4639 * * * 57 178 3104 * 1116 892 * * 5011 2436 0 T 58 3911 * 1485 3107 * 5074 * 3929 * 4784 3652 * * * * 4768 3191 3598 * 5618 58 485 1810 * 1048 953 * * 5011 3187 0 M 59 2643 * * * * 769 * 6355 * * 4402 * * * * 5978 4852 3038 * 5546 59 0 * * * * * * 4987 0 0 T 60 * * * * * * * 2429 3809 3454 5546 * 2199 * 3930 4098 3906 2173 * * 60 71 6198 4852 2322 322 * * 4987 1000 0 L 61 * * * * 3126 * 5894 3899 * 1498 3843 * * * * * 5675 1791 * 3852 61 0 * * * * 0 * 4886 0 1000 L 62 1455 * * * * * * * * 3128 * * * * * 4744 5301 1126 * * 62 0 * * * * * * 4987 0 0 Q 63 4460 4563 4431 4438 * * * 3378 2305 5567 * 4824 * 2317 4604 4160 2729 5943 * * 63 0 * * * * * * 4987 0 0 L 64 * * * * 5301 * * * * 109 5014 * * * * * * 5951 * * 64 0 * * * * * * 4987 0 0 P 65 * * 4767 * * * * * * * * * 119 4563 * * * * * * 65 32 5495 * 0 * * * 4987 1000 0 D 66 3021 * 4316 1645 * * * * 2481 * * * 2426 5149 4264 4602 * 5632 * * 66 36 5326 * 0 * * * 4987 1000 0 P 67 4892 5567 5326 5673 4723 4668 * * * * * * 462 4287 * 5687 5214 * * * 67 29 5638 * 2000 415 * * 4987 1000 0 T 68 4104 * * 3311 * * * 4692 5687 * * 4187 * * 4269 3982 1015 3083 * * 68 49 4912 * 2435 295 * * 4987 1370 0 T 69 * * * * 3247 * * 3293 * 5880 3946 * * * * 4373 897 4374 * 3692 69 0 * * * * * * 4987 0 0 D 70 * * 5708 * * 4563 4824 4082 2890 3515 * 5546 3625 2925 2379 4341 5543 3003 * * 70 0 * * * * * * 4987 0 0 L 71 * * * * 2899 * * 2735 * 641 4489 * * * * * * 5058 * * 71 0 * * * * * * 4987 0 0 P 72 5099 * * * * * * * * * * * 43 * * * * * * * 72 0 * * * * * * 4787 0 0 R 73 * * * * * * * * * * * * * * 0 * * * * * 73 0 * * * * * * 4787 0 0 E 74 5223 * * 611 * 5585 4810 * * 4589 4477 * * * 4591 4184 5182 4278 * * 74 0 * * * * * * 4787 0 0 K 75 * * * * 5150 * 5293 * 417 4505 * * * * 3246 * * * * 4378 75 0 * * * * * * 4727 0 0 P 76 3617 * * * * * 4013 * 4059 * * * 579 4804 4489 4410 * * * * 76 0 * * * * * * 4727 0 0 L 77 5293 5448 * * * * * 2506 * 709 5546 * 4283 * * * * 3455 * * 77 0 * * * * * * 4727 0 0 P 78 * * * * * * * * * * * * 0 * * * * * * * 78 0 * * 0 * * * 4739 0 0 //