HHsearch 1.5
NAME  c5nqgB_
FAM   
FILE  c5nqgB_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c5nqgB_.a3m 
DATE  Sat Sep  9 08:09:43 2017
LENG  33 match states, 33 columns in multiple alignment
FILT  2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.2 
EVD   0.5601  5.4494 
SEQ
>ss_dssp
CHHHHHHTCCCCCCEEECCSSSCCEEECSSCCC
>sa_dssp
EEECEEEEEEEEDDDDEDEEEEECEEDDEEEEE
>ss_pred
CCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHCC
>ss_conf
963101365763101210389725668886309
>Consensus
xqhatdigmgpxtscytsxxpppkxiciqqxvk
>c5nqgB_
SQHATDIGMGPATSCYTSTIPPPKQVCIQQAVK
>UniRef50_Q7R9P8(2066-2098:2232) Putative uncharacterized protein PY06813 n=6 Tax=Plasmodium (Vinckeia) RepID=Q7R9P8_PLAYO  E=6e-14 s/c=2.37 id=76% cov=103%
TQHATDIGMGPSTSCYTSLLPPPKSICIQQTVK
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
S 1    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1000	1000	*	*	*	1
       0	*	*	*	*	*	*	1158	0	0	

Q 2    *	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	2
       0	*	*	*	*	*	*	1158	0	0	

H 3    *	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	3
       0	*	*	*	*	*	*	1158	0	0	

A 4    0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	4
       0	*	*	*	*	*	*	1158	0	0	

T 5    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	5
       0	*	*	*	*	*	*	1158	0	0	

D 6    *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	6
       0	*	*	*	*	*	*	1158	0	0	

I 7    *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	7
       0	*	*	*	*	*	*	1158	0	0	

G 8    *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	8
       0	*	*	*	*	*	*	1158	0	0	

M 9    *	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	9
       0	*	*	*	*	*	*	1158	0	0	

G 10   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	10
       0	*	*	*	*	*	*	1158	0	0	

P 11   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	11
       0	*	*	*	*	*	*	1158	0	0	

A 12   1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1000	*	*	*	*	12
       0	*	*	*	*	*	*	1158	0	0	

T 13   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	13
       0	*	*	*	*	*	*	1158	0	0	

S 14   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	14
       0	*	*	*	*	*	*	1158	0	0	

C 15   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	15
       0	*	*	*	*	*	*	1158	0	0	

Y 16   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	16
       0	*	*	*	*	*	*	1158	0	0	

T 17   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	17
       0	*	*	*	*	*	*	1158	0	0	

S 18   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	18
       0	*	*	*	*	*	*	1158	0	0	

T 19   *	*	*	*	*	*	*	*	*	1000	*	*	*	*	*	*	1000	*	*	*	19
       0	*	*	*	*	*	*	1158	0	0	

I 20   *	*	*	*	*	*	*	1000	*	1000	*	*	*	*	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	1158	0	0	

P 21   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1158	0	0	

P 22   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	22
       0	*	*	*	*	*	*	1158	0	0	

P 23   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	23
       0	*	*	*	*	*	*	1158	0	0	

K 24   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1158	0	0	

Q 25   *	*	*	*	*	*	*	*	*	*	*	*	*	1000	*	1000	*	*	*	*	25
       0	*	*	*	*	*	*	1158	0	0	

V 26   *	*	*	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	1000	*	*	26
       0	*	*	*	*	*	*	1158	0	0	

C 27   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	27
       0	*	*	*	*	*	*	1158	0	0	

I 28   *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	28
       0	*	*	*	*	*	*	1158	0	0	

Q 29   *	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	29
       0	*	*	*	*	*	*	1158	0	0	

Q 30   *	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	30
       0	*	*	*	*	*	*	1158	0	0	

A 31   1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1000	*	*	*	31
       0	*	*	*	*	*	*	1158	0	0	

V 32   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	32
       0	*	*	*	*	*	*	1158	0	0	

K 33   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	33
       0	*	*	0	*	*	*	1158	0	0	

//