HHsearch 1.5 NAME c5my7A_ FAM FILE c5my7A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5my7A_.a3m DATE Sat Jun 24 08:25:41 2017 LENG 93 match states, 93 columns in multiple alignment FILT 13 out of 17 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.4 EVD 0.4083 -0.6915 SEQ >ss_dssp CEEEEEEECGGGCEEEEEEEECTTSCEEEEEEEETTEEEEEEBCTTTCCSSCEEECCTTSCEEEESCCCCCGGGCCEEEECTTSCEEEEEEBC >sa_dssp EEDDAEBDBDEDDEBDABABCDEEDEBDCABACBEEEDCEBDCCEEECDEEDBCABEEECCCABBBDBDECBDECEBDACBDEEEDCBDEADE >ss_pred CCCEEEEEECCCEEEEEEEEECCCCCCEEEEEEECCEEEEEEECCCCCCCCCEEEECCCCEEEECCCCCCCCCEEEEEEECCCCCEEECCCCC >ss_conf 974588995598089999701688885799999789078876314444673417803555473134225641000577885899898615789 >Consensus xxxtVsYxCQxgkklxVxYxFNxxgxPtxAxaxxnGkkrxlpxdlxxSdxxxTxFxxxxgyxxxxxxxxxnxrxxxixixaPnxeiLyKxCxP >c5my7A_ AKKTVSYVCQQGKKVKVTYGFNKQGLTTYASAVINGKRVQMPVNLDKSDNVETFYGKEGGYVLGTGVMDGSYRKQPIMITAPDNQIVFKDCSP >UniRef50_P94741(135-224:226) Component protein of adhesin complex n=2 Tax=Eikenella corrodens RepID=P94741_EIKCO E=4e-18 s/c=1.03 id=46% cov=97% ---SVAYVCQQGRRLNVNYRFNSAGVPTSAELRVNNRNLRLPYNLSASDNVDTVFSAN-GYRLTTNAMDSAnYRSQDIIVSAPNGQMLYKDCSP >UniRef50_C8N9C4(162-252:254) Adhesin component n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9C4_9GAMM E=1e-20 s/c=1.10 id=32% cov=98% ---SVSYMCLNERRLKVNYAFNGAGVPVKAEAILNGSKRTLQYDLNRSGDQDVYFQDRAGYNLSTSYMDaNNFRQNTVMVMNPNSEFLYKDCAP >UniRef50_C8N7H3(304-393:393) Putative uncharacterized protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N7H3_9GAMM E=0.0003 s/c=0.51 id=24% cov=98% --KTRNYQCQNGKKLRVEYLDIDTPSPT-AVVRQGKKSVRMPLDEGASEGKNMIFSSDAGMLHLVKTDGNNLAKAEVLSFDHNGKPVAFACKP >UniRef50_P94741(23-117:226) Component protein of adhesin complex n=2 Tax=Eikenella corrodens RepID=P94741_EIKCO E=2e-25 s/c=1.23 id=39% cov=101% AGGTVSYVCQQGKQVDVSYQFNSRGKPVSARARLNGSNRNMAFDARRSDSTGTAFKDRAGYNLTGPvLTASNYRSEEgISILSPRSEFLYKDCNP >UniRef50_C4GH70(34-126:127) Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GH70_9NEIS E=1e-24 s/c=1.23 id=42% cov=100% STQTVNYTCQQGR-VAVKYNFNGAGIPVTAAAKLNGATRVMQYDLNKSDNVDTIFGGRGYGISMEMLTSKNARKANIAtITSPNDEILFKDCAP >UniRef50_C5TL98(27-117:120) Component protein of adhesin complex n=6 Tax=Neisseriaceae RepID=C5TL98_NEIFL E=1e-21 s/c=1.14 id=30% cov=97% ----VSYRCDGGKSLNVMYGFDRSGRAVTADVNAGGKKASLVVDKKRSDSTGTTFTNRRGYAMSAGFIDKNTHttSEVVGVNAPNGSFLVKNCEP >UniRef50_A5EV15(133-230:230) Potential adhesin complex protein n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EV15_DICNV E=4e-17 s/c=0.77 id=41% cov=101% SVKQANYVCQQGKKMKVEYGFNEVGIPVYALVNFKGTKLKLPYDLDQSSEASTFFTKDGYVFAGDGMTVDTYRNSFMMLTAPSNEILYKMCKA >UniRef50_A7JVR3(5-130:131) Possible adhesin n=2 Tax=Mannheimia haemolytica RepID=A7JVR3_PASHA E=1e-37 s/c=1.01 id=43% cov=101% KTSTVKYSCQNGKKLSVKYGFNKQGIPTYAEAKLSGKKRFMPINLYTTDATGTNFGDENNFSLyGDPMEFTNHRKASVNIQSPASEILYKGCTP >UniRef50_A5EV15(25-114:230) Potential adhesin complex protein n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EV15_DICNV E=3e-26 s/c=1.30 id=39% cov=96% -----SYRCDQDRKIDVVYSFNSAGVPTKAEVMIQGKKRVLNYNMDRSDNVDSFFNDKAGYELSSNiITRDDYHSSSIMIMSPKSEILFKNCSA # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 1250 * * * * * * * 1873 * * * * * * 1706 * * * * 1 0 * * * * * * 2533 0 0 K 2 * * * * * 1811 * * 2884 * * * * * * * 1904 1679 * * 2 0 * * * * * * 2533 0 0 K 3 * * * * * 2260 * * 1008 * * * * 3253 3330 3479 * * * * 3 0 * * * * * * 3059 0 0 T 4 * * * * * * * * * * * * * 2423 * 2518 646 * * * 4 0 * * * * * * 3207 0 0 V 5 3388 * * * * * * * * * * * * * 2951 * * 367 * * 5 0 * * * * * * 3387 0 0 S 6 3798 * * * * * 3619 * 3929 * * 1512 * * * 1216 * * * * 6 0 * * * * * * 3448 0 0 Y 7 * * * * * * * * * * * * * * * * * * * 0 7 0 * * * * * * 3448 0 0 V 8 * * * * * * * * * * 3809 3619 * 2412 2617 2899 3842 1773 * * 8 0 * * * * * * 3448 0 0 C 9 * 0 * * * * * * * * * * * * * * * * * * 9 0 * * * * * * 3448 0 0 Q 10 * * 2617 * * * * * * 3809 * * * 385 * * * * * * 10 0 * * * * * * 3448 0 0 Q 11 * * * * * 2514 * * * * * 1346 * 1212 * * * * * * 11 0 * * * * * * 3448 0 0 G 12 * * 2730 3809 * 626 * * * * * 2941 * * * * * * * * 12 0 * * * * * * 3448 0 0 K 13 3869 * * * * * * * 623 * * * * * 1825 * * * * * 13 104 * 3842 * * * * 3448 0 0 K 14 * * * * * * * * 778 * * * * 3734 2682 3319 3546 * * * 14 0 * * * * 0 * 3390 0 1000 V 15 * * * * * * * 2932 * 971 3534 * * * * * * 1876 * * 15 0 * * * * * * 3448 0 0 K 16 3842 * 2185 * * * * * 2166 * * 2594 * * 2987 2352 * * * * 16 0 * * * * * * 3448 0 0 V 17 * * * * * * * * * * * * * * * * * 0 * * 17 0 * * * * * * 3448 0 0 T 18 * * * 2235 * * * * 2885 * 3416 2286 * * * 3853 2218 3851 * * 18 0 * * * * * * 3448 0 0 Y 19 * * * * * * * * * * * * * * * * * * * 0 19 0 * * * * * * 3448 0 0 G 20 3809 * * * * 1399 * * * 2987 * 3842 * 3853 3798 2730 * 4017 * * 20 0 * * * * * * 3448 0 0 F 21 * * 2987 * 194 * * * * * * * * * * * * * * * 21 0 * * * * * * 3448 0 0 N 22 * * 3416 * * * * 2987 * * * 358 * * * * * * * * 22 0 * * * * * * 3448 0 0 K 23 * * 2987 2755 * 2826 * * 1833 * * * * * 3416 2249 * * * * 23 0 * * * * * * 3448 0 0 Q 24 1825 * * * * * * * * * * * * 1546 3853 3416 2987 3534 * * 24 0 * * * * * * 3448 0 0 G 25 * * * * * 466 * * * * * 2739 2987 * * * * * * * 25 0 * * * * * * 3448 0 0 L 26 * * * * * * * 2173 3853 2218 * * * * 3416 2987 * 1866 * * 26 0 * * * * * * 3448 0 0 T 27 3416 * * * * * * * * * * * 249 * * * 3941 * * * 27 0 * * * * * * 3448 0 0 T 28 * * * * * * * * * * * * * * * * 714 1357 * * 28 194 * 2987 * * * * 3448 0 0 Y 29 * * * * * * * * 2010 * * * * 3806 * 2618 2417 * * 1599 29 0 * * * * 0 * 3130 0 1000 A 30 122 * * * * * * * * * * * * * * * * 3619 * * 30 0 * * * * * * 3448 0 0 S 31 3842 * 3416 1846 * * * * * 3534 * * * * 3853 2905 4017 2269 * * 31 0 * * * * * * 3448 0 0 A 32 856 * * * * * * * * 3798 * * * * * * * 1413 * * 32 0 * * * * * * 3448 0 0 V 33 * * * * * * * 3809 2206 * 3851 2474 * * 1904 * 4017 3941 * 3869 33 0 * * * * * * 3448 0 0 I 34 3416 * * * 3534 * * 2212 * 1300 * * * 2987 * * * 3798 * * 34 0 * * * * * * 3448 0 0 N 35 * * * * * 2186 * * 2755 * * 1008 * 3851 * 3929 * * * * 35 0 * * * * * * 3448 0 0 G 36 * * * * * 318 * * 2987 * * 3798 * * * * * * * * 36 0 * * * * * * 3448 0 0 K 37 3842 * * * * * * * 663 * * * * * 3798 2831 3534 * * * 37 0 * * * * * * 3448 0 0 R 38 * * 3869 * * * * * 1158 * * 2825 * * 2771 2987 3842 * * * 38 0 * * * * * * 3448 0 0 V 39 3416 * * * * * * * * 2660 * * * * 845 * * 2387 * * 39 0 * * * * * * 3448 0 0 Q 40 * * * * 2899 * * * 3534 4017 * 3853 * 3941 2336 3416 2711 2847 * * 40 0 * * * * * * 3448 0 0 M 41 * * * * * * * * * 883 1128 * * * * * * * * * 41 0 * * * * * * 3448 0 0 P 42 3853 * * * * * * * 4017 * * 3851 824 2826 * * * 3416 * * 42 0 * * * * * * 3448 0 0 V 43 * * * * 3853 * * 2214 * 2987 * * * * * * * 2655 * 1216 43 0 * * * * * * 3448 0 0 N 44 * * 790 * * * * * * * * 1245 * * * * * * * * 44 0 * * * * * * 3448 0 0 L 45 3853 * * 2987 * * * * 3416 640 3851 * * * * * * * * * 45 0 * * * * * * 3448 0 0 D 46 2739 * 2179 * * 2987 * * 3416 * * 2302 * * 3853 3798 * * * 3929 46 0 * * * * * * 3448 0 0 K 47 2336 * * * * * 3619 * 2891 * * * * 3534 1205 * 3929 * * * 47 0 * * * * * * 3448 0 0 S 48 * * * * * * * * * * * * * * * 208 2899 * * * 48 0 * * * * * * 3448 0 0 D 49 * * 482 2987 * 3809 * * * * * * * * * 3534 * * * * 49 0 * * * * * * 3448 0 0 N 50 3929 * 3809 3534 * 2987 * 3619 3869 * * 1566 * * * 2618 * * * * 50 0 * * * * * * 3448 0 0 V 51 2576 * * * * * * * 2987 * * * * 3809 * * 2129 1300 * * 51 0 * * * * * * 3448 0 0 E 52 * * 1278 3941 * 1690 * * * * * 2987 * * * 3534 * * * * 52 0 * * * * * * 3448 0 0 T 53 * * * * * * * * * * 2987 * * * * 3851 448 3809 * * 53 0 * * * * * * 3448 0 0 F 54 3853 * * * 2179 * * 2352 3619 * * 3929 * * * * 3416 2833 * 2909 54 0 * * * * * * 3448 0 0 Y 55 * * * * 97 * * * * * * * * * * * * * * 3941 55 0 * * * * * * 3448 0 0 G 56 * * * * * 1513 * * 2933 * * 3851 * 3809 * 2336 2474 * * * 56 0 * * * * * * 3448 0 0 K 57 3798 * 1302 * * 3842 * * 2102 * * 3416 * * * 2987 * * * * 57 0 * * * * * * 3448 0 0 E 58 * * 2235 2328 * * * * 2932 * * 3798 * * 1718 * * 3619 * * 58 108 * 3798 * * * * 3448 0 0 G 59 1449 * 3777 * * 1619 * * * * * 3849 * * 3327 3920 * * * * 59 0 * * * * 0 * 3400 0 1000 G 60 * * * * * 494 * * * * * 2899 * * * * * * * 2680 60 0 * * * * * * 3448 0 0 Y 61 * * * * 2352 3842 * * * * 2987 * * * * * * 3534 * 938 61 0 * * * * * * 3448 0 0 V 62 3416 * * 3851 3534 * * 3842 * 2987 3619 2305 * * 3798 2899 * 3941 * * 62 0 * * * * * * 3448 0 0 L 63 3534 * * * * * 2987 2241 * 1277 3416 * * * * 3842 * * * * 63 98 3929 * 0 * * * 3448 1000 0 G 64 * * 3619 * * 2203 * * * 2987 2856 * * * * 1756 2825 * * * 64 0 * * * * * * 3448 0 0 T 65 3416 * 2718 3842 * 3853 * * * * * * * * * 2860 1508 2987 * * 65 0 * * * * * * 3448 0 0 G 66 3619 * * * * 1673 * * 2987 * 3842 2824 2890 * * 2909 * * * * 66 215 2852 * 0 * * * 3448 1506 0 V 67 2833 * * * 3416 * * 3851 * 2848 2718 4017 * * * * 2987 3941 * 2711 67 0 * * * * * * 3448 0 0 M 68 * * 2987 3929 * * * 3416 * 3869 1888 * * * * * 1763 3619 * * 68 0 * * * * * * 3448 0 0 D 69 3853 * 1167 * 3929 2987 * * * * * * * * 3851 2856 * 3534 * * 69 325 2311 * 0 * * * 3448 1801 0 G 70 * * 2684 * * 3941 * * 2613 * * 1911 * * * 2301 2765 * * * 70 0 * * * * * * 3448 0 0 S 71 3798 * 3851 * * * * * * * * 676 * * * 3941 2576 * * * 71 108 3798 * 0 * * * 3448 1000 0 Y 72 3842 * * * 2909 * 3929 * * 2987 * * * * * * 2514 * * 1217 72 0 * * * * * * 3448 0 0 R 73 2987 * * * * * 2112 * * * * * * * 834 * * * * 3619 73 142 3416 * 1000 1000 * * 3448 1000 0 K 74 * * 3619 4017 * * * * 1340 * * 3534 * 3809 * 1717 * * * * 74 0 * * * * * * 3448 0 0 Q 75 1629 * * 2618 * * * * * * * 3809 * 2195 * 2158 * * * * 75 0 * * * * * * 3448 0 0 P 76 * * 3798 2356 3534 * * * * * * 3842 2978 * * 2298 3809 2514 * * 76 103 3853 * 0 * * * 3448 1000 0 I 77 * * * * * * * 1073 * * 3534 * * * * * 3619 1487 * * 77 0 * * * * * * 3448 0 0 M 78 3842 * * * * 3416 * 2705 * 2987 1499 2899 * * * 3853 * * * * 78 236 2726 * 608 1540 * * 3448 1578 0 I 79 * * * * * * * 1319 * 3534 * * * * * 2987 * 1371 * * 79 0 * * * * * * 3448 0 0 T 80 * * * * 2412 * * * * 3853 2830 3416 * 2899 * 3798 1724 * * * 80 0 * * * * * * 3448 0 0 A 81 1327 * 2362 * * * * * * * * 3809 * * * 1575 * * * * 81 0 * * * * * * 3448 0 0 P 82 3869 * * * * * 2987 * * * * * 312 * * * * * * * 82 0 * * * * * * 3448 0 0 D 83 3929 * 2978 * * * * * 3851 * * 960 * * 3853 2692 * * * * 83 0 * * * * * * 3448 0 0 N 84 * * 3842 * * 1777 * * * * * 2102 * * * 1302 * * * * 84 0 * * * * * * 3448 0 0 Q 85 * * * 1019 * * * * 2362 * * * * 2867 3619 3416 * * * * 85 0 * * * * * * 3448 0 0 I 86 * * * * 2094 * * 817 * * 3798 * 2987 * * * * * * * 86 0 * * * * * * 3448 0 0 V 87 * * * * * * * * * 434 * * * * * * * 1945 * * 87 0 * * * * * * 3448 0 0 F 88 2987 * * * 2292 * * * * * * * * * * * * 3416 * 796 88 0 * * * * * * 3448 0 0 K 89 * * * * 2987 * * * 300 * * 4017 * * * * * * * * 89 0 * * * * * * 3448 0 0 D 90 2987 * 1290 3619 * 2899 * * * * 3534 2617 * * * * * * * * 90 0 * * * * * * 3448 0 0 C 91 * 0 * * * * * * * * * * * * * * * * * * 91 0 * * * * * * 3448 0 0 S 92 2743 * * 3370 * * * * 2155 * * 2846 * * 3498 2176 3636 * * * 92 0 * * * * * * 3412 0 0 P 93 2605 * * * * * * * * * * * 259 * * * * * * * 93 0 * * 0 * * * 3412 0 0 //