HHsearch 1.5 NAME c4z42A_ FAM FILE c4z42A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4z42A_.a3m DATE Sat Apr 16 08:14:07 2016 LENG 99 match states, 99 columns in multiple alignment FILT 29 out of 33 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.1 EVD 0.3652 -2.2880 SEQ >ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTSCCSTTBCTTTTTTCSCBCCEEECSSSEEECCBSCCC >sa_dssp EEDDEEDEECEECCEDAEDAEDDDEEEEEADDDBACABABBCABDBAEEDCDDEDACEDADEDBEEEDADECBBEEBDEBDBDBEBEECDDEADBEDBC >ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHCCHHHHHCCCCEEEECCCCCEEEEECCCC >ss_conf 987789999999999999999999608767617899999999999985699999999999985197751146887750034157648998688723899 >Consensus MxLtPxExekLxixxaxxlAxxRxxrGlkLNxpEAvAlixdxixExaRdGxsvaelmxxgxxlLxxdxVmxGVxxlixxiqVExxfpdGtkLVtVhxPI >c4z42A_ MQLTPREVEKLMIYTLSDVAFKRKARGLKLNYPEAVSIITVTAMEGARDGKSVEDVMKEASKVLTKDDVMDGVADLIPNVQVEAIFTDGSRLVTVHDPI >UniRef50_A4XMB2(1-91:91) Urease subunit gamma n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMB2_CALS8 E=1e-15 s/c=0.93 id=42% cov=93% MYLTNEEKEKLLLWLAGKMAKERKEKGLKLNYPEAIAYICYEVIEAVRAGCSYEEAVKTVETALRKEDVIEGVEDMIEDIQIELTFEDGTK-------- >UniRef50_Q8W3L6(1-100:843) Urease n=3 Tax=Magnoliophyta RepID=Q8W3L6_ORYSI E=3e-36 s/c=1.52 id=46% cov=101% MKLEQREAEKLALHNAGFLAQKRLARGLRLNYTEAVALIAAQILEFVRDGdRTVTDLMDLGKQLLGRRQVLPAVPHLLETVQVEGTFMDGTKLITVHDPI >UniRef50_A1B1C2(1-99:103) Urease subunit gamma n=21 Tax=Bacteria RepID=URE3_PARDP E=1e-35 s/c=1.52 id=52% cov=101% MNLTPREREKLLVSLAAMVARNRLSRGVRLNHPEAIALITDFVVEGARDGRSVADLMQAGAHVITAGQCMSGVPEMIEAVQVEATFPDGTKLVTVHHPI >UniRef50_C9KIW5(1-99:100) Urease subunit gamma n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIW5_9FIRM E=3e-34 s/c=1.47 id=52% cov=101% MRLTPQDMEKLMLHYAGKLAEECRARGLKLNHPEAVAYLSMELMEMARDGHTVTDIMARGREILTREDVMEGVPEMIPSVQIEATFPDGTKLVTVHEPI >UniRef50_D2AWW9(1-98:247) Urease, beta subunit n=8 Tax=Bacteria RepID=D2AWW9_STRRD E=1e-31 s/c=1.40 id=47% cov=100% MRLTPAERDRLLLFTAAGLARARKARGLRLNVPEATALIADTVCEAARDGAWLAEAVEAGRRVLGPDDVLPGVADVVTEVMVEAVFDDGTRLAVVTDP- >UniRef50_A4FFD3(1-75:169) Urease beta/gamma subunit n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FFD3_SACEN E=9e-14 s/c=1.04 id=41% cov=76% ------------------------ARGSRLGSAEAIALVCDEVLEMAWDGVGIDEVVAMAKEVVRPDQVLPGVAASAPRVQVEALFPHGSSLVHVDEP- >UniRef50_B3T9J7(24-119:128) Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_APKG7F11 RepID=B3T9J7_9ARCH E=2e-05 s/c=0.52 id=21% cov=97% ----PHESDEEIFFNSVQLVIARIEKKLKINLNEVLTIFLDFLVREHRKKRDIDEIKENLSKLLTHDQVLIGVPELVKKIEFSGRIDLNPKFtIVLNEPI >UniRef50_D0D875(1-99:131) Urease subunit gamma n=1 Tax=Citreicella sp. SE45 RepID=D0D875_9RHOB E=3e-25 s/c=1.17 id=36% cov=101% MHLPPTELERLTIFTAAGLAPRYLREGVRLSHPEAVAYLADELLLAARKGMDRPAMVSHAATLLTHDQVEPGVPSLLDTFPVEVMMDEGTKLVTVFDPI >UniRef50_D2B6G2(1-98:190) Bifunctional urease subunit gamma/beta n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B6G2_STRRD E=6e-25 s/c=1.16 id=48% cov=100% MHLTPREQERLTIFTVAELARRRRSRGRRLNAPEAIALICDEILEQAWDGASLEEVVSAAQTLLTAGDVMDGVPSLVTHVQVEALFPNGTALVAVDAP- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 2707 0 0 Q 2 * * * 5004 * * 1911 * 3071 4195 * 3210 * 2750 2630 * * * * 3171 2 0 * * * * * * 2707 0 0 L 3 * * * * 4827 * * * * 130 4297 * * * * * * * * * 3 0 * * * * * * 2750 0 0 T 4 * * * 4641 * * * * * * * * 3779 4297 * 4133 532 3516 * * 4 0 * * * * * * 2750 0 0 P 5 3699 * * * * * * * * * * 4300 309 3940 * * * * * * 5 0 * * * * * * 3076 0 0 R 6 4673 * * 4300 * * 2779 * 2917 * * * * 3560 1189 * 3203 * * * 6 0 * * * * * * 3076 0 0 E 7 * * 3781 109 * * * * * * * * * * * * * * * * 7 0 * * * * * * 3076 0 0 V 8 4834 * * * 4618 * * * 2724 1925 4885 * * 2500 3239 3036 * 3816 * * 8 0 * * * * * * 3076 0 0 E 9 * * 1181 964 * * 4429 * * * * * * * * * * * * * 9 0 * * * * * * 3076 0 0 K 10 * * * 3036 * * * * 853 * * * * * 1624 * * * * * 10 0 * * * * * * 3076 0 0 L 11 * * * 3036 * * * 4621 * 256 * * * * * * * * * * 11 0 * * * * * * 3076 0 0 M 12 4834 * * * * * * 3036 * 1906 2350 * * * * * 1725 3690 * * 12 0 * * * * * * 3076 0 0 I 13 * * * * 3036 * * 1302 * 1479 * * * * * * * 3137 * * 13 0 * * * * * * 3076 0 0 Y 14 * * * * 1102 * 2146 * * * * * * * * 2631 * 5055 4300 3921 14 0 * * * * * * 3076 0 0 T 15 * * * * * * * 4685 * 2904 3405 2671 * 3588 * 4621 1584 5055 * 3498 15 0 * * * * * * 3076 0 0 L 16 654 * * * * * * * * 2346 * * * * * 3036 * 4445 * * 16 0 * * * * * * 3076 0 0 S 17 1102 4685 * * * 1735 * * * * * * * * * 3779 * 3036 * * 17 0 * * * * * * 3076 0 0 D 18 * * 3779 2077 3723 3289 * * 3563 3136 4051 * * 2572 * 4429 * 4685 * * 18 0 * * * * * * 3076 0 0 V 19 * * * * * * * * * 631 4300 * * * * * * 1721 * * 19 0 * * * * * * 3076 0 0 A 20 244 * * * * * * * * * * * * * * 4883 * 3036 * * 20 0 * * * * * * 3076 0 0 F 21 * * * 3174 4960 * * 3036 3614 4618 * * 3987 2338 1507 * * * * * 21 0 * * * * * * 3076 0 0 K 22 2634 * * 3563 * * * * 1737 * * 4769 * * 1260 * * * * * 22 0 * * * * * * 3076 0 0 R 23 * 4885 * * * * * * * * * * * * 147 * * * * 3987 23 0 * * * * * * 3076 0 0 K 24 * * * * * * * 3036 1666 1697 * * * 5395 2381 * * * * 4685 24 0 * * * * * * 3076 0 0 A 25 1336 4432 4484 1697 * * * * * * * 4682 * * 4050 3252 * * * * 25 0 * * * * * * 3153 0 0 R 26 * * * 4050 * * * * 1741 * * * * * 747 4484 * * * * 26 0 * * * * * * 3153 0 0 G 27 * * * * * 185 * * 3056 * * * * * * * * * * * 27 58 * 4658 * * * * 3153 0 0 L 28 * * * * * * * 4037 * 783 * * * * 4640 4356 * 1895 * * 28 0 * * * * * 0 3125 0 1000 K 29 * * * * * * * * 749 * * * 5020 * 1461 * 6533 * * * 29 0 * * * * * 0 3125 0 1000 L 30 * * * * * * * 3019 * 190 * * * * * * * * * * 30 0 * * * * * 0 3125 0 1000 N 31 * * * * * 4356 * * * * * 169 * * * 4015 * * * * 31 0 * * * * * 0 3125 0 1000 Y 32 4640 * * * 4906 * 1538 * 4296 3019 4455 * * * * 4356 * 4682 * 1865 32 0 * * * * * 0 3125 0 1000 P 33 3536 * * * * * * * * 4296 * 3019 572 * * * 4780 5030 * * 33 0 * * * * * 0 3125 0 1000 E 34 * * * 0 * * * * * * * * * * * * * * * * 34 0 * * * * * 0 3125 0 1000 A 35 240 * * * * * * * * * * * * * * * 5071 3019 * * 35 0 * * * * * 0 3125 0 1000 V 36 * * * * * * * 2346 * 2701 * * * * 4455 4906 2974 1174 * * 36 0 * * * * 0 * 3125 0 1000 S 37 377 * * * * * * * * 4931 * * * * * 3703 3056 * * * 37 0 * * * * * * 3153 0 0 I 38 * * * * * * * 2366 * 947 * * * * * * * 4682 * 2010 38 48 * 4931 * * * * 3153 0 0 I 39 * * * * 3036 * * 610 * 2537 * * * * * * * 4302 * * 39 0 * * * * * 0 3141 0 1000 T 40 1690 2847 * * * * * * * 3036 * * * * * 1710 3019 * * * 40 0 * * * * * 0 3141 0 1000 V 41 2672 5335 807 * * 4714 * * * * 4942 * * * * 3387 * 4982 * 4352 41 0 * * * * * 0 3141 0 1000 T 42 3055 * * 1704 2479 * 4226 * * * * 4541 * 2976 * * 3842 * 4069 4627 42 0 * * * * * 0 3141 0 1000 A 43 4036 5045 * * * * * 1850 * 1613 * * * * * * * 1715 * * 43 0 * * * * * 0 3141 0 1000 M 44 * 3874 * * 4445 * 4535 3632 * 1295 3049 * * 4239 * * * 2468 * * 44 0 * * * * * 0 3142 0 1000 E 45 * * 4619 368 * * * * * 4013 * * * * 3029 * * * * * 45 0 * * * * * 0 3142 0 1000 G 46 2741 * * 2709 4770 1550 * * * 3616 3578 * * 4648 4031 * * * * 4239 46 0 * * * * * 0 3142 0 1000 A 47 677 * * * * 4990 3029 3616 * * * * * * * * * 2849 * * 47 0 * * * * 0 * 3142 0 1000 R 48 * * * * * * * * * * * * * * 131 * * * 3528 * 48 0 * * * * * * 3154 0 0 D 49 3667 * 880 2726 * * 4471 * 2460 * * * * * * * * * * * 49 0 * * * * * * 3154 0 0 G 50 * * * * * 185 * * 3051 * * * * * * * * * * * 50 96 3961 * 0 * * * 3154 1408 0 K 51 3704 4356 * * * * 3844 * 2445 * 3470 3063 * 3717 1797 * * 4396 * * 51 184 3063 * 0 * * * 3154 1380 0 S 52 * * 2460 * * 4396 * * * * * 4735 * * * 1249 1862 * 4736 * 52 0 * * * * * * 3154 0 0 V 53 5065 * * * * * * 2572 * 3129 * * * * 4034 * * 791 * 4356 53 0 * * * * * * 3154 0 0 E 54 1056 * 2572 2489 * * * * * * * * 4034 * * 4471 3912 * * * 54 0 * * * * * * 3154 0 0 D 55 4034 * 1992 592 * * * * * * * * * 5360 * * * * * * 55 0 * * * * * * 3154 0 0 V 56 3534 * * * * * * 2232 * 1051 4034 * * * * * * 2672 * * 56 0 * * * * * * 3154 0 0 M 57 * * * * * * * 4941 3025 * 967 * * * 4048 * 4727 2091 * * 57 0 * * * * * * 3189 0 0 K 58 2759 * 3867 2462 * 4412 * * 3266 * * * * 3370 * 1496 * * * * 58 0 * * * * * * 3170 0 0 E 59 2863 * * 3091 5070 3834 3970 4988 * 2733 4039 3061 * * 5382 5627 4548 4056 * 3801 59 0 * * * * * * 3170 0 0 A 60 1751 * * * * 888 * * * 3061 * * * * * * * 4548 * * 60 0 * * * * * * 3170 0 0 S 61 3052 5627 * 4548 * * * * 2139 * * * * 4595 2069 1940 4350 * * * 61 0 * * * * * * 3170 0 0 K 62 5002 * 4681 2758 * * 4139 * 2468 * * * * 5072 4669 3509 1367 * * * 62 0 * * * * * * 3170 0 0 V 63 4548 * * * * * * 3063 * 1352 3051 * * * * * * 1620 * * 63 0 * * * * * * 3170 0 0 L 64 * * * * * * * 4863 * 144 * * * * * * * 4039 * * 64 0 * * * * * * 3170 0 0 T 65 4350 * * * * 1729 * * 3837 * * 3579 * * 3271 * 1351 * * * 65 0 * * * * * * 3170 0 0 K 66 2837 * * 3791 * * 2445 * 2637 * * * 2929 5026 1991 * 5070 * * * 66 0 * * * * * * 3170 0 0 D 67 * * 1078 2491 * 3220 * * * * * 5026 * * 2631 4350 * * * * 67 0 * * * * * * 3170 0 0 D 68 * * 1055 5026 * * 2924 * * * * * * 1489 * * * * * * 68 0 * * * * * * 3170 0 0 V 69 * 4863 * * * * * * * * * * * * * * * 50 * * 69 0 * * * * * * 3170 0 0 M 70 * * * 3970 * * * 4548 * 1417 1213 * * 3512 * * * * * * 70 0 * * * * * * 3170 0 0 D 71 * * 2141 2106 * * * 3061 * * * * 1370 * * 4863 * * * * 71 0 * * * * * * 3170 0 0 G 72 4029 * * 4924 * 254 * * * * * 4681 * * * 5144 * * * * 72 0 * * * * * * 3170 0 0 V 73 * * * * * * * 4236 * * * * * * * * * 79 * * 73 0 * * * * * * 3170 0 0 A 74 1658 4318 * 4548 * * * * * * * * 1032 * * 5026 * 3826 * * 74 0 * * * * * * 3170 0 0 D 75 3437 * 2472 1191 * * 3863 * * * * 5428 * * * 2603 4924 * * * 75 0 * * * * * * 3170 0 0 L 76 * * * * * * * * * 1083 1531 * * * * 3437 4318 4669 * * 76 0 * * * * * * 3170 0 0 I 77 4039 * * * * * * 1347 * 1669 * * * * * * * 2110 * * 77 0 * * * * * * 3170 0 0 P 78 5627 * 2511 2750 * * 2639 4984 2784 * * * 2450 * * 4988 3267 * * * 78 0 * * * * * * 3170 0 0 N 79 4863 * 2799 2121 * * 4595 * 3061 4687 3764 5078 * 4984 4039 5382 2810 5070 * * 79 0 * * * * * * 3170 0 0 V 80 * * * * 3970 * * 1393 * 2905 * * * * * * * 1245 * * 80 0 * * * * * * 3170 0 0 Q 81 * * * 2805 * 5004 * * * * 2654 * 3970 729 * * * * * * 81 0 * * * * * * 3170 0 0 V 82 * * * * 3061 * * 2242 * * * * * * * * * 580 * * 82 0 * * * * * * 3170 0 0 E 83 * * * 184 * * * * * * * * * * * 3061 * * * * 83 0 * * * * * * 3170 0 0 A 84 1143 5301 * * * 1719 * * * 4548 * * 3164 * * * * 3970 * * 84 0 * * * * * * 3170 0 0 I 85 * * * * 4350 * * 5078 * 3290 2986 * * * 3061 * 1109 3192 * * 85 0 * * * * * * 3170 0 0 F 86 * * * * 382 * * 3061 * 4350 3970 * * * * * * * * * 86 0 * * * * * * 3170 0 0 T 87 * * 2165 4215 * * * * * * 5072 * 753 * * 4687 4030 * * * 87 0 * * * * * * 3170 0 0 D 88 4924 * 661 3970 * * 4039 * * 3061 * 4595 * * * 5863 4988 * * * 88 0 * * * * * * 3170 0 0 G 89 * * * * * 184 * * * * * 3061 * * * * * * * * 89 0 * * * * * * 3170 0 0 S 90 * * * * * * * * * * * * 3025 4454 * 3073 489 * * * 90 0 * * * * * * 3189 0 0 R 91 4669 * * * 4798 * * * 553 * * * * * 3204 4376 * * * 3534 91 0 * * * * * * 3189 0 0 L 92 * * * * 3000 * * * * 193 * * * * * * * * * * 92 193 3000 * 0 * * * 3120 1000 0 V 93 4619 * * * * * * 2120 * * * * * * * * * 455 * * 93 0 * * * * * * 3120 0 0 T 94 4603 4400 * * * * 4306 * * * * * * * * 3226 765 2594 * * 94 0 * * * * * * 3120 0 0 V 95 * * * * * * * 2850 * 2590 * * * * * * * 524 * * 95 0 * * * * * * 3120 0 0 H 96 * * 3447 * 3998 * 638 * * * * 3000 * 4746 * * 4619 * * * 96 0 * * * * * * 3120 0 0 D 97 4603 * 1510 2089 * * 2339 * * * * 3213 * 4878 * * 4912 * * * 97 0 * * * * * * 3120 0 0 P 98 * * * * * * * * * * * * 0 * * * * * * * 98 0 * * * * * * 3120 0 0 I 99 * * * * * * * 0 * * * * * * * * * * * * 99 0 * * 0 * * * 2935 0 0 //