HHsearch 1.5 NAME c4xalA_ FAM FILE c4xalA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4xalA_.a3m DATE Sat Jun 27 08:16:13 2015 LENG 90 match states, 90 columns in multiple alignment FILT 13 out of 17 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.8 EVD 0.4204 0.7342 SEQ >ss_dssp CCSSCCCCCSCSSSTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSHHHHHHHHHHCCCCCCCCCGGGHHHHHHHCCC >sa_dssp EEEEEBEDCEDCEDEECEEDEEBDCCBEEBDDDADDCACDCCCEECDEECDEEDEBEDEEDDEDBEEEDEDEDEDECEECBBDCABDCEE >ss_pred CCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHC >ss_conf 987830114689999998657850022677999999999999999999985048899989999999875137886077008999887619 >Consensus xsxkxlxFSxtPxtxxxpWxxxTxxfNkxvFCxAVxxvAaxhAxxAAxalWdxxpPrtneeLdxxLxxaxIrItVxEGxxLlxxAnxxxx >c4xalA_ QSMRKLHFSTAPPNPDAPWTPRVAGFNKRVFCAAVGRLAAMHARMAAVQLWDMSRPRTDEDLNELLGITTIRVTVCEGKNLLQRANELVN >UniRef50_Q9DHC2(133-213:283) UL49 tegument phosphoprotein n=1 Tax=Meleagrid herpesvirus 1 RepID=Q9DHC2_MEHV1 E=3e-25 s/c=1.43 id=41% cov=91% ----KFMFSSAPTSRTSHWKSNTVAFNQHVFCCAVAAVARYHAFRGALALWNKEPPRTDEQLEDFLVRAVVKVTVREGPYLLEEA----- >UniRef50_Q6UDL8(139-226:284) VP22 n=1 Tax=Psittacid herpesvirus 1 RepID=Q6UDL8_9ALPH E=4e-10 s/c=0.75 id=28% cov=92% --------SATPASDSDRWRTTTNPANRSAFVQAVSVTAMAQGELAARAAWEKYKPRNNEDLEKLVETLEIKITVNPGRGLWDVASNIAS >UniRef50_D1FXT3(150-297:345) Tegument protein VP22 n=1 Tax=Felid herpesvirus 1 RepID=D1FXT3_FHV1 E=6e-20 s/c=0.54 id=44% cov=97% --GKTLAFSGTPRTSSTPWRGATHLFNKNIFCGAMAKVAARHAADAAASIWDMEPPSNNDELERLLKKAVIRVTVCEGLNLLHTANNV-- >UniRef50_P09272(136-237:302) Tegument protein VP22 n=5 Tax=Varicellovirus RepID=VP22_VZVD E=7e-18 s/c=0.85 id=47% cov=98% ASGRPISFSTAPKTATSSWCGPTPSYNKRVFCEAVRRVAAMQAQKAAEAAWNSNPPRNNAELDRLLTGAVIRITVHEGLNLIQAANE--- >UniRef50_P30022(141-258:258) Tegument protein VP22 n=2 Tax=Varicellovirus RepID=VP22_BHV1C E=3e-14 s/c=0.71 id=42% cov=101% ASGRPLAFSAAPKTPKAPWCGPTHAYNRTIFCEAVALVAAEYARQAAASVWDSDPPKSNERLDRMLKSAAIRILVCEGSGLLAAANDILA >UniRef50_Q8B636(26-127:168) ORF11-like protein (Fragment) n=1 Tax=Canid herpesvirus 1 RepID=Q8B636_9ALPH E=6e-36 s/c=1.18 id=39% cov=97% SSSKPISFSNTPKTPKSPWYGATHLYNKNVFCEAVRRCASKHAIEAASSIWDLNPPQSNEELEKFLTKAVIRITISEGLGILKTAN---- >UniRef50_A4ZX80(44-252:253) Tegument protein UL49 n=1 Tax=Duck enteritis virus RepID=A4ZX80_9HERP E=9e-36 s/c=0.67 id=42% cov=101% AttvLKKSLAFSNTPETSTTQWKTSTISFNKRIFCEAIGAVAAHQGRLAAAALWDRHSPRNNESLDALLEIAMVKITVCEGLELLEIANEYIK >UniRef50_P28960(107-274:304) Tegument protein VP22 n=5 Tax=Varicellovirus RepID=VP22_EHV1B E=1e-29 s/c=0.69 id=48% cov=97% NsikSGKGLAFSGTPKTPKSQWYGATHLFNKNVFCAAVSRVAAAHASDAASALWDLNPPKTNEDLDRFLKAAAIRILVCEGAQLLEVAN---- >UniRef50_Q5PP88(75-237:249) UL49 tegument protein n=3 Tax=Suid herpesvirus 1 RepID=Q5PP88_9ALPH E=4e-18 s/c=0.71 id=47% cov=99% --RRRLAFSDRPCEANVPWRGATHAFNKRIFCAAVGRVAEAHARAAAESLWDMNPPTTDAALDRFLQAAVVRITVCEGLDLIEAANAVLD # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * Q 1 782 * * * * * * * * * * 2998 * 2808 * 2732 * * * * 1 497 1780 * 1585 585 * * 2151 1405 0 S 2 2872 * * * * * * * * 2590 * * * * * 520 * * * * 2 0 * * * * * * 2151 0 0 M 3 3173 * * * * 1249 * * 2945 * 3147 * * * 3196 3101 * * * * 3 0 * * * * * * 2249 0 0 R 4 * * * * * * * * 848 * * * * * 1171 * * * * * 4 0 * * * * * * 2249 0 0 K 5 * * * * * 3745 * * 1385 * * * 1891 * 3525 3298 3568 * * * 5 0 * * * * * * 2480 0 0 L 6 * * * * 2319 * * 2498 * 684 * * * * * * * * * * 6 0 * * * * * * 2480 0 0 H 7 895 * * * * * 2455 * * * 3283 * * * * 2498 * * * * 7 0 * * * * * * 2480 0 0 F 8 * * * * 0 * * * * * * * * * * * * * * * 8 0 * * * * * * 2480 0 0 S 9 * * * * * * * * * * * * * * * 0 * * * * 9 0 * * * * * * 2847 0 0 T 10 1889 * 3769 * * 2977 * * * * * 2714 * * * 3583 1767 * * * 10 0 * * * * * * 2847 0 0 A 11 1152 * * * * * * * * * * * * * 3769 * 1069 * * * 11 0 * * * * * * 2847 0 0 P 12 * * * * * * * * * * * * 0 * * * * * * * 12 0 * * * * * * 2847 0 0 P 13 3436 3769 * 3707 * * * * 1883 * * * 3678 * 3845 2443 2690 * * * 13 0 * * * * * * 2847 0 0 N 14 * * * 3769 * 3252 * * * * * 3678 * * * 1616 1261 * * * 14 0 * * * * * * 2847 0 0 P 15 2200 * 2341 * * * * * * * * * 1492 * 3583 2774 * * * * 15 0 * * * * * * 2847 0 0 D 16 * * 3678 3252 * * * * 2280 * * 3769 * * * 2054 1752 * * * 16 0 * * * * * * 2847 0 0 A 17 2170 * 2341 * * * * * * * * * * * * 1470 2774 3769 * * 17 0 * * * * * * 2847 0 0 P 18 * * * * * * 3583 * * * * * 873 2900 3436 3937 3663 * * * 18 0 * * * * * * 2847 0 0 W 19 * * * * * * * * * * * * * * * * * * 0 * 19 0 * * * * * * 2847 0 0 T 20 * 2858 * * * * 3252 * 2643 * * * * * 1670 * 2741 * * 2908 20 0 * * * * * * 2847 0 0 P 21 * * * * * 1272 * * * * * * 2741 * * 2622 1868 * * * 21 0 * * * * * * 2847 0 0 R 22 1856 * * * * * * * * * * 2622 2858 * 2741 2462 3436 * * * 22 0 * * * * * * 2847 0 0 V 23 * * * * * * * * * * * * * * * * 234 2741 * * 23 0 * * * * * * 2847 0 0 A 24 2741 * * * * * 1520 2462 * * * 3436 3937 * * * * 2622 * * 24 0 * * * * * * 2847 0 0 G 25 1697 * * * * 2741 * * * 2302 * * 2341 * * 2817 * * * * 25 0 * * * * * * 2847 0 0 F 26 2341 * * * 764 * * * * * * * * * * * * * * 2226 26 0 * * * * * * 2847 0 0 N 27 * * * * * * * * * * * 0 * * * * * * * * 27 0 * * * * * * 2847 0 0 K 28 * * * * * * * * 817 * * * * 2622 1889 * * * * * 28 0 * * * * * * 2847 0 0 R 29 * * * * * * 3583 * * * * 2302 * * 1172 2341 3784 * * * 29 0 * * * * * * 2847 0 0 V 30 2341 * * * * * * 1775 * * 3663 * * * * * 3806 1473 * * 30 0 * * * * * * 2847 0 0 F 31 * * * * 0 * * * * * * * * * * * * * * * 31 0 * * * * * * 2847 0 0 C 32 * 317 * * * * * * * * * * * * * * * 2341 * * 32 0 * * * * * * 2847 0 0 A 33 1835 3583 * 1784 * 2751 * * * * * * * 2341 * * * * * * 33 0 * * * * * * 2847 0 0 A 34 0 * * * * * * * * * * * * * * * * * * * 34 0 * * * * * * 2847 0 0 V 35 * * * * * * * 3707 * * 3845 * * * * * * 228 * * 35 0 * * * * * * 2847 0 0 G 36 1715 * * * * 1739 * * * * * * * * 2825 1973 * * * * 36 0 * * * * * * 2847 0 0 R 37 2643 * * * * * * * 3845 3784 * * * * 1246 * 3663 2341 * * 37 0 * * * * * * 2847 0 0 L 38 * 3721 * * * * * * * 3678 * * * * * * 2341 624 * * 38 0 * * * * * * 2847 0 0 A 39 0 * * * * * * * * * * * * * * * * * * * 39 0 * * * * * * 2847 0 0 A 40 1026 * * 3769 * * * * * * 2341 * * 3663 3583 3721 * * * * 40 0 * * * * * * 2847 0 0 M 41 1608 * * 3784 * * 3707 * 3721 * 2802 * * * 3845 * 3806 * * 2622 41 0 * * * * * * 2847 0 0 H 42 * * * * * * 766 * * * * * * 1560 * * * * * 3784 42 0 * * * * * * 2847 0 0 A 43 267 * * * * 2565 * * * * * * * * * * * * * * 43 0 * * * * * * 2847 0 0 R 44 3845 * * 2341 3583 * * 3721 * * * * * 3937 1426 4123 * * * 3663 44 0 * * * * * * 2847 0 0 M 45 3769 * 2977 3721 * * * * 3937 1868 2741 * * 2722 3583 * * * * * 45 0 * * * * * * 2847 0 0 A 46 256 * * * * 2622 * * * * * * * * * * * * * * 46 0 * * * * * * 2847 0 0 A 47 0 * * * * * * * * * * * * * * * * * * * 47 0 * * * * * * 2847 0 0 V 48 1785 * * 2850 * * * * * 2622 * * * * 2341 2908 * 3678 * * 48 0 * * * * * * 2847 0 0 Q 49 1139 * * 3252 * * * * * * * * * 2741 * 1779 * * * * 49 0 * * * * * * 2847 0 0 L 50 2665 * * * * * * 2782 * 945 * * * * * * * 2493 * * 50 0 * * * * * * 2847 0 0 W 51 * * * * * * * * * * * * * * * * * * 0 * 51 0 * * * * * * 2847 0 0 D 52 * * 557 3436 * * * * * * * 2749 * * 3663 * * * * * 52 0 * * * * * * 2847 0 0 M 53 * * * * * * * * 2508 2288 2178 * * 3663 3707 2858 * 3252 * * 53 0 * * * * * * 2847 0 0 S 54 * * 2722 2708 * * 3707 * * * * 1879 * * * 2741 3252 * * 3436 54 0 * * * * * * 2847 0 0 R 55 * * * * * * 3806 * 2341 * * * 795 * 3678 3707 * * * * 55 0 * * * * * * 2847 0 0 P 56 * * * * * * * * * * * * 0 * * * * * * * 56 0 * * * * * * 2847 0 0 R 57 * * * * * * * * 2943 * * * * 3721 619 3845 3769 * * * 57 0 * * * * * * 2847 0 0 T 58 * * * * * * * * * * * 1414 * * * 2752 1070 * * * 58 0 * * * * * * 2847 0 0 D 59 * * 1706 * * * * * * * * 528 * * * * * * * * 59 0 * * * * * * 2847 0 0 E 60 2850 * 3845 542 * * * * * * * * * * 3252 * * * * * 60 0 * * * * * * 2847 0 0 D 61 3769 * 2134 1101 * * * * * * * * * 3583 3784 3707 * * * * 61 0 * * * * * * 2847 0 0 L 62 * * * * * * * * * 0 * * * * * * * * * * 62 0 * * * * * * 2847 0 0 N 63 * * 1237 1638 * * * * * * * 2741 * * 3252 * * * * * 63 0 * * * * * * 2847 0 0 E 64 2685 * 1944 3678 * * * * 2572 * * * * * 1564 * * * * * 64 0 * * * * * * 2847 0 0 L 65 * * * * 1438 * * * * 1141 2493 * * * * * * * * * 65 0 * * * * * * 2847 0 0 L 66 * * * * * * * * * 317 * * * * * * * 2341 * * 66 0 * * * * * * 2847 0 0 G 67 * * * 2565 * 2741 * * 2325 * * * * 3769 3252 3663 2825 3583 * * 67 0 * * * * * * 2847 0 0 I 68 2306 * * 3252 * 3937 * 2692 2782 * * * * * 2622 3784 3436 * * * 68 0 * * * * * * 2847 0 0 T 69 615 * * * * * * * * 2341 * * * * * * 2741 * * * 69 0 * * * * * * 2847 0 0 T 70 2943 * * 2341 * * * * * * 3707 3806 * * * * 3678 1163 * * 70 0 * * * * * * 2847 0 0 I 71 * * * * * * * 383 * * * * * * * * * 2099 * * 71 0 * * * * * * 2847 0 0 R 72 * * * * * * * * 1594 * * * * * 827 * 3252 * * * 72 0 * * * * * * 2847 0 0 V 73 * * * * * * * 379 * * * * * * * * * 2113 * * 73 0 * * * * * * 2847 0 0 T 74 * * * * * * * 2503 * 2943 * * * * * * 528 * * * 74 0 * * * * * * 2847 0 0 V 75 * * * * * * * 1945 * * * * * * * * * 434 * * 75 0 * * * * * * 2847 0 0 C 76 * 1002 * * * * 3937 * * * * 2341 * 3663 3583 3721 * * * * 76 0 * * * * * * 2847 0 0 E 77 * * * 317 * * * * * * * * 2341 * * * * * * * 77 0 * * * * * * 2847 0 0 G 78 * * * * * 0 * * * * * * * * * * * * * * 78 0 * * * * * * 2847 0 0 K 79 4123 * * 3252 * * * * 3678 1210 * * 2622 * 3436 3784 * * * * 79 0 * * * * * * 2847 0 0 N 80 * * 3769 3707 * 2054 * * * * * 1460 * 4123 * 3252 * * * 3583 80 0 * * * * * * 2847 0 0 L 81 * * * * * * * 3721 * 114 * * * * * * * * * * 81 0 * * * * * * 2847 0 0 L 82 * * * * * * * 2850 * 961 3663 * * * * * * 3806 2341 * 82 0 * * * * * * 2847 0 0 Q 83 3784 * 3436 1782 * 3663 3845 * 3721 * * * 3806 2802 * 3252 * * * * 83 0 * * * * * * 2847 0 0 R 84 2243 * * 2622 * * * 3707 * * * * * * 2741 * 2782 1973 * * 84 0 * * * * * * 2847 0 0 A 85 0 * * * * * * * * * * * * * * * * * * * 85 0 * * * * * * 2847 0 0 N 86 * * * * * * * * * * * 385 * * * 3153 3037 * * * 86 0 * * * * * * 2650 0 0 E 87 3210 * 3176 1294 * * * * * * * 2085 * * * 2858 * * * * 87 0 * * * * * * 2617 0 0 L 88 * * * * * * * 1907 * 2174 * * * * * * * 1356 * 3046 88 0 * * * * * * 2589 0 0 V 89 2175 * * * * * * 1751 * 1582 * * * * * * * 2763 * * 89 0 * * * * * * 2395 0 0 N 90 2554 * 2610 * * * * * 2640 * * 2763 * * * 1482 * * * * 90 0 * * 0 * * * 2395 0 0 //