HHsearch 1.5 NAME c4wz1B_ FAM FILE c4wz1B_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4wz1B_.a3m DATE Sat Dec 27 08:19:07 2014 LENG 75 match states, 75 columns in multiple alignment FILT 129 out of 954 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.9 EVD 0.4403 0.9761 SEQ >ss_dssp CCCCGGGBCTTTCSBCSSEEECTTCCEEEHHHHHHHHHHHTSBCTTSCBCCGGGCEECHHHHHHHHHHHHHHHTC >sa_dssp EECDEEBDADCCEDCAECAACBEDDDCBBDECACECAEEDEDEBEEEEECCDEECECCEEBDDDADDCCEEDEEE >ss_pred CCCCHHHCCHHHCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >ss_conf 996745509321241100021468650039999999998778588777244111101421689999998876239 >Consensus txipxxxxCxixxxxxxxpvxxxxgxxfxxxxixxxlxxxxxxPxxxxxLsxxdLixxxxLxxxIkxxxxxRkrx >c4wz1B_ TEIPDIFLCPISKTLIKTPVITAQGKVYDQEALSNFLIATGNKDETGKKLSIDDVVVFDELYQQIKVYNFYRKRE >UniRef50_Q23QU7(997-1064:1098) U-box domain containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23QU7_TETTH E=8e-11 s/c=1.00 id=19% cov=91% --------CALSFCLLKDPVRLPTSHqNVERSMIKKALLDNEIDPFNRQPLKREQLVELPQLKQKLDEWKAQKKKE >UniRef50_A0E1N5(208-273:279) Chromosome undetermined scaffold_73, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0E1N5_PARTE E=8e-08 s/c=0.88 id=17% cov=63% ----EYYTCVITQEAMCEPVLLSSGHTYEKCSINECIRVNGPYDPATRQV------------------------- >UniRef50_A9UXJ6(32-103:523) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UXJ6_MONBE E=5e-07 s/c=0.77 id=21% cov=32% ----------------------------------------------SKDCGISDMIPNIGLSHVLEMYR------ >UniRef50_A5DYK4(1399-1464:1729) Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DYK4_LODEL E=3e-06 s/c=0.80 id=18% cov=83% ------MMCIICRCEITSGSLTKCGHKFCKECLQHWMRNSQFCPMCKDRIQAGSVYNFNRFAQNLKA-------- >UniRef50_Q9M0R4(119-187:357) Putative RING-H2 finger protein ATL4D n=2 Tax=Arabidopsis thaliana RepID=ATL4D_ARATH E=5e-05 s/c=0.71 id=20% cov=33% ------------------------------------------------NLSLKSGDSFPHPSMDVETGNAQR--- >UniRef50_UPI0000D57311(189-253:295) PREDICTED: similar to CG11982 CG11982-PA isoform 2 n=1 Tax=Tribolium castaneum RepID=UPI0000D57311 E=0.0006 s/c=0.70 id=18% cov=23% --------------------------IYHEPCIRPWLELHGT--------------------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * 2027 406 * * * 1 0 * * * * * * 4206 0 0 E 2 * * 2048 1449 * * * * 3528 * * * 4544 2553 * 3442 * * * * 2 0 * * * * * * 5287 0 0 I 3 4167 * * * 4615 * * 1195 * 2553 * * 4679 * * * * 1959 * * 3 33 5479 * 0 * * * 5671 1000 0 P 4 5315 * 5354 3559 * * * * 4597 * * * 353 * * 4592 * * * * 4 29 * 5675 * * * * 5788 0 0 D 5 4624 * 1602 2630 * 5103 5636 5904 * * * 5600 4311 3844 5210 2832 3683 5923 * * 5 28 5707 * 2000 415 0 * 6020 1000 1000 I 6 3912 * 3112 2333 4106 6013 5643 6164 6105 3637 4676 4962 * 4905 4087 4843 3864 5138 6278 3200 6 0 * * * * * * 6097 0 0 F 7 6646 6064 * * 1492 5769 * 5154 * 1765 4099 * * 6089 6160 * * 5939 * 2510 7 0 * * * * * * 6002 0 0 L 8 * 3218 5945 4254 4241 * * 2567 4680 2561 5544 4631 * 4223 4618 5703 3343 3416 * 5251 8 0 * * * * * * 6020 0 0 C 9 * 318 2475 * * 5775 * * * * * * * * * * * * * * 9 0 * * * * * * 5980 0 0 P 10 2793 6131 5646 * 6529 3831 5783 6138 4442 * * 5560 974 4855 * 3752 6561 6323 * * 10 22 6052 * 2000 415 * * 5980 1000 0 I 11 * * * * 5912 * * 744 * 1876 5126 * * * * * * 3551 * * 11 0 * * * * * * 5980 0 0 S 12 * 1401 5464 6383 * 6273 * * * 5684 5364 6098 * * * 2077 1844 * * * 12 19 6241 * 0 * * * 5980 1000 0 K 13 5728 5967 6017 5470 3116 2429 4157 * 2843 2489 4259 5674 * 3505 4668 5827 * * * 4806 13 0 * * * * * * 5980 0 0 T 14 5577 3980 2567 2304 6405 4270 5426 * 3623 4591 * 3992 * 4527 5278 3441 3490 5520 * * 14 0 * * * * * * 5980 0 0 L 15 6323 * 5360 * 4682 * * 2023 6592 2003 5742 6466 2835 5593 * 6831 5044 2577 6657 6524 15 0 * * * * * * 5980 0 0 I 16 6241 6462 * * 2301 * * 3421 * 3014 1361 * 4372 6250 5681 * * 4013 * 5436 16 13 6843 * 1000 1000 * * 5981 1000 0 K 17 * 4912 4267 2618 4207 * 5841 6141 2511 6111 * 4327 * 4548 3005 4887 2787 3922 * 6104 17 19 6231 * 1585 585 * * 5981 1000 0 T 18 6532 5083 1365 2686 * 7574 4839 5081 6386 * * 3179 6250 4108 5292 4065 5784 4795 * 6223 18 24 5931 * 0 * * * 5981 1677 0 P 19 3456 6444 * 5858 6481 5098 * * * 6324 * * 404 * * * 4458 5260 * * 19 12 6910 * 0 * * * 5981 1000 0 V 20 4249 5042 * * 5744 * * 6628 5993 5277 3670 * * 6875 * 5366 4952 576 * 4961 20 0 * * * * * * 5980 0 0 I 21 4862 3798 * 5541 * * * 2571 4671 2813 3391 * * 5536 4062 3908 3470 2405 * * 21 62 5034 6465 1410 681 * * 5986 2285 0 T 22 3232 5258 5199 * 6111 6914 * 4207 * 2256 * 5544 6062 * * 2858 1457 6029 * * 22 25 5888 * 0 * 0 * 5967 1619 1000 A 23 3589 5545 5815 4542 * * 6437 6279 3290 7007 5331 * 1347 6319 4576 3108 3695 4842 * * 23 129 3548 * 304 2396 * * 5983 2957 0 Q 24 * 1382 2766 4228 * 6211 * * 6560 5665 * 5853 * 4620 * 2392 3497 * * 4837 24 0 * * * * * * 6376 0 0 G 25 5874 4931 4883 * * 473 * * 4463 * * 4345 * 5410 4623 4745 * * * * 25 18 6366 * 0 * * * 6376 1000 0 K 26 4426 6797 6847 5525 5391 * 1277 3953 3772 * 5118 4628 6767 5440 4319 * 4601 4439 * 3307 26 29 5641 * 0 * * * 6376 1661 0 V 27 6241 * 6614 * 5783 * * 2973 6602 3891 * 3927 * * 5225 2820 1882 2091 * 6227 27 15 6579 * 0 * * * 6382 1000 0 Y 28 * 6504 * * 1124 * * 6281 * * 5902 * * * * * 6412 3554 * 1308 28 0 * * * * * * 6386 0 0 D 29 * 1644 2185 1426 * 6240 4589 * * * * 6307 * 6707 * 6518 * * * * 29 0 * * * * * * 6383 0 0 Q 30 7703 * 5543 4301 6290 * 7050 6964 2143 6841 7582 5438 5825 3512 1315 4079 * * 4925 4973 30 0 * * * * * * 6383 0 0 E 31 3505 6391 3951 2984 5798 5483 5570 6031 3025 4513 5278 * 4280 4415 3588 2388 4183 6347 * * 31 0 * * * * * * 6383 0 0 A 32 2690 1378 5840 6603 5465 6672 * * * 4496 * 4169 * * * 3292 2978 4401 5379 * 32 0 * * * * * * 6383 0 0 L 33 * * * * 5621 * * 723 * 1782 * * * * * * * 3850 * 6195 33 0 * * * * * * 6383 0 0 S 34 5352 * 4005 1974 * * 6340 3879 3741 3267 5789 4680 * 3541 4107 4297 4726 3585 * 5229 34 0 * * * * * * 6463 0 0 N 35 4274 * 4013 2488 * 5828 5111 * 2502 * 6589 3859 4168 3091 3159 4255 4118 6545 * * 35 0 * * * * * * 6463 0 0 F 36 4278 4810 * 5365 4340 * 2461 * * 5650 * * * * * 5639 * 4930 1282 2527 36 0 * * * * * * 6463 0 0 L 37 * 5368 * * 3456 6637 * 2526 * 1056 3959 * * 5937 * * 6106 3156 6309 * 37 29 5655 * 0 * * * 6468 1523 0 I 38 3999 * 3774 3283 * 6034 * 5002 2718 3128 4085 5402 * 3513 2953 4823 4565 3797 * * 38 0 * * * * * * 6388 0 0 A 39 4158 * 5171 3471 * 4609 4678 6207 2981 4659 7181 3622 * 3683 3637 2635 3354 4316 * 6515 39 39 5217 * 1000 1000 * * 6367 1621 0 T 40 4774 6378 4319 5125 5437 3879 2943 * 3733 6210 5922 2252 6502 4263 4664 3360 3877 4989 * 4761 40 0 * * * * * * 6367 0 0 G 41 6360 * 4031 5152 6755 1172 5764 * 3506 * 6459 3576 4072 4560 4662 3569 7186 * * 6467 41 79 4575 6427 562 1632 * * 6358 2612 0 N 42 6329 * 6612 3915 5942 6799 3905 5150 3209 * * 2755 5951 6182 3457 3239 2046 4388 * 5819 42 75 4309 * 641 1480 0 * 6348 2495 1000 K 43 * 1477 2017 * 4485 * 6136 5590 4021 * * 4654 * * 6150 3185 4688 5661 * 5056 43 67 5138 5885 1737 515 * * 6484 1622 0 D 44 * 3913 3093 * * * * * * * * * 409 * * 3978 * * * * 44 0 * * * * * 0 6392 0 1000 E 45 4739 7070 * 4753 4064 6167 * 3239 4385 3037 4272 4861 2444 4786 * 6197 4487 2378 * 6394 45 67 4470 * 1172 847 * 0 6392 2085 1000 T 46 5829 2227 5326 * * * 6153 4943 * 4797 * 3651 * * * 3146 1297 4016 * * 46 78 4247 * 596 1564 * 0 6392 2767 1000 G 47 * 6660 4222 6082 * 1596 5108 * 4410 * 5423 4191 * 4020 2019 3867 4062 * * * 47 16 6473 * 0 * * 0 6397 1000 1000 K 48 3374 5545 5948 2470 * 5369 6656 * 2636 5789 4947 4599 * 3085 3378 3850 3910 4717 * 6543 48 0 * * * * 0 * 7195 0 1000 K 49 4982 * 4145 3136 * * 8046 6076 2606 8112 * 5466 1943 3335 3718 4273 5422 4399 * 4993 49 20 6150 * 0 * * * 7248 1000 0 L 50 5285 5546 * * 4355 * * 2550 5870 931 4963 * 6275 * * 4526 4850 3864 * * 50 17 6386 * 1000 1000 * * 8026 1000 0 S 51 5286 5846 4748 4159 * 4686 6601 5803 3657 4294 * 6219 5675 5131 4132 1767 2143 6115 6232 * 51 24 5941 * 1585 585 * * 8002 1000 0 I 52 4228 * 4462 4034 * * 5956 2586 3412 2986 5556 4683 4516 6209 4006 3009 4601 3437 * * 52 0 * * * * * * 8921 0 0 D 53 5249 5660 2031 2764 * 6490 4940 * 3527 * * 4210 * 3719 4547 2711 3461 * * 6027 53 0 * * * * * * 8924 0 0 D 54 5242 * 1007 3679 * 5373 6468 * 5370 * 6180 2955 * 4382 5101 3323 5752 * * * 54 0 * * * * * * 8151 0 0 V 55 4746 6314 * * 4725 5329 * 3436 * 948 5071 5143 * 5810 * 4966 * 2566 * * 55 0 * * * * * * 8131 0 0 V 56 5412 * 4643 4840 5110 5753 * 1822 3337 3434 * 6236 * 4778 4764 6339 4745 2224 * 5081 56 67 4472 * 1585 585 * * 8163 2157 0 V 57 4188 * * 3983 5523 6016 * 4661 3694 4621 * 5886 1771 6068 * 3956 3345 2750 * 4297 57 26 5782 * 1585 585 * * 9091 1000 0 F 58 3888 * 3669 5227 2520 * * 3908 5180 3939 5097 1661 * 4970 * 4629 * 3723 * * 58 0 * * * * * * 8721 0 0 D 59 6377 * 2515 4024 * * 3733 3687 2760 4098 * 4288 2920 * 3399 * 3972 5881 * 4881 59 37 5294 * 0 * * * 8746 1000 0 E 60 3141 * 3016 2516 * 4229 3937 * 6697 4479 * 4826 4707 3368 * 3816 2776 5176 * * 60 0 * * * * * * 8712 0 0 L 61 * * * 5214 5057 5519 * 3357 * 1114 3938 5213 4935 5372 * * 4792 2801 * 4920 61 0 * * * * * * 9164 0 0 Y 62 4619 5695 4883 * 4710 * 4210 2932 2172 4328 * * 5643 4360 3420 3545 5130 4382 * 3527 62 0 * * * * * * 8663 0 0 Q 63 3237 * 5170 2254 * * 4312 4226 3662 5798 4628 3947 5413 2198 3592 5262 * * * * 63 0 * * * * * * 8530 0 0 Q 64 3164 * 3487 2968 * * * 4411 2944 4476 4174 5135 * 2358 4835 4207 * 3620 * * 64 0 * * * * * * 8533 0 0 I 65 5218 6022 * * * * * 984 * 2604 * * * 4362 * 5335 5594 2565 5340 * 65 18 * 6301 * * * * 8511 0 0 K 66 4963 * 4041 2265 * * * * 1886 * 5280 4589 4362 3427 4889 3901 4378 3818 * * 66 52 5307 6650 1000 1000 * 0 9216 1000 1000 V 67 3103 5159 4460 3172 * * 5127 4425 4820 3278 5474 4517 4269 5235 5653 4146 3701 2413 * * 67 0 * * * * 0 * 8900 0 1613 Y 68 * * 4648 * 2498 4633 3952 4262 * 4906 * * * * 4476 4826 * 4591 2605 1706 68 24 5902 * 0 * * * 8840 1000 0 N 69 * * * 4346 * * * 4594 2282 5512 * 1707 * 4984 2666 4221 4042 3795 * * 69 0 * * * * * * 8847 0 0 F 70 2848 * 4416 3524 5443 * 3610 * 4718 * 3494 4475 4424 3483 * 3967 4884 2790 3788 * 70 0 * * * * * * 8272 0 0 Y 71 * * 4895 2684 4180 * 2717 4612 3330 * 5217 * 4397 3004 4629 4303 * 3611 4860 4137 71 0 * * * * * * 8272 0 0 R 72 * * * 4303 * 4416 * 4883 2958 * * 4327 * 3770 774 4966 * * * * 72 0 * * * * * * 8272 0 0 K 73 3843 * * 2754 * * 4837 * 949 4485 * 4467 4530 4599 4193 * * * * * 73 0 * * * * * * 7686 0 0 R 74 * * * 2588 * * * * 2027 * * 4498 * 3808 1229 4444 * * * * 74 0 * * * * * * 6750 0 0 E 75 * * * 1386 * * * * 2069 * * * * 1718 3737 * * * * * 75 0 * * 0 * * * 5463 0 0 //