HHsearch 1.5 NAME c4hyzA_ FAM FILE c4hyzA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4hyzA_.a3m DATE Mon Jan 14 11:28:50 2013 LENG 114 match states, 114 columns in multiple alignment FILT 11 out of 15 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.7 EVD 0.4107 -0.5379 SEQ >ss_dssp CEEESSCCTTCCHHHHHHHHHHHHHHHHTTCHHHHHTTBCHHHHTTCCHHHHHHHHHHHHTTCSEEEEEEEEEEEEEETTEEEEEEEEEEEETTEEEEEE EEECTTSCEEEEEC >sa_dssp EEECEECBDEBDEEDADECACCAADCACDDDBEDBCDCBBEEDCEECDDDEADDBBDDBDECDEDDECCECECDBDCEEEDDCABBCACADBDEDEBEAD ACACDECCACDBDD >ss_pred CHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCEEEEE EEECCCCCCCCCCC >ss_conf 9046642000179999999999999833110578998745999962398988777751000113676654431021237826899999997515269999 97257653201349 >Consensus xxxxxexxxxFdeexvkexAxxvIxxxnxxdxexlxxxxtxxmkxaLteexxxxxxxxxexxGafxsfxxxxxtxxxxxgxxxxvVxvxakYexxxvxYt lsFDeDmkLaGFxx >c4hyzA_ GEILKELPEGFDKETVRKQAXEDIEIAQSKDYESWKSRFTKDLQSSLTEESYDSYLKILEKQGEFKEFGKCTYLGQIKDNKKYGGVIIVVKYEEGNVNYS LAYDEDXNLVSFTX >UniRef50_B5CTB3(56-158:161) Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CTB3_9FIRM E=0.0004 s/c=0.44 id=30% cov=90% ----------FDEATVKSQAEKVIGYINADDYESLQDVSADKMKEIMTEERLsEAKEKVSDDWGAFKSMGDISTTTISKRGVNAAVAYVTATYENVEIHY TLAFDEDMKLASF-- >UniRef50_C4V172(43-145:148) Putative uncharacterized protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V172_9FIRM E=1e-24 s/c=1.11 id=24% cov=90% ----------FQGDVVQQHMMATIERFEKGDIAGLQAEATKDLRDHLTLDQInEAKGQFAPNWGTRVSVGKTYMTAGQENNAWFVVCEIAVGYQSTAVVY RLSYDANMQLAGF-- >UniRef50_C8WGP2(111-216:219) Putative uncharacterized protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGP2_EGGLE E=4e-20 s/c=0.94 id=22% cov=89% ------------EQQVIEQAQKVAEVVGEGDYDKLRPMLDDAAAEALTEPVMnDAHALFGDDWGALKSFGNTYATGVSQMGMTGNAVNLVAIYENTTVTF DIGFNEDLKIIGL-- >UniRef50_C0FXE1(68-164:167) Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FXE1_9FIRM E=2e-19 s/c=1.00 id=28% cov=85% ----------------KAQAEKIIGLLNAEDFDSLQSLVVPDMQEIMNKERMDEgKARISEDWGDFVSIETMQDAEIIQRGAHIAAVYVTAEYENIEVHY TLAFNEDMKLASF-- >UniRef50_C9L879(28-138:141) Putative uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L879_RUMHA E=1e-18 s/c=0.85 id=28% cov=95% -----KLSDKFDEEEVKNAAKDIVTQVNEGNVESvYNDIFSPVMKNAIALETLQENLSYtLDKVGAFDSFEKIeVAGTKDKDtGTEYATVMVLAKYEEGK AMFTVSFDEDMKCAGF-- >UniRef50_C4G4T3(40-139:143) Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G4T3_ABIDE E=8e-07 s/c=0.55 id=15% cov=88% ------------KEKYIEKAQNVITLFNEEKSDEIVELCDEAMKNALPKDKLSEIYTQIKSNGDFEKFLEGEMTKVEQGGKTFTVVVQQAKYAKNTLTYT ISFDNEDKLAG--- >UniRef50_UPI0001BC534B(36-135:139) hypothetical protein FuD12_07050 n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC534B E=2e-16 s/c=0.87 id=25% cov=88% ------------KEHYREMARHTITSLHEKKSAEIRQSSTEELKKALTEEKCREIYSQLETNGSFETFLDYEISKIQENKQDFIVVAQRVKYSKNTLIYT ISFDKDERLAG--- >UniRef50_Q73JX5(22-132:135) Putative uncharacterized protein n=1 Tax=Treponema denticola RepID=Q73JX5_TREDE E=8e-15 s/c=0.74 id=25% cov=96% ----KETSETFHIPFLKEKAEEIIFMINDKDWEGIRNLSTEEFKKNLDEEFINVNTKiFFEPAGKYLYTKEAYFleTKDKNSGEVIGVVIVKVGYENKTL CYTFNFAKDTKLIGF-- >UniRef50_C0C4W3(24-135:138) Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4W3_9CLOT E=1e-14 s/c=0.72 id=28% cov=96% ----QELPDDFDENEVKKAAEEVIDLVNAGEYEKLtEEKWNAQLKTALPAEKMSEEIQpVIEELGAFQSFEnEAVAGGEDKDTEQeFAVVVVKAKYEERK VQFTISFDKNMKTAGF-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 E 2 * * * 0 * * * * * * * * * * * * * * * * 2 0 * * * * * * 1000 0 0 I 3 * * * * * * * 0 * * * * * * * * * * * * 3 0 * * * * * * 1000 0 0 L 4 * * * * * * * * * 0 * * * * * * * * * * 4 0 * * * * * * 1000 0 0 K 5 * * * * * * * * 585 * * * * 1585 * * * * * * 5 0 * * * * * * 2135 0 0 E 6 * * * 396 * * * * 2060 * * * * * * * * * * * 6 0 * * * * * * 2426 0 0 L 7 * * * * * * * * * 468 * * * * * * 1851 * * * 7 0 * * * * * * 2426 0 0 P 8 * * * * * * * * * * * * 1050 * * 951 * * * * 8 0 * * * * * * 2426 0 0 E 9 * * 1095 911 * * * * * * * * * * * * * * * * 9 0 * * * * * * 2426 0 0 G 10 * * 2132 * * 1973 * * 2060 * * * * * * * 1851 * * * 10 0 * * * * * * 2426 0 0 F 11 * * * * 0 * * * * * * * * * * * * * * * 11 0 * * * * * * 3188 0 0 D 12 * * 523 * * * 2546 * * * * * * 2911 * * * * * * 12 0 * * * * * * 3188 0 0 K 13 * * * 1028 * 3423 * 3151 1719 * * * * * * * * * * * 13 0 * * * * * * 3853 0 0 E 14 3334 * 3423 1295 * * * * 3503 * * 3486 3151 3184 * * * * * * 14 0 * * * * * * 3853 0 0 T 15 * * * 2373 3151 * 3335 * 3363 * * * * 3184 * * 2275 2463 * * 15 0 * * * * * * 3853 0 0 V 16 * * * * * * * * * 2316 * * * * * * * 730 * 2349 16 0 * * * * * * 3853 0 0 R 17 * * * 3594 * * * 2399 1164 * * * * 3486 2379 * * * * * 17 0 * * * * * * 3924 0 0 K 18 3668 * * 1358 * * * * 2464 * * 3367 * 2539 * 3627 * * * * 18 0 * * * * * * 3924 0 0 Q 19 2472 * * * * * 2539 * 2356 * 3407 * * 1482 * * * * * * 19 0 * * * * * * 3924 0 0 A 20 272 * * * * * * * * * 3486 * * * * * * 3594 * * 20 0 * * * * * * 3924 0 0 X 21 * * * 1359 * * * * 3196 * 2386 * * 2285 3260 * * * * * 21 0 * * * * * * 3757 0 0 E 22 2539 * 3367 1798 * * 3407 * 1943 * * 3489 * * * * * * * * 22 0 * * * * * * 3924 0 0 D 23 * * 3353 * * * * 1827 * * * * * * * * 1909 1499 * * 23 0 * * * * * * 3924 0 0 I 24 3314 * * * * * * 474 * * * * * * * * * 2476 * * 24 0 * * * * * * 3924 0 0 E 25 3594 * 3585 1797 3234 2647 * * * * * * * * * * 1835 * * * 25 0 * * * * * * 3924 0 0 I 26 * * * * * * * 3353 * 1994 3234 * * 3367 2539 3407 * 3314 * 3627 26 0 * * * * * * 3924 0 0 A 27 3353 * * * 1937 * * 2417 * 2531 * * * * * * * 1833 * * 27 0 * * * * * * 3924 0 0 Q 28 * * * 2539 * 3314 3407 * * * * 902 * 3353 * * * * * * 28 0 * * * * * * 3924 0 0 S 29 2041 * 3234 1393 * * * * 2539 * * * * * * 3353 * * * * 29 0 * * * * * * 3924 0 0 K 30 * * 3627 2576 * 1143 * * 1744 * * * * * * * * * * * 30 0 * * * * * * 3924 0 0 D 31 * * 652 3585 * * * * 2447 * * 3367 * * * * * * * * 31 0 * * * * * * 3924 0 0 Y 32 * * * * 3668 * * 2539 * * * * * * * 2447 * 3367 3234 1463 32 0 * * * * * * 3924 0 0 E 33 2446 * 1510 1104 * * * * * * * * * * * * * * * * 33 0 * * * * * * 3924 0 0 S 34 * * * 2447 * 1845 * * 2443 * * * * * * 1496 * * * * 34 147 3367 * 0 * * * 3924 1000 0 W 35 * * * * * * * 1788 * 956 * * * * * * * * 3353 3367 35 126 3585 * 0 * * * 3924 1000 0 K 36 * * * 3585 * * * * 3353 * * 3367 * 1592 1732 * * 3489 * * 36 0 * * * * * * 3924 0 0 S 37 2539 * 2491 2536 * * * * * * * 3234 3314 3407 * 2502 * * * * 37 0 * * * * * * 3924 0 0 R 38 * * * 2539 * * * 3367 3585 1868 3314 * * * 3353 3407 * 3627 * * 38 0 * * * * * * 3924 0 0 F 39 2539 3489 * * 2360 * * * * 3314 * * * * * 1829 * 3668 3585 * 39 0 * * * * * * 3924 0 0 T 40 3627 * 2399 * * * * * * * * 3585 * * * 3367 1088 3668 * * 40 0 * * * * * * 3924 0 0 K 41 3585 * 2462 1788 * * * * 2418 * * * 2510 3594 * * * * * * 41 0 * * * * * * 3924 0 0 D 42 2399 * 1520 2317 * * * * 3627 * * * * 3585 * * * 3367 * * 42 0 * * * * * * 3924 0 0 L 43 3314 * * * 3234 * * * * 1455 1223 * * * * * * * * * 43 0 * * * * * * 3924 0 0 Q 44 3314 * * * * * * * 860 * * * * 2502 2539 * * * * * 44 0 * * * * * * 3924 0 0 S 45 3594 * 3486 1943 * * * * 2317 * * 2427 * * * 3353 3585 * * * 45 0 * * * * * * 3924 0 0 S 46 1107 * * * * * 3486 2647 * * * 3234 * 3594 * 3353 * * * * 46 0 * * * * * * 3924 0 0 L 47 * * * * * * * 3367 * 428 2647 * * * * * * * * * 47 0 * * * * * * 3924 0 0 T 48 3367 * 3234 * * * * * * * * 3668 2536 * * * 874 * * * 48 0 * * * * * * 3924 0 0 E 49 2590 * * 1059 * * * * 2576 2425 * * * * * * * * * * 49 0 * * * * * * 3924 0 0 E 50 * * 1937 648 * * * * * * * * 3314 * * * * * * * 50 0 * * * * * * 3924 0 0 S 51 * * * * 3234 * * * 1907 * * * * 2539 2647 3353 3367 3314 * * 51 0 * * * * * * 3924 0 0 Y 52 * 3407 * * * * * 2354 * 1906 1929 * * * * * * 3594 * 3353 52 455 1885 * 0 * * * 3924 2174 0 D 53 * * 1851 2555 * * * * * * * 2403 * 3367 3407 2536 * * * * 53 125 3594 * 0 * * * 3924 1000 0 S 54 1500 * * 1177 * * * * * * * * * * * 3353 * 3234 * * 54 118 3668 * 0 * * * 3924 1000 0 Y 55 * * * 3585 * * 3314 2447 1592 * * 2299 * * * * * * * 3353 55 0 * * * * * * 3924 0 0 L 56 1932 * * 3627 * 3486 * 3585 * 2360 * * * * * * 3234 * * 2447 56 0 * * * * * * 3924 0 0 K 57 * * * * * * * * 1810 3314 * * * 1969 3668 2387 3489 * * * 57 303 2399 * 0 * * * 3924 1652 0 I 58 * * * * 1400 * * 2502 * * * * * 2447 * * * 2606 * 3367 58 147 3367 * 0 * * * 3924 1000 0 L 59 2539 * * * 3234 3314 * 2536 * 1790 * * * * * 2647 * * * * 59 0 * * * * * * 3924 0 0 E 60 * * 1845 1119 * * * * 3489 * * * 2539 * * * * * * * 60 0 * * * * * * 3924 0 0 K 61 * * 1943 3585 * * * * 1849 * * 3486 3234 * * 3489 3407 * * * 61 0 * * * * * * 3924 0 0 Q 62 3234 * * * * * * * * 3585 * 2447 * 3353 * * * 3367 1210 * 62 0 * * * * * * 3924 0 0 G 63 * * * * * 0 * * * * * * * * * * * * * * 63 0 * * * * * * 3924 0 0 E 64 1170 * 2576 3353 * * * * 3234 * * * * * * 3407 3486 * * * 64 0 * * * * * * 3924 0 0 F 65 * * * * 687 * * * * 3314 * * * * 2539 * * * * 3234 65 0 * * * * * * 3924 0 0 K 66 * * 3367 2447 * * * * 1840 3234 * * * 3585 * * * 1996 * * 66 0 * * * * * * 3924 0 0 E 67 * * * 3353 * * * * 3489 * * * * * * 707 3407 * * 3234 67 0 * * * * * * 3924 0 0 F 68 * * * * 831 * * 3668 * * 3627 * * * * 3594 3234 3486 * * 68 0 * * * * * * 3924 0 0 G 69 * * * 1949 * 1147 * * 3234 2447 * * * * * * * * * * 69 126 3585 * 0 * * * 3924 1000 0 K 70 * * 2513 1843 * * * * 1447 * * 3314 * * * * 3668 * * * 70 0 * * * * * * 3924 0 0 C 71 2399 3353 * * * 3489 * 2491 * * 2630 * * * * * 2398 * * 3407 71 147 3367 * 0 * * * 3924 1000 0 T 72 * * * 2447 * * * * * * * * * 3668 * 3627 3353 2472 * 1400 72 0 * * * * * * 3924 0 0 Y 73 1833 * 3668 * 3234 * * 3407 * * 1937 * * * * * 3627 * * 3353 73 162 3234 * 1000 1000 * * 3924 1000 0 L 74 3668 * * * * 2472 * * * 3353 * * * * * 3407 865 * * * 74 0 * * * * * * 3924 0 0 G 75 2539 * * 3668 * 1827 * * 1788 * * * * * * * 2491 * * * 75 0 * * * * * * 3924 0 0 Q 76 * * 3234 3585 * 2539 * 1977 3367 * * * * 3353 * * * 2399 * * 76 0 * * * * * * 3924 0 0 I 77 * * 2472 3489 * * * 2502 3234 * * * * 1909 * 2462 * * * * 77 0 * * * * * * 3924 0 0 K 78 * * * 1909 * * * * 1478 * * 3234 * 1898 * * * * * * 78 0 * * * * * * 3924 0 0 D 79 * * 1846 * * 3489 * * * * 3314 1909 * * 2647 3234 * * * * 79 147 3367 * 0 * * * 3924 1000 0 N 80 * * * * * 655 * * 3407 * * 2418 * * * * 3585 * * * 80 0 * * * * * * 3924 0 0 K 81 1996 * * 2399 * * * * 2419 * 3314 * * 3407 * * 3367 3627 * * 81 0 * * * * * * 3924 0 0 K 82 * * 3407 3367 * * 3668 * 3353 * * 3627 * 3585 * * 2399 3234 2539 * 82 126 3585 * 0 * * * 3924 1000 0 Y 83 3627 * * * 1189 3314 * 2434 * * * * * * * * * * * 2360 83 0 * * * * * * 3924 0 0 G 84 1242 * * * * 2292 * 3407 * * * 3314 * * * * 3489 3486 * * 84 0 * * * * * * 3924 0 0 G 85 2480 * * * * 3353 * * * * * * * * * * 3367 676 * * 85 0 * * * * * * 3924 0 0 V 86 3627 2539 * * * * * * * * * * * * * * * 421 * * 86 0 * * * * * * 3924 0 0 I 87 3407 * * 2539 * * * 2292 * * 3367 3314 * * * * * 2536 * 2647 87 0 * * * * * * 3924 0 0 I 88 * * * * * * * 1889 * 3314 * * * 2447 * * * 1164 * * 88 0 * * * * * * 3924 0 0 V 89 2539 * * * * * * * 2399 3367 * * * 3489 3407 * 2647 2333 * * 89 0 * * * * * * 3924 0 0 V 90 917 * * * * * * * * * * * * * * * * 1088 * * 90 0 * * * * * * 3924 0 0 K 91 * * * 3668 * 1845 * 3314 1116 * * * * * * * 3627 * * * 91 0 * * * * * * 3924 0 0 Y 92 * * * * * * * * * * * * * * * * * * * 0 92 0 * * * * * * 3924 0 0 E 93 3489 * * 634 * * * * 3594 * * * * 3486 * 3407 * * * * 93 0 * * * * * * 3924 0 0 E 94 * * * 1470 * * * * 2447 * * 1448 * * * 3486 * * * * 94 0 * * * * * * 3924 0 0 G 95 * * * * * 2360 * 3668 3234 * * 2447 * * 3585 * 1875 3627 * * 95 0 * * * * * * 3924 0 0 N 96 2539 * * 2647 * * * * 2472 * * 3353 * * * * 1358 * * * 96 0 * * * * * * 3924 0 0 V 97 3367 * * * * * * 3627 * 1788 * * * * * * * 909 * * 97 0 * * * * * * 3924 0 0 N 98 * 3234 * * * * 2647 3407 * * 3367 3353 * 3585 * * 2399 2539 * * 98 0 * * * * * * 3924 0 0 Y 99 * * * * 1833 * * * * * * * * * * * * * * 475 99 0 * * * * * * 3924 0 0 S 100 * * 3314 * * * * * * * * * * * 2539 3353 668 * * * 100 0 * * * * * * 3924 0 0 L 101 * * * * 3234 * * 1445 * 1219 * * * * * * * 3367 * * 101 0 * * * * * * 3924 0 0 A 102 1957 * * * * 3314 * * * * * 3234 * * * 901 * * * * 102 0 * * * * * * 3924 0 0 Y 103 * * * * 454 * * * * * * * * * * * * * * 1889 103 0 * * * * * * 3924 0 0 D 104 3234 * 485 * * * * * * * * 2480 * * * * * * * * 104 0 * * * * * * 3924 0 0 E 105 2539 * * 1136 * * * * 1816 * * 3489 * * * * * * * * 105 0 * * * * * * 3924 0 0 D 106 * * 609 3489 * * * * * * * 1969 * * * * * * * * 106 0 * * * * * * 3924 0 0 X 107 * * 3389 3260 * * * * * 3188 804 * * * * * 3089 * * * 107 0 * * * * * * 3757 0 0 N 108 * * * * * * * * 653 * * 2468 * 3486 3407 * * * * * 108 0 * * * * * * 3924 0 0 L 109 * 3367 * * * * * 3314 * 475 * * * * * * 3585 * * * 109 0 * * * * * * 3924 0 0 V 110 524 * * * * * * 2274 * * * * * * * * * 3353 * * 110 0 * * * * * * 3924 0 0 S 111 * * * * * 430 * * * * * * * * * 1957 * * * * 111 0 * * * * * * 3924 0 0 F 112 * * * * 207 * * * * 2905 * * * * * * * * * * 112 0 * * * * * * 3498 0 0 T 113 * * * * * * * * * * * * * * * * 0 * * * 113 0 * * * * * * 1000 0 0 X 114 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 114 0 * * 0 * * * 1000 0 0 //