HHsearch 1.5 NAME c4dpoA_ FAM FILE c4dpoA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4dpoA_.a3m DATE Sat Mar 3 11:43:55 2012 LENG 102 match states, 102 columns in multiple alignment FILT 111 out of 828 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 8.6 EVD 0.4153 -1.3960 SEQ >ss_dssp CHHHHHHHCEEEEEEEEBCTTTHHHHHHHHHHHHHHHHTSTTEEEEEEEEETTEEEEEEEEEEESSHHHHHHHHTSHHHHHHHHHHHHTBSSCCEEEEEC CC >sa_dssp EDEEEDEDCAEBCBDBDADEDBCDCADECBCDBCCDAEDCDCCDDBCDDDDEDDDDBACBDBCACDEDBCDEADCBECCDCBDDEBDDBBDDDCEEDDDE EE >ss_pred CCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEE EC >ss_conf 9643476749999999966453799999999999998525991699999727998889998871898999998709999999999999730796425674 29 >Consensus xxxxxxxMxixvxxxxxvkpgxxxefxxxxxxxxxxxxxepGxlxxxlxxxxxxpxxxxxxexwxsxxaxxxhxxsxxxxxxxxxxxxllxxxpxixxxx xx >c4dpoA_ NLYFQSXLAIRVVAKNQVKPEKVQEFXNLCKSLIEETLKEEGCIDYGVYQELENPEILTXLEEWKDEGSLDQHIRSDHFKEIFPLLSECLDKETEINIYR KK >UniRef50_C6CPI1(26-116:125) Antibiotic biosynthesis monooxygenase n=2 Tax=Gammaproteobacteria RepID=C6CPI1_DICZE E=5e-07 s/c=0.61 id=13% cov=90% --------PIVLINIFTVGSADEAGFLDAFTAAAGILTKQPGYISTQLHRAIGDSPIFLNYVEWESTETLRDAFSRPEFMAKVSAYPPSVSATP--HLFQ K- >UniRef50_B7GBP9(63-154:282) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GBP9_PHATR E=0.0003 s/c=0.50 id=8% cov=90% --------PLTIFIRHNIVPGKEALFEEWVMEIGRLLRRFTGFLDAEIIRpNCCESHEYVSVVRFDTYDNLQVWMDSSERQLHIDKAYAFSEEPMKVSYH --- >UniRef50_Q4K793(3-96:121) Antibiotic biosynthesis monooxygenase domain protein n=3 Tax=Pseudomonas fluorescens RepID=Q4K793_PSEF5 E=1e-07 s/c=0.61 id=12% cov=93% -----THIPVSHMAFVRARAGRSKELGARLSSLIEPSRQACGCLHFALQHSQCDADLWLVSGFWSSQQAMTAYFNSPAMAIFAELVQDLVVNSLDFHTF- -- >UniRef50_A4V8P2(1-81:102) Putative uncharacterized protein n=2 Tax=Arthrobacter RepID=A4V8P2_9MICC E=4e-07 s/c=0.69 id=15% cov=80% --------MMTVVSTMQLQSDSEEEWDQLIRERFKSAHDRDGWISGQLLSPVAEPNTRVIIGTWRSQRDWEAWHEDPAFLSTRARLDEL----------- -- >UniRef50_B4B995(1-92:275) Antibiotic biosynthesis monooxygenase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B995_9CHRO E=1e-09 s/c=0.70 id=15% cov=90% --------MITCTTTLKAKHGQEANLEKLMLVLVDKVQsSEPDTKLFQFVRSVDQPGKYLFFEQYADQAALTFHQNTEYLPKIVQEMMNYLEQPPEILTF --- >UniRef50_A9EHU7(1-93:96) Putative uncharacterized protein n=3 Tax=Rhodobacteraceae RepID=A9EHU7_9RHOB E=1e-08 s/c=0.65 id=12% cov=92% -------MTIWVTLEMRVKDGAFDALSTFLEENLPNVRGFDGALSVTLYYDGQT-RAFLLHEEWLSREHHQAYLAFIEERGVMAALLGFMEGPPRVTYYE R- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * N 1 * * * * * * * * * * * 0 * * * * * * * * 1 0 * * * * * * 1000 0 0 L 2 * * * * * * * * * 0 * * * * * * * * * * 2 0 * * * * * * 1000 0 0 Y 3 * * * * * * * * * * * * * * * * * * * 0 3 0 * * * * * * 1000 0 0 F 4 * * * * 0 * * * * * * * * * * * * * * * 4 0 * * * * * * 1724 0 0 Q 5 * * 1957 1941 * * * * * * * * * 1053 * * * * * * 5 0 * * * * * * 2807 0 0 S 6 2912 * * * * * * * * * * * 3163 3077 * 939 3114 * * * 6 0 * * * * * * 4287 0 0 X 7 * * 2992 * * * * 2940 * * * * 2755 2842 * 1132 * * * * 7 0 * * * * * * 4092 0 0 L 8 * * * * * * * * 4924 5254 333 * * 4304 * 5159 3866 * * * 8 0 * * * * * * 7403 0 0 A 9 3046 * * * 4889 * 5010 * * * 1365 5895 2276 5789 5756 3806 4408 4397 * * 9 0 * * * * * * 8527 0 0 I 10 * * * 5927 4153 * * 1185 * 2620 4953 * * * * * 5895 2099 * 4557 10 23 5972 * 1000 1000 * * 8715 1000 0 R 11 3427 6039 * * * 5331 3190 3287 4713 4030 5260 5249 * * 4035 5166 2022 2855 * 5063 11 22 * 6042 * * * * 8785 0 0 V 12 * 6406 * 4738 5436 * * 1856 6322 2900 6104 * * * 4313 * 5312 1360 * 5305 12 0 * * * * 0 * 8962 0 1000 V 13 4170 * * 5366 4841 5294 5402 2244 * 2563 4097 5605 * 6166 6397 5626 3150 2196 * * 13 43 * 5096 * * * * 9026 0 0 A 14 1917 6516 * * 5346 3843 * 3007 * 3575 5451 3694 * * 6130 4030 4412 2328 * * 14 0 * * * * 581 1593 9008 0 2380 K 15 * * 6764 3361 4073 * 4438 3606 2365 * 5744 6735 * 3293 3193 4209 2801 5063 * 4481 15 0 * * * * * 0 9143 0 1000 N 16 5900 6487 * 6508 2344 5606 4915 3196 * 1994 4049 7129 6377 5752 4271 6500 6213 3306 6441 3985 16 0 * * * * 0 * 9168 0 1000 Q 17 * * 4485 3961 5629 6593 4649 5006 3135 * 6684 4960 4629 3398 2784 3849 2582 4236 * 3966 17 0 * * * * * * 9198 0 0 V 18 2517 6691 * * 4769 6990 6425 2356 * 3369 * * 3921 * * 6534 4316 1555 * * 18 28 6714 6692 1000 1000 * * 9222 1000 0 K 19 4329 * 5799 4676 * 6385 3912 5197 1515 4291 * 6657 4032 3030 3550 5688 4443 4562 * * 19 56 5109 6752 1017 983 0 * 9213 2348 1000 P 20 4048 * 3361 2955 * * 6840 6823 6456 6745 6703 4915 1012 * 6565 3249 6633 6596 * * 20 0 * * * * 0 * 9243 0 1000 E 21 5080 * 3415 1973 * 823 * * * * * * * 5829 * 5104 6642 * * * 21 16 6542 * 0 * * * 9243 1000 0 K 22 5127 4148 5045 4433 5564 5011 3293 * 1735 5071 4227 4732 * 3971 3241 5086 5221 * 6709 5180 22 0 * * * * * * 9243 0 0 V 23 3177 * 6838 2091 4766 5112 5206 4171 6690 3712 6742 5078 5681 4704 3045 4852 4286 3354 * 6630 23 0 * * * * * * 9267 0 0 Q 24 2433 * 2311 1887 * 5888 5889 * 4568 * * 3814 5697 3840 6619 4482 4267 * * * 24 0 * * * * * * 9267 0 0 E 25 2928 * 2886 1466 * 5233 5845 6634 4528 4406 * 5156 * 3317 3765 6697 6041 * * * 25 0 * * * * * * 9272 0 0 F 26 3878 * * * 1284 * * 4743 * 2515 6471 * * * * 6588 * 2590 5654 3303 26 0 * * * * * * 9272 0 0 X 27 3159 6495 5640 2795 4807 5341 * 3252 3214 2719 5746 6745 * 5095 3273 5687 * 3511 6670 6619 27 0 * * * * * * 9283 0 0 N 28 2198 * 2691 2506 * 6322 6827 6613 3685 4999 * 4263 6565 3522 3557 4154 5657 * * * 28 0 * * * * * * 9272 0 0 L 29 2061 6710 5058 5685 4493 * 6635 3244 4708 2243 * 5790 * 5248 3956 * 4678 3264 4981 6949 29 27 5748 * 0 * * * 9272 1593 0 C 30 3437 5269 * * 2309 6471 * 3654 * 1759 3680 6009 * * * 5595 6631 3774 4719 4101 30 0 * * * * * * 9272 0 0 K 31 3434 6688 5091 3730 6651 4738 4757 6903 3017 3165 5510 4309 6674 3700 2834 4020 4699 4135 * 6796 31 16 6547 * 0 * * * 9272 1000 0 S 32 3519 * 3300 2232 * 5838 5889 * 2989 * 6695 3583 6773 2768 4454 4382 4171 4654 * * 32 24 5919 * 614 1529 * * 9272 1739 0 L 33 2854 * * 6751 4151 4895 4202 3619 * 2109 4048 6187 * 6031 4072 4566 4154 2872 * 6496 33 12 6877 * 1585 585 * * 9258 1000 0 I 34 2769 * 5663 6618 * 6534 5795 3477 4739 2562 4147 4959 6611 4715 4561 3706 3775 2702 * 6027 34 13 6834 * 0 * * * 9258 1000 0 E 35 3247 * 3416 2144 * 3534 5039 6584 3795 5856 6691 5339 3938 3214 3719 4106 * 5897 * * 35 38 5254 * 362 2172 * * 9258 2365 0 E 36 2433 * 4475 3603 5759 4683 5245 5012 2896 3583 5735 6920 4418 4239 4560 4668 4571 3884 6560 5255 36 15 6639 * 0 * * * 9258 1000 0 T 37 3021 5209 * * 6427 * * 3817 * 2800 4104 * * * * 2545 2485 2422 * 5115 37 76 4545 6834 0 * * * 9258 2975 0 L 38 4231 6496 4676 4815 5284 6716 3754 6798 3311 3601 5776 4763 * 4208 1506 4260 5637 5260 * * 38 53 5298 6564 0 * * 0 9248 2258 1000 K 39 2600 * 4027 3891 * 4161 4967 6843 2892 4852 * 3370 7151 3204 5008 2986 4526 5188 * * 39 125 3738 6918 0 * 1017 983 9233 4376 1738 E 40 3949 * 3977 1479 3558 6468 4115 6646 5849 6078 5251 5854 * 3168 5073 5240 4353 5041 6777 5819 40 0 * * * * 1000 1000 9235 0 1641 E 41 3728 * 3168 3206 6780 6091 * 6463 3712 * * 5057 1105 6307 6734 4903 4537 * * * 41 12 6964 * 0 * 0 * 9242 1000 1000 G 42 5249 * 4008 4453 * 413 * * 4913 * * * 5201 * 5516 * 4949 * * * 42 0 * * * * * * 9257 0 0 C 43 5132 1823 6646 * 2617 5072 5779 5304 * 5451 5210 3272 * 6032 * * 3280 3597 6574 3685 43 15 6568 * 2807 222 * * 9257 1000 0 I 44 5980 6746 7003 4702 5603 5392 6758 2572 5939 1189 * 6705 6959 4819 4511 * 5723 2879 * * 44 14 * 6743 * * * * 9257 0 0 D 45 4465 6484 3783 3697 4740 3138 4136 4094 4708 4030 * 7482 * 5063 3211 2552 4491 5093 6013 5347 45 13 * 6783 * * * 0 9248 0 1000 Y 46 2930 5797 6748 * 2603 4128 4090 4363 * 4272 6828 * * 6721 4799 6539 5573 3759 4383 1984 46 16 * 6472 * * * 0 9233 0 1738 G 47 3881 * 3369 2662 3721 5957 4581 5792 6030 4594 5787 5303 * 3123 4564 4264 4028 4370 * 3229 47 10 7213 * 1000 1000 614 1528 9208 1000 2379 V 48 3679 4703 * 6022 3821 * * 3153 * 1473 5151 * * * 6161 7094 4739 2853 4397 4263 48 0 * * * * 0 * 9232 0 1000 Y 49 4410 4669 5842 * 3446 5247 2999 4643 * 2532 3848 5788 * 5101 * 3506 5553 4023 * 2712 49 22 6053 * 1338 727 * * 9257 1071 0 Q 50 5257 * * 3824 5190 6808 5787 6486 3573 4382 * 6654 5154 1823 2062 5656 4187 4171 6032 * 50 45 5646 6504 546 1666 * * 9257 1687 0 E 51 3795 5255 1877 3607 * 6561 5243 4540 5256 4889 6862 3814 3772 4716 4622 2887 6464 5083 * * 51 11 * 7096 * * 0 * 9243 0 1000 L 52 4158 5600 3998 3318 5275 4350 6550 3643 4348 3275 5795 5702 3093 4821 5613 4435 4194 3173 * 5602 52 14 6716 * 1000 1000 * 0 9260 1000 1000 E 53 4733 4778 2381 2365 5702 3314 5795 6492 4177 5814 * 5152 4247 4852 4955 3381 3968 * 6572 * 53 37 7721 5622 0 * 0 * 9267 1000 1000 N 54 4273 6544 1750 2541 6636 5369 4306 6826 5937 6576 * 3384 * 4789 4628 3631 3853 5284 * * 54 40 6773 5802 2000 415 0 * 9236 1000 1772 P 55 4230 * 3456 2666 * 4128 * * 4538 7415 * * 1218 5379 5594 3779 4776 6968 * * 55 43 5519 7106 3421 141 984 1016 9246 1811 1848 E 56 5842 6697 2554 4894 * 2579 4423 * 4660 5014 * 2256 6461 4174 3867 4782 3437 6463 * * 56 13 6854 * 1000 1000 0 * 9254 1000 1706 I 57 5754 7012 5970 2463 6038 5329 3960 4424 3284 4845 * 7093 * 4064 2387 4524 3228 4081 * 5619 57 27 6646 6842 1000 1000 * * 9263 1000 0 L 58 6021 6565 * * 1704 6316 * 3086 * 2873 6896 7448 6652 6586 5076 6502 * 3884 4424 2246 58 0 * * * * 0 * 9254 0 1000 T 59 4348 6594 * 5622 4450 4558 5230 3478 5775 2331 3853 6610 * * 4379 * 3681 2458 5688 3446 59 36 6573 6130 1000 1000 * * 9263 1000 0 X 60 4498 6016 * * 3079 6545 * 2641 * 2290 5202 4704 * 6675 * 4004 4544 2220 5014 5619 60 0 * * * * 0 * 9272 0 1745 L 61 5728 6761 6675 * 3312 * 6004 2495 * 2816 5845 6650 * 6797 6610 4509 4239 2496 5602 2434 61 0 * * * * * * 9263 0 0 E 62 4176 * 4181 1031 6771 4859 6604 5793 6022 5368 6629 * * 4755 5770 3606 3661 4009 * * 62 0 * * * * * * 9263 0 0 E 63 4510 7057 5148 3386 5687 5830 4108 3965 3549 3733 5858 4665 6788 3600 2868 5279 4084 3197 * 5254 63 0 * * * * * * 9263 0 0 W 64 * * * * 2623 * * * * 6022 * * * * * * * * 692 2299 64 0 * * * * * * 9263 0 0 K 65 2958 * 3766 1934 * 6944 4779 7429 4454 6487 * 7454 5889 3355 3270 3932 3692 4009 * * 65 0 * * * * * * 9263 0 0 D 66 * * 1840 5768 * 7135 6505 * 6574 * * 2456 * 5647 6557 1654 2804 * * * 66 22 6068 * 0 * * * 9263 1419 0 E 67 3787 * 4351 1900 6573 * 6750 5764 4426 3314 4843 5647 4113 3201 3837 5417 4243 4984 6022 6545 67 28 5726 * 958 1044 * * 9263 1802 0 G 68 1936 * 2488 1635 * 4412 5709 * 6573 6725 * 5708 6793 4894 5844 5105 5735 5302 * * 68 0 * * * * * * 9263 0 0 S 69 1381 * 2358 5170 * 4920 4492 * 6498 * 6910 4791 6761 4292 6760 3628 4091 4287 * * 69 13 6766 * 0 * * * 9263 1000 0 L 70 6534 * * * 2047 6692 4019 6281 6735 1844 4535 6706 * 4758 4232 6812 * 4388 3841 3243 70 16 6527 * 0 * * * 9252 1000 0 D 71 3324 * 2770 2486 * 5631 5120 * 3925 5125 6591 4753 * 2617 3414 5608 4007 6732 6024 5653 71 11 7026 * 0 * * * 9252 1000 0 Q 72 1630 * 4231 3160 5831 5237 * 6755 4520 * 5251 4173 * 4730 3440 4778 3815 4059 * 4803 72 40 5176 * 0 * * * 9252 2278 0 H 73 5090 * 6654 * 3381 * 866 * * * 6498 * * 4884 * 5531 * 6847 3056 3050 73 12 * 6862 * * * * 9252 0 0 I 74 5306 6643 6521 4355 3245 5416 3715 4291 5192 2066 3668 6768 6608 4549 3640 * 4992 3387 * 4850 74 13 6779 * 2000 415 0 * 9245 1000 1000 R 75 2133 6941 4169 3535 * 4688 5033 * 3506 6643 * 2712 * 3123 3584 4143 4719 6746 * * 75 12 6875 * 2000 415 * * 9252 1000 0 S 76 4256 * 4664 5998 * 4074 5788 5877 5153 5111 5390 4109 * 4827 4183 1340 2980 * 4409 * 76 14 6654 * 0 * * * 9252 1000 0 D 77 4018 * 2847 3209 * 5462 * 6601 4354 6676 * 5514 1308 6776 3939 4214 4741 6941 * * 77 12 * 6944 * * * * 9252 0 0 H 78 2651 * 3900 2884 5726 6708 2464 5335 6689 4444 6043 6654 4847 5230 6541 5779 4909 5625 6454 2575 78 27 6674 6886 3000 193 * 0 9246 1000 1000 F 79 3302 6879 5665 5787 1983 * 3925 5232 * 3867 4071 * * 6837 3560 4931 4596 3723 5604 3121 79 0 * * * * 0 * 9245 0 1826 K 80 3233 * 5053 4649 6976 6799 5064 4693 2147 5887 4949 5779 5846 2618 2945 5584 3424 5587 * * 80 0 * * * * * * 9252 0 0 E 81 2330 * 3493 2210 * 3830 * * 3051 6551 6498 6803 5326 3679 3571 5603 4155 6554 * * 81 0 * * * * * * 9252 0 0 I 82 4267 6716 5674 5980 2143 4434 5092 3849 6458 2605 3817 * 6467 6391 * 6584 4035 4771 3682 3722 82 23 * 5988 * * * * 9238 0 0 F 83 4825 * 5104 6663 3761 3483 3891 3942 5547 2802 3432 5478 5626 4981 4493 4739 5359 3103 4738 4711 83 0 * * * * 962 1039 9245 0 1806 P 84 2268 * 2974 2338 * 3841 * * 3515 5669 * 5675 5211 3825 4991 3384 4436 * * * 84 0 * * * * * 0 9242 0 1000 L 85 2503 * 6899 2706 5402 5195 6617 5259 2986 3820 * 4709 6692 3757 3765 5178 4396 4811 * 3806 85 0 * * * * 0 * 9242 0 1000 L 86 3334 * * 6510 4425 4053 6678 2694 * 1928 3604 5449 * 6928 5955 5197 4233 3113 5694 6468 86 42 6620 5744 1000 1000 * * 9223 1000 0 S 87 3007 * 3547 4660 * 3352 6403 4539 2756 6572 4713 5085 3759 3999 3363 4694 6624 4127 6608 5520 87 32 5509 * 1320 738 0 * 9210 1818 1608 E 88 3825 * 2742 2582 6533 3439 5544 * 3504 * * 5280 2785 5183 5136 3838 3270 * * * 88 0 * * * * * * 9223 0 0 C 89 5114 3972 * * 3586 * 5603 3565 6742 1518 3271 5608 * * 5208 5161 6545 4668 5364 3222 89 0 * * * * * * 9197 0 0 L 90 5102 5663 * 5638 3146 4703 * 3259 * 1359 4398 6674 6431 * 6605 4594 4720 3419 6645 5408 90 0 * * * * * * 9198 0 0 D 91 2167 * 2821 2552 6525 * * 6791 5529 6595 6712 5756 5427 5644 4610 3324 3282 3344 * * 91 0 * * * * * * 9154 0 0 K 92 3341 * 5115 2379 6620 1909 * 5889 3989 5675 * 5945 6260 5098 3952 3110 4546 5473 * * 92 16 * 6465 * * * * 9096 0 0 E 93 3363 * 3213 3086 6210 5676 6590 * 3696 * 6389 6317 1419 4968 4438 4905 5341 5515 * * 93 35 6290 6498 0 * 0 * 9006 1000 1000 T 94 4182 * * 5239 * * * 4868 5427 3576 3860 5290 1070 5043 3752 6474 4217 5390 * 6288 94 21 * 6113 * * * 0 8962 0 1000 E 95 6200 * 2703 2248 6174 6236 5341 5161 3175 5311 * 4779 * 3757 4163 4346 3821 3054 * * 95 0 * * * * * 0 8781 0 1811 I 96 5153 * * * 4582 * 6290 1255 6202 3654 4654 5652 5856 * 5877 * 6406 1877 * 5185 96 0 * * * * 969 1032 8690 0 1811 N 97 4386 * 4200 3021 * 6211 4440 4949 2731 5053 * 3812 * 5065 3320 3292 2583 5937 * 6008 97 24 5927 * 2000 415 0 * 8622 1000 1000 I 98 4868 * * 6052 2649 * 4924 2996 4930 2607 * * * * 4983 4945 3240 2440 6053 3905 98 0 * * * * * * 8590 0 0 Y 99 * 5780 * 5721 1916 * 4733 5805 * 3826 4157 * * * * * * * 2956 1370 99 0 * * * * * * 8417 0 0 R 100 * * * 5188 * * * * 3403 * * 4041 5066 2722 1651 4196 1927 * * * 100 0 * * * * * * 7575 0 0 K 101 * * * 2061 * * * 4077 1280 * * * * 3073 2551 * * * * * 101 0 * * * * * * 6184 0 0 K 102 * * * * * * * * 991 * * * * * 1009 * * * * * 102 0 * * 0 * * * 3714 0 0 //