HHsearch 1.5 NAME c3ziaT_ FAM FILE c3ziaT_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3ziaT_.a3m DATE Sat Feb 16 08:35:07 2013 LENG 36 match states, 36 columns in multiple alignment FILT 2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.2 EVD 0.5269 4.2977 SEQ >ss_dssp CTTTTTSCCCTTSCCHHHHHHHHHHHHHHHHHHHHC >sa_dssp EEDDEDEEDDEEEDDEEAEECCEEEEEDDEDEEEEE >ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 987767877788524678776433356775445039 >Consensus segsxgsprgxgxxdsfvxrxraxedxfirqxekeq >c3ziaT_ SEGSTGTPRGSGSEDSFVKRARATEDFFVRQREKEQ >UniRef50_C5E267(33-68:98) KLTH0H02530p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5E267_LACTC E=2e-08 s/c=1.66 id=68% cov=103% SEGSVGSPRGEGADDSFVRRERAQEDYFIRQHEKEQ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 0 * * * * 1 0 * * * * * * 1236 0 0 E 2 * * * 0 * * * * * * * * * * * * * * * * 2 0 * * * * * * 1236 0 0 G 3 * * * * * 0 * * * * * * * * * * * * * * 3 0 * * * * * * 1236 0 0 S 4 * * * * * * * * * * * * * * * 0 * * * * 4 0 * * * * * * 1236 0 0 T 5 * * * * * * * * * * * * * * * * 1000 1000 * * 5 0 * * * * * * 1236 0 0 G 6 * * * * * 0 * * * * * * * * * * * * * * 6 0 * * * * * * 1236 0 0 T 7 * * * * * * * * * * * * * * * 1000 1000 * * * 7 0 * * * * * * 1236 0 0 P 8 * * * * * * * * * * * * 0 * * * * * * * 8 0 * * * * * * 1236 0 0 R 9 * * * * * * * * * * * * * * 0 * * * * * 9 0 * * * * * * 1236 0 0 G 10 * * * * * 0 * * * * * * * * * * * * * * 10 0 * * * * * * 1236 0 0 S 11 * * * 1000 * * * * * * * * * * * 1000 * * * * 11 0 * * * * * * 1236 0 0 G 12 * * * * * 0 * * * * * * * * * * * * * * 12 0 * * * * * * 1236 0 0 S 13 1000 * * * * * * * * * * * * * * 1000 * * * * 13 0 * * * * * * 1236 0 0 E 14 * * 1000 1000 * * * * * * * * * * * * * * * * 14 0 * * * * * * 1236 0 0 D 15 * * 0 * * * * * * * * * * * * * * * * * 15 0 * * * * * * 1236 0 0 S 16 * * * * * * * * * * * * * * * 0 * * * * 16 0 * * * * * * 1236 0 0 F 17 * * * * 0 * * * * * * * * * * * * * * * 17 0 * * * * * * 1236 0 0 V 18 * * * * * * * * * * * * * * * * * 0 * * 18 0 * * * * * * 1236 0 0 K 19 * * * * * * * * 1000 * * * * * 1000 * * * * * 19 0 * * * * * * 1236 0 0 R 20 * * * * * * * * * * * * * * 0 * * * * * 20 0 * * * * * * 1236 0 0 A 21 1000 * * 1000 * * * * * * * * * * * * * * * * 21 0 * * * * * * 1236 0 0 R 22 * * * * * * * * * * * * * * 0 * * * * * 22 0 * * * * * * 1236 0 0 A 23 0 * * * * * * * * * * * * * * * * * * * 23 0 * * * * * * 1236 0 0 T 24 * * * * * * * * * * * * * 1000 * * 1000 * * * 24 0 * * * * * * 1236 0 0 E 25 * * * 0 * * * * * * * * * * * * * * * * 25 0 * * * * * * 1236 0 0 D 26 * * 0 * * * * * * * * * * * * * * * * * 26 0 * * * * * * 1236 0 0 F 27 * * * * 1000 * * * * * * * * * * * * * * 1000 27 0 * * * * * * 1236 0 0 F 28 * * * * 0 * * * * * * * * * * * * * * * 28 0 * * * * * * 1236 0 0 V 29 * * * * * * * 1000 * * * * * * * * * 1000 * * 29 0 * * * * * * 1236 0 0 R 30 * * * * * * * * * * * * * * 0 * * * * * 30 0 * * * * * * 1236 0 0 Q 31 * * * * * * * * * * * * * 0 * * * * * * 31 0 * * * * * * 1236 0 0 R 32 * * * * * * 1000 * * * * * * * 1000 * * * * * 32 0 * * * * * * 1236 0 0 E 33 * * * 0 * * * * * * * * * * * * * * * * 33 0 * * * * * * 1236 0 0 K 34 * * * * * * * * 0 * * * * * * * * * * * 34 0 * * * * * * 1236 0 0 E 35 * * * 0 * * * * * * * * * * * * * * * * 35 0 * * * * * * 1236 0 0 Q 36 * * * * * * * * * * * * * 0 * * * * * * 36 0 * * 0 * * * 1236 0 0 //