HHsearch 1.5 NAME c3zeyD_ FAM FILE c3zeyD_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3zeyD_.a3m DATE Sat Feb 16 08:36:37 2013 LENG 103 match states, 103 columns in multiple alignment FILT 45 out of 49 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.7 EVD 0.4596 2.2408 SEQ >ss_dssp CCCSCCHHHHHHHHHHHHHHSEEEEECCCCCSSCSSCSBTTBSSCHHHHHHHHHHHHHTSSEEEEESSSEEEEEECHHHHHHHHHHTTCCSSCCTTTCCS SCC >sa_dssp EEDEDDEEBCCDBADDABDDACBCBDDCECDEEEEECCAEDBECCCECACCBBEBBDEEDCBDCDEDEECBDBCBDEEACDDACECBEEEEEBDBDEDEE EEE >ss_pred CCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECHHHHHHHHHHHCCCHHHCCCCCCC CCC >ss_conf 9631455679999999973154998416777858767754478842488899964101677754231032568882889999999819995446632023 589 >Consensus xxxxipkxxrxaIYxxLfxeGVlvxkkdxxxxxhxxxxxxxxxvpNLxVxkxmxSLxSrgxVkexfxWxhxYxxLtxeGieyLRxyLxLpxxvvPaTxkk xxx >c3zeyD_ MTTYVPKSSRDDVYRFFFTEGVVSCKKDPLGTWKGTLGGKTFKLPTLQVMQLMRSLKSRGLIKEQFAWRHFYWTLNDEGINYMRKYLYLGADAVPNTHKV DHK >UniRef50_Q24F70(2-96:162) Plectin/S10 domain containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q24F70_TETTH E=6e-07 s/c=0.58 id=36% cov=88% ------KATKIRIYKQLLQDGVFVLKKDFEGHHEET------GVPNLHCYILVRSLKDRGFLEEIFNWGFTYYYLNKEGCEYLKTKLGISADnVIPKTFK ASN- >UniRef50_C5JD57(81-177:243) Ribosomal protein S10A n=15 Tax=Dikarya RepID=C5JD57_AJEDS E=1e-34 s/c=1.52 id=38% cov=95% -TMLIPKADRKKIHEYIFREGVLVAKKDFNLPKHGDIDTK-----NLYVIKACQSLTSRGYLKTRFSWQYYYYTLTPEGLDYLREWLHLPAEIVPATHIK QQR >UniRef50_B0E5I8(1-93:127) 40S ribosomal protein S10, putative n=2 Tax=Entamoeba RepID=B0E5I8_ENTDI E=7e-23 s/c=1.16 id=40% cov=89% ----IATKDIIAIYKQLFNDGCIVCHKDFVCLH------PVFGIPNLQVFMLMKGLATKKCVKETCNWRCLYWTLNDEGIAYLRQKLALPEDAVPSTLKQ T-- >UniRef50_Q3LVY9(1-82:84) Ribosomal protein S10 n=1 Tax=Bigelowiella natans RepID=Q3LVY9_BIGNA E=7e-07 s/c=0.67 id=23% cov=79% ----VSKFKLIKIYEKILNDGIIIIPKNFNRTYQFCNSFYA-----FHLKKVLISLHSRKFMNEILLGSNYYWTLTKKGERFLRNYFNL----------- --- >UniRef50_Q8SS17(30-79:96) 40S RIBOSOMAL PROTEIN S10 n=1 Tax=Encephalitozoon cuniculi RepID=Q8SS17_ENCCU E=1e-05 s/c=1.02 id=25% cov=50% -------------------------------------NHRDLEIPNLHLKIFMKTMISYGYVQRIHVWRHSYFLLTPLGESRLREEL------------- --- >UniRef50_B4K083(1-95:278) GH17537 n=7 Tax=Drosophila RepID=B4K083_DROGR E=3e-30 s/c=1.39 id=39% cov=91% ---FMKKADRIAIYQVLFHSGVMFAERSPQMMH---TDKELKHLTNLQVTKTMKSLKSSGYVTEQTAWRHHYWCLNNEGIEFLRAYLHQPAEAMPITLQ- --- >UniRef50_A2G675(1-94:141) Plectin/S10 domain containing protein n=4 Tax=Trichomonas vaginalis RepID=A2G675_TRIVA E=1e-24 s/c=1.20 id=32% cov=88% ---YMPTAIRRRILRYLFENGVLCVSDIQSGTH------EELDCLNIYPYQIGRAFVTKGFCIKTYAWSHAYYTLTDKGIEYLRNYFGLPANAAPATLR- --- >UniRef50_C6LNQ2(4-104:136) Ribosomal protein S10B n=2 Tax=Giardia intestinalis RepID=C6LNQ2_GIALA E=2e-22 s/c=1.05 id=29% cov=94% ----IPKAVYKAVYAHLYENASLALKEYWRVGNVPGItyideNGKPCNPTYIHVNCIMQSLESRGVVKDTFAWRHHYYLLTEKGEQFIRRELDLADDVLP TPFSK--- >UniRef50_Q98RW8(1-90:93) 40S ribosomal protein S10B n=1 Tax=Guillardia theta RepID=Q98RW8_GUITH E=3e-19 s/c=1.07 id=33% cov=86% ----IEKRYRRKIYEELFKEGVYIVKDERF----------NYNCEKFIALKILKGLLSKGFVNEIYSWKYHYFVLNQEGLEYVRKLLNLPNGVVPNTHKI PN- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * 1374 703 * * * * * * * * * 1 0 * * * * * * 1685 0 0 T 2 2217 * * * * * * * * * * * * * * 2294 1388 * * 2330 2 0 * * * * * * 2081 0 0 T 3 * * * * * * * * * * 3014 * * * * 1126 1259 * * * 3 0 * * * * * * 2332 0 0 Y 4 * * * * 1670 * * 3926 * 2327 * * * * 3542 * * * * 1578 4 0 * * * * * * 2936 0 0 V 5 * * * * * * * 883 * 5009 2265 * * * * * * 2192 * * 5 0 * * * * * * 3748 0 0 P 6 4786 * * 4529 * * * * 3703 * * * 653 * 5258 2459 * * * * 6 0 * * * * * * 3748 0 0 K 7 * * * 4881 * * * * 572 3735 * * * * 3574 5072 3254 * * * 7 0 * * * * * * 3803 0 0 S 8 1667 * 3713 2868 4181 * * * 2984 * * * 5519 3800 3660 4024 5795 4707 * * 8 0 * * * * * * 3803 0 0 S 9 * * 2458 4996 * * 5866 4419 4181 * * 1634 * 4514 * 3455 3428 3724 * 4575 9 0 * * * * * * 3803 0 0 R 10 * * * * * * * 4864 3177 2804 * * 4996 5286 788 * * * * 3724 10 0 * * * * * * 3803 0 0 D 11 * * 3532 4996 * * * 2353 2315 5398 * 3313 * * 1593 * * 5072 * * 11 0 * * * * * * 3803 0 0 D 12 1143 * 5001 3857 * * * 5519 2646 5391 5323 5048 * * 3530 4029 5293 6274 * * 12 0 * * * * * * 3803 0 0 V 13 * * * * * * * 470 * * * * * * * 4996 * 2019 * * 13 0 * * * * * * 3803 0 0 Y 14 * 6036 * * 5103 * 3495 * * 3867 5114 * * * * 4930 * * * 441 14 0 * * * * * * 3849 0 0 R 15 3766 * * 1206 * * * * 2851 * 5025 * * 3620 2721 5354 3918 * * * 15 0 * * * * * * 3849 0 0 F 16 3899 * * 4686 3822 * 2576 * 3602 6484 * 4926 * 3270 * * * 3557 * 1554 16 0 * * * * * * 3842 0 0 F 17 * * * * 3822 * * 3896 * 350 * * * 5095 * * * 4376 * * 17 0 * * * * * * 3842 0 0 F 18 5095 * * * 572 * * 4253 * 2990 * * * * * * * * * 3064 18 30 5598 * 1585 585 * * 3842 1000 0 T 19 5598 * * 3080 * * 4767 * 1647 4886 * 3182 * 2890 2864 5785 3822 * * * 19 0 * * * * * * 3842 0 0 E 20 * * 1925 820 * * * * * * * 3080 * 6033 * 4767 * * * * 20 0 * * * * * * 3842 0 0 G 21 3783 * * * * 109 * * * * * * * * * * * * * * 21 0 * * * * * * 3842 0 0 V 22 5368 4917 * * * * * 4224 * 4966 * * * * * 3783 * 350 * * 22 0 * * * * * * 3842 0 0 V 23 * 6042 * * 4697 * * 1876 * 1457 2550 * * * * * * 3320 * 4686 23 0 * * * * * * 3842 0 0 S 24 3307 4455 * * 4215 * * 3179 * * * * * * * 5105 5114 778 5785 5055 24 0 * * * * * * 3842 0 0 C 25 1121 3132 * * * * * 3518 * 3169 * * * * * * * 2136 * * 25 47 * 4966 * * * * 3842 0 0 K 26 5989 * * 3533 * * 4071 * 666 * * * 3676 5755 3945 4432 * * * * 26 0 * * * * * 0 3797 0 1000 K 27 * * 3507 3742 * * * * 518 * * 3298 * * 4740 * * * * * 27 0 * * * * * 0 3797 0 1000 D 28 * * 662 4585 * * * 4432 5303 * * 3338 * * 5738 4007 * * * 3742 28 190 4753 3533 0 * * 0 3797 1000 1000 P 29 5292 * * 5350 1766 5621 * * 5131 4251 4713 * 2708 3898 2831 5153 * 6338 4650 3729 29 38 * 5247 * * * 0 3713 0 1969 L 30 4671 * 4941 4034 4521 * 4702 * 3727 4920 4945 2002 * 4582 2499 4349 5197 3331 * * 30 64 * 4521 * * 2111 380 3701 0 2152 G 31 4594 4731 5189 * 5526 2322 * 4350 4682 1965 4210 * 4088 4358 3996 5736 * 3562 * * 31 10 7137 * 0 * * 0 3687 1000 2250 T 32 3676 * 5526 5605 * 4644 4556 * 3315 4731 4593 4631 1733 3824 * * 2281 * * * 32 0 * * * * 755 1295 3687 0 2250 W 33 * * * 4810 * * 2059 * 2072 4004 * 4715 5695 5796 3437 4321 4309 4737 4041 4111 33 215 * 2851 * * 924 1081 3768 0 1424 K 34 * * * 4435 5395 * 928 * 3365 * * * 3862 3918 3383 * 4876 4555 * * 34 139 * 3449 * * * 0 3594 0 2410 G 35 4019 * * 3301 3867 2826 * 5022 4584 * * 5121 1124 * 4814 4983 * * * * 35 0 * * * * * 0 3566 0 2713 T 36 5148 3261 4112 1750 4570 4476 3842 4483 * 5574 * * * 3811 * 3414 3001 * * * 36 73 * 4346 * * 2936 202 3608 0 2713 L 37 * * * * 4586 * * 1739 * 1994 4635 3840 5138 * * * 2877 3402 * 4695 37 398 3159 2954 2085 388 2333 319 3562 1462 2702 G 38 5993 * 2909 2983 * 2376 2834 * 5158 4265 * 2476 4198 * * 3689 * * * * 38 351 * 2212 * * * 0 3663 0 2863 G 39 4082 4229 5101 3358 3335 2025 2767 * 4108 * * * 3851 5245 * * 3114 * * * 39 111 * 3756 * * 2035 403 3555 0 3012 K 40 * * * 1826 * * 4767 * 1808 * * 5020 3413 5359 3019 4662 * * * 3580 40 190 * 3018 * * 2667 247 3761 0 2793 T 41 3732 * 4415 2165 * * * 5049 * 3247 * 4126 2809 4540 * * 2907 2806 * * 41 113 * 3732 * * * 0 3717 0 2746 F 42 4957 3155 * * 2741 * * 3437 2546 2361 4454 * 3316 * * * 4700 * * 3985 42 0 * * * * 1144 869 3535 0 2919 K 43 * * 2331 3424 * 2342 4550 * 4729 * * 2023 * 4680 5797 5482 3251 * * * 43 0 * * * * 809 1220 3723 0 2490 L 44 5962 3411 * * * * * 2275 * 3833 5460 * 3670 * * * * 966 * * 44 0 * * * * * 0 3774 0 1827 P 45 5365 * * 3675 * * * * 3897 4307 * * 983 5597 4301 5307 2497 * * * 45 0 * * * * 627 1505 3774 0 1827 T 46 * 5123 * * * * * * 4670 * * 335 * * * 4891 5108 * * 3705 46 0 * * * * 0 * 3766 0 1000 L 47 * * * * 3512 * * 2379 * 474 * * * * * * * * * * 47 0 * * * * * * 3918 0 0 Q 48 * * 5502 4251 * * 1451 3870 * * * * * 1562 * * * * * 2714 48 0 * * * * * * 3918 0 0 V 49 4768 4710 * * * * * 5563 * 3617 * * 4499 * * * * 362 * * 49 0 * * * * * * 3918 0 0 M 50 * * * * 5039 * * 1589 3617 4089 2290 3814 * * * * 3971 4558 4941 3601 50 0 * * * * * * 3918 0 0 Q 51 * 3814 * * * * * 3862 1117 5416 2586 * * 3030 4206 * * 4939 * * 51 0 * * * * * * 3918 0 0 L 52 2112 * * * 4123 * * 2349 * 1989 * * * * * * 2688 3210 * * 52 0 * * * * * * 3918 0 0 M 53 * 4523 * * * 4499 * * * 1685 858 * * * * * 6455 4710 * * 53 0 * * * * * * 3918 0 0 R 54 5550 * * * * 4295 * 4295 1826 * * * * 1580 1942 * * * * * 54 0 * * * * * * 3918 0 0 S 55 4499 * * * * 3412 * * * * * * * * * 267 5032 * * * 55 0 * * * * * * 3918 0 0 L 56 * * * * 2680 * * * * 334 4311 * * * * * * * * * 56 0 * * * * * * 3918 0 0 K 57 4127 5657 5224 3599 * * 3909 3985 1580 4056 * * * 5813 4214 5499 3291 3420 * * 57 0 * * * * * * 3918 0 0 S 58 4375 * 3821 * * * * * * * * * * * * 343 3436 * * * 58 0 * * * * * * 3918 0 0 R 59 * * * * * * * * 1520 * * * * * 780 4806 * * * 4922 59 0 * * * * * * 3888 0 0 G 60 5660 * 5541 3960 * 640 * * 2721 * * 3753 * * * 5225 * * * * 60 0 * * * * * * 3888 0 0 L 61 * 5118 * * 1672 * * * * 2297 * * 5652 * * * * 3362 * 1570 61 0 * * * * * * 3866 0 0 I 62 4976 4495 * * * * * 4217 * 3864 4323 * * * * * * 412 * * 62 0 * * * * * * 3866 0 0 K 63 * * 3739 4099 * * * 4495 1244 * * 3265 * 4952 2995 * 3098 5532 * * 63 0 * * * * * * 3866 0 0 E 64 * * 3724 579 * * * * 4495 4940 * * * 5390 4952 * 3037 * * * 64 0 * * * * * * 3866 0 0 Q 65 * * * * * * 5532 2505 2900 * * * * 1911 4392 4855 1798 4940 * * 65 0 * * * * * * 3866 0 0 F 66 * 5118 * * 645 * 4952 * * 3840 * * * * * * 4763 * * 2376 66 0 * * * * * * 3866 0 0 A 67 1506 4855 * * * * * * * 4323 * 2272 * * * 2107 4593 3596 * * 67 0 * * * * * * 3866 0 0 W 68 * * * * * 4323 * * * * * * * * * * * * 74 * 68 0 * * * * * * 3866 0 0 R 69 * 5530 * * * 4181 * 5652 3447 * 4364 4976 * 1958 1397 3406 * * * * 69 0 * * * * * * 3866 0 0 H 70 * 5118 * * 4648 * 938 * * * * 4323 * * * * 4130 * 3528 2213 70 0 * * * * * * 3866 0 0 F 71 4495 5746 * * 3069 * 2385 * * 4311 * 4643 * 5629 * 4952 4648 * * 1173 71 0 * * * * * * 3866 0 0 Y 72 * * * * * * 4976 * * * * * * 5652 * * * * * 76 72 0 * * * * * * 3866 0 0 W 73 * * * * 2780 * * * * * * * * * * * * * 1127 1335 73 0 * * * * * * 3866 0 0 T 74 * 4763 * * 3052 * 5652 4191 * 2948 * * * * * * 1630 3200 * 2276 74 0 * * * * * * 3866 0 0 L 75 * * * * * * * * * 0 * * * * * * * * * * 75 0 * * * * * * 3866 0 0 N 76 * * * * * * * * 4277 * * 1857 * * * * 573 * * * 76 0 * * * * * * 3876 0 0 D 77 4913 * 1921 3158 * * * * 3451 * * 1579 3282 4730 * * 5376 * * * 77 0 * * * * * * 3876 0 0 E 78 * * 3809 630 * * * * 2548 4918 * 5499 * 5525 4857 * * * * * 78 0 * * * * * * 3876 0 0 G 79 * * * * * 0 * * * * * * * * * * * * * * 79 0 * * * * * * 3876 0 0 I 80 * 4627 * 2645 * * * 914 * 3687 * * * * * * * 2386 * * 80 0 * * * * * * 3876 0 0 N 81 3126 * 3789 1071 * * * 4982 4210 * * 3764 * 3722 4294 4918 * 5799 * * 81 0 * * * * * * 3876 0 0 Y 82 * * * 4870 1797 * 4274 * * * * * * * 4918 * * * * 754 82 0 * * * * * * 3876 0 0 M 83 * * * * * * * 3722 * 324 4204 * * * * * * 3819 * * 83 0 * * * * * * 3876 0 0 R 84 * * * * * * * * 4627 * * * * * 60 * * * * * 84 0 * * * * * * 3876 0 0 K 85 4753 6167 3594 1975 * * * * 3942 * * 2395 * 3182 3377 4626 3189 * * * 85 0 * * * * * * 3876 0 0 Y 86 * 4228 * 2954 4652 * * * 3283 4730 * * * * * * * 4557 3842 929 86 0 * * * * * * 3876 0 0 L 87 * * * * 3393 * * * * 144 * * * * * * * * * * 87 0 * * * * * * 3876 0 0 Y 88 5069 * 3325 * * 3054 1290 * * * * 2090 * 4151 * * * * * 4325 88 0 * * * * * * 3813 0 0 L 89 * * * * 4926 * * 2926 * 366 * * * 4700 * * * 5573 * * 89 0 * * * * * * 3813 0 0 G 90 3177 * * * * 5149 * * * * * * 390 * * 4002 * 4803 * * 90 0 * * * * * * 3678 0 0 A 91 1560 * 3629 2718 * * * * * 4865 * 4600 2206 * * 3194 5241 * * * 91 0 * * * * * * 3678 0 0 D 92 * * 1721 1508 * 3971 5908 * * * * 4296 * * * 3361 3105 * * * 92 65 4509 * 0 * * * 3678 1000 0 A 93 2528 * * * * * * 1658 * * 5522 * * * * * * 1035 * * 93 0 * * * * * * 3678 0 0 V 94 4296 * * * 2893 * * 2789 * 3274 3864 * * * * * * 1006 * * 94 0 * * * * * * 3678 0 0 P 95 * * * * * * * * * * * * 0 * * * * * * * 95 0 * * * * * * 3678 0 0 N 96 1118 * 5291 5558 * 5818 * 4629 4454 4715 5493 3015 * * * 3382 3926 5602 5473 * 96 0 * * * * * * 3654 0 0 T 97 * * * * * * * * * * * * 3926 * * 3851 209 * * * 97 0 * * * * * * 3654 0 0 H 98 * * * * 2714 * 1964 * * 1157 3836 * * 4967 * * * * * 4605 98 0 * * * * * * 3632 0 0 K 99 * * * * * * * 4157 915 * * * * 3035 4166 2976 3199 * * * 99 0 * * * * * * 3577 0 0 V 100 3174 * * * * * * 4038 812 * 4496 * 4352 4275 3892 * * 4423 * * 100 0 * * * * * * 3309 0 0 D 101 3761 * 3868 * * * 6449 * * * * * 3509 1389 * 2093 2815 * * * 101 0 * * * * * * 2973 0 0 H 102 3975 * 3191 * * 3285 2943 * * * * 1875 * 1931 * * * 4072 * * 102 0 * * * * * * 2681 0 0 K 103 * * * * * * * * 677 * * * * * 1417 * * * * * 103 0 * * 0 * * * 2268 0 0 //