HHsearch 1.5 NAME c3po0A_ FAM FILE c3po0A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3po0A_.a3m DATE Sat Apr 2 08:47:37 2011 LENG 89 match states, 89 columns in multiple alignment FILT 109 out of 497 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.4 EVD 0.4458 1.3111 SEQ >ss_dssp CEEEEEECHHHHHHHTCSEEEEECCTTCBHHHHHHHHHHHCGGGHHHHBCTTSCBCTTSEEEETTEECCTTSBCCTTCEEEEECCCSCC >sa_dssp DDBDACACDDBBECBECEDBEBEBDEEACABDAAEDABEDCEDADEDABBEEEECDEDBEBCCDEEEBECECEBDEEBDABADCDEEEE >ss_pred CEEEEEEHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEECCEECCHHCCCCCCCEEEEECCCCCC >ss_conf 95999970445765299469998599894999999998667125676301445555408999968037820065899899997887899 >Consensus gxixVxxfaxlrexxGxxexxvxxxxxxTvxxlxxxLxxxxpxxxxxlxxxxxxxxxxxxvxvNgxxxxxxxxlxxgDeVaixPpvsGG >c3po0A_ GSMEWKLFADLAEVAGSRTVRVDVDGDATVGDALDALVGAHPALESRVFGDDGELYDHINVLRNGEAAALGEATAAGDELALFPPVSGG >UniRef50_C1DI36(8-90:90) Molybdopterin biosythesis protein, MoaD n=1 Tax=Azotobacter vinelandii DJ RepID=C1DI36_AZOVD E=5e-05 s/c=0.59 id=21% cov=90% --------APFRKSV-EDLSRLEVGAGS-VSALLREVDTRYPGFNAQLHGPDGSVKKYIRIFVNGKDIkaldGMETALDTRDEVFIVSAMAGG >UniRef50_Q9Y8C2(3-91:91) Molybdopterin synthase sulfur carrier subunit n=4 Tax=Leotiomyceta RepID=MOC2A_EMENI E=8e-07 s/c=0.61 id=22% cov=98% -TFQIHYFASASTYTGRNTESLPAPLP--LSSLFDTLEAKYPGIKEKVLSSCSISLgdEYVDLVSDGEKSGNEGLLiQGGDEVAIIPPVSSG >UniRef50_C6A4Y0(3-94:96) Putative uncharacterized protein n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A4Y0_THESM E=5e-06 s/c=0.56 id=16% cov=99% --LTLTYGGPFYEKTKKHKEIIELDKNSiTVQELVKFLFEQYPELAQFFENNPEKIFEFSTIIVRGRvLIPQDLPrvhLSDGEEVFFLPVVHGG >UniRef50_A6VX23(4-84:84) ThiamineS protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VX23_MARMS E=7e-07 s/c=0.68 id=23% cov=91% --VRVVFFASLKESIGQSEYIAVLTLPLSIGELKQ-------QLANELDKGQVLLAKGIQSSIDFEFARDADIVPDSvNEVAFFPPVTGG >UniRef50_A1HP76(1-90:90) ThiamineS protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP76_9FIRM E=8e-06 s/c=0.57 id=23% cov=99% --MNIQFAGPLAKVLGHKRWVIRSGGQLTAEEVIVRLAHDFPQAEVFREVRRGKPPIPYMFMVikNGKsLLRPHDRLDDQDELEIIPPIMGG >UniRef50_A7IA81(2-92:92) MoaD family protein n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7IA81_METB6 E=1e-13 s/c=0.86 id=23% cov=99% -TIKVRFFARFRELLGTD-IIVTSQEGTHLLTVVKKIAEKSQDGYDAIFDAKGDFREFVIVMQNGRRVEtataASTPVTDGDEIAVFPPVAGG >UniRef50_A9WPX9(1-101:101) Putative molybdopterin cofactor synthesis protein n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WPX9_RENSM E=3e-06 s/c=0.52 id=24% cov=99% --MLIRYFAAARAAAGFEQETIEIADGVELAELCTLLARQHPTSASASVPALEVLLPRCSFLRNGMVLKLQAnqttqtalnaqtgsLLANTDVIDVLPPF AGG >UniRef50_A6DHY5(4-91:91) Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHY5_9BACT E=3e-08 s/c=0.68 id=16% cov=96% -----KLWGQLKQKAGKEFIHMESIEELNIQDIVLRICEMEPSLSEVLLKSSSSIHPSILIFVNDNQYEHDkqSPIKKSDPITFMSPIAGG # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 3978 0 0 S 2 3001 * * 4911 4489 * 3905 * * * * 3650 * 4917 * 1976 1626 * 4657 * 2 0 * * * * * * 5889 0 0 M 3 * * * * 4632 * * 1787 * 3668 1987 * * * * * * 1616 * 6301 3 0 * * * * * * 7130 0 0 E 4 * * 6313 3907 6268 * 6173 6447 1789 5328 * 3676 * 3236 3268 5270 1977 * * * 4 0 * * * * * * 7142 0 0 W 5 5342 * * * 5388 * * 1932 * 2990 * * * * * * * 856 6505 * 5 0 * * * * * * 7159 0 0 K 6 * * * 4598 6027 * 6053 * 1523 2726 * 5569 * 4305 1994 6398 4938 4600 * 5587 6 18 6349 * 1000 1000 * * 7187 1000 0 L 7 * 5493 * * 1570 * * 5610 * 1597 * * * * * * * 4433 * 2037 7 32 5503 * 1000 1000 * * 7261 1496 0 F 8 5375 * * * 748 6413 5570 * 6543 3620 4955 * 4278 * * 5555 5428 6567 5504 3400 8 0 * * * * * * 7261 0 0 A 9 1054 * * * * 1466 * * * 5270 * * * * 6178 3721 4613 * * * 9 0 * * * * * * 7267 0 0 D 10 3127 * 5695 6267 5335 4752 4710 4760 4063 4171 5728 4572 3346 3802 4057 3768 3259 4356 4348 4870 10 14 * 6684 * * * * 7267 0 0 L 11 2722 4941 * * 2510 * * 4089 * 1104 * * 6491 * * * * 3789 * 4923 11 0 * * * * * 0 7259 0 1000 A 12 2550 6268 * * * 5198 6211 * 2690 * * 6628 * 5632 1295 3350 5779 4449 * 5605 12 15 * 6608 * * * 0 7331 0 1000 E 13 6350 * 1906 1416 * * 6004 * 4006 5014 * 6596 6913 3924 5291 4500 3942 * 6801 6769 13 16 * 6491 * * 915 1091 7336 0 1730 V 14 2905 * 5098 5653 4393 * 6034 3609 3266 2453 5677 6623 * 4391 4016 4982 4436 3228 * 4006 14 0 * * * * 1127 883 7338 0 1528 A 15 2077 * 6467 * 3806 5923 * 4110 * 2102 5099 6545 * * 6680 4472 2601 3437 * 5576 15 66 5927 5147 0 * 0 * 7368 1524 1000 G 16 6460 * 5163 * 5593 485 * * 3442 * * 4115 4820 5740 6473 6585 * * * * 16 60 6711 4997 0 * 0 * 7360 1000 1918 S 17 3575 4013 5098 3670 4465 4116 6154 5322 2346 6784 5482 * 5932 6454 3404 4393 3181 4014 5465 6430 17 0 * * * * 0 * 7338 0 2080 R 18 4210 * 2484 3253 5489 4240 4237 6885 3015 5732 * 4936 4359 5790 2972 3413 4180 7115 * * 18 40 6722 5818 0 * * * 7387 1000 0 T 19 4843 * 5880 1301 4903 6327 5474 * 4436 6802 * * 5996 4311 3711 3314 2870 5098 * 6668 19 57 6938 5037 2322 322 0 * 7543 1000 1409 V 20 5680 6726 4159 2288 5897 6675 5721 2671 6484 2895 6015 6911 * 5342 4732 4338 4515 2736 6243 5663 20 10 * 7190 * * 512 1743 7521 0 2176 R 21 4311 * 3326 2223 * * 4638 3993 4606 5240 6604 5235 * 3666 4781 3603 2812 3634 * 6969 21 26 6926 6706 2000 415 812 1217 7575 1000 1524 V 22 5614 * 5742 6954 2970 * 6537 2593 * 2171 5642 * * * 5265 * * 1658 5161 4805 22 49 * 4910 * * 0 * 7557 0 1570 D 23 5496 * 2630 1564 * 6806 6498 4544 5031 * * 4763 3611 4354 4556 3336 4679 4776 * * 23 87 7111 4286 0 * * 0 7552 1000 2494 V 24 3480 4513 * * 3048 6110 * 2595 * 2168 5612 * 5086 * * 4314 * 2295 5722 5633 24 72 * 4356 * * 1204 821 7516 0 3923 D 25 3154 * 3097 3383 * 3700 6016 6210 4564 5484 * 5722 1937 5117 5823 3049 4134 * * * 25 74 5518 5162 1008 992 744 1311 7402 1566 4112 G 26 3758 5167 2712 2257 6223 3333 4367 * 3873 5366 * 6690 3599 5106 4273 3483 5611 * * * 26 90 5028 5057 889 1120 1094 912 7427 2233 3359 D 27 4478 6544 3258 4219 * 1223 6941 6088 6875 * * 2932 3487 4875 * 3991 6764 * * * 27 168 5253 3583 0 * 858 1158 7559 1676 3462 A 28 2821 5406 5553 3388 * 4999 6716 4016 4413 4115 4507 6204 6232 7023 5028 2630 2878 3601 6586 6473 28 72 5086 5687 0 * 842 1177 7530 2065 4425 T 29 6834 * 4257 6416 * * 6717 * 5123 6360 6251 4102 5761 * 6704 3156 610 6657 * * 29 28 5697 * 0 * 468 1851 7553 1535 3651 V 30 4434 * * 6232 5598 * * 2409 * 1837 6821 * 5044 * * * 5562 1395 * 6481 30 0 * * * * 1093 913 7603 0 1636 G 31 2234 * 6057 3272 6763 2664 5803 6421 3690 4120 * 6482 * 3607 2934 4222 5786 5482 * 5713 31 11 * 6978 * * * 0 7627 0 1000 D 32 3056 * 1702 1834 * 5090 6536 * 5307 5751 * 5586 * 3679 6830 4948 4452 6509 6484 * 32 19 * 6291 * * * 0 7623 0 1576 A 33 3322 5628 * * 5073 * * 3150 6397 861 * * * * * * 6216 2723 6658 * 33 0 * * * * 1367 707 7585 0 2038 L 34 6540 5671 * * 3650 * * 2549 3879 1675 4510 * * 5083 3365 * * 2663 * 6698 34 0 * * * * * 0 7605 0 1630 D 35 2955 * 2645 2681 6830 5234 4749 * 3254 4389 * * * 3277 3420 4726 4087 4760 * * 35 16 * 6469 * * * 0 7605 0 1630 A 36 2677 * 6970 2830 5726 6392 4343 4726 3936 4066 4093 4446 * 3327 3382 5029 4613 5146 5882 4823 36 0 * * * * * 0 7584 0 2134 L 37 5005 * * 6245 3953 * 6585 2903 * 730 5717 * * 6873 * * * 3202 * 7007 37 74 * 4329 * * * 0 7584 0 2134 V 38 2442 4456 3947 3360 4443 3768 * 3457 4283 3841 5636 6858 * 5380 4385 4192 5737 3287 * * 38 17 * 6456 * * * 0 7519 0 3544 G 39 3056 * 3854 2130 * 3695 5491 6310 3593 4979 6677 4209 6965 4148 3392 3940 3900 * * * 39 80 5598 4913 1368 707 * 0 7464 1732 3638 A 40 4787 * 3406 3262 * 5103 6777 5002 2515 4220 6259 4487 * 3300 2192 * 4351 4639 * * 40 28 6961 6453 0 * * 0 7421 1000 4275 H 41 5768 5738 * 5258 2990 4701 2670 * 6705 4780 6946 3989 * 6695 4282 5464 * 5482 5479 1435 41 79 4542 6608 3122 176 3586 125 7406 2595 4360 P 42 5347 * 4283 4034 * 2639 * 5501 6672 6060 * 5571 813 5099 6253 6166 6772 * * * 42 49 * 4911 * * 1863 464 7441 0 4415 A 43 2691 * 3165 2347 * 2617 5469 * 6480 6654 6759 4813 5272 3422 3544 4536 6434 * * 5261 43 33 5458 * 603 1550 3628 122 7462 1612 4287 L 44 3612 * 5537 4507 3136 4541 * 4138 5281 1477 5096 6353 * 5660 4524 6439 4744 4940 4980 4774 44 17 6419 * 1000 1000 2305 326 7467 1000 4244 E 45 2737 6283 * 3090 4570 4178 6963 * 2539 4307 5437 5130 * 4407 3112 3462 5107 6179 4880 6681 45 40 * 5177 * * * 0 7487 0 3898 S 46 4194 * 3228 3024 * 4161 6773 * 2895 5307 * 3587 3816 5595 3277 2916 6669 4670 6332 5732 46 47 * 4975 * * 3283 156 7512 0 4191 R 47 2760 * 4868 2918 4263 6317 5743 4765 3378 3836 4998 * 6172 3751 3323 5188 5131 4608 5620 3991 47 63 * 4555 * * * 0 7499 0 4490 V 48 4755 * 5469 4720 3525 * * 2519 4465 1311 5266 * * * 6044 5357 5493 3251 * * 48 111 * 3756 * * 2371 310 7411 0 4897 F 49 6220 4840 4323 2843 2346 6239 6559 4558 6719 2185 * 6253 5414 6445 5498 5185 5188 4003 6187 3863 49 119 5560 4103 1000 1000 * 0 7363 1684 5176 G 50 3310 * 2093 3631 5135 3899 * 5295 4217 5417 4629 4078 4203 4853 4604 4674 4401 4210 * 5993 50 154 * 3306 * * 2959 199 7359 0 5666 D 51 4427 6295 2683 2452 * 3354 5664 5927 4305 6131 * 3293 3862 6053 4094 3520 6072 4132 * * 51 134 5186 4033 584 1586 1915 444 7338 1718 5957 D 52 4068 5662 2289 2965 5108 2544 5673 * 5238 4669 * 4125 4297 4772 5201 4556 4115 6185 5962 * 52 105 * 3837 * * 4322 74 7380 0 5602 G 53 3372 * 4086 3161 * 1439 * 5597 5090 4558 * 4663 6538 * 5087 3234 * 4521 6157 5164 53 62 5073 6322 0 * 3281 157 7293 1677 5922 E 54 3018 * 3739 2934 6177 3860 6620 4987 3611 4037 * 3755 4521 5986 3772 3918 4047 3830 * * 54 0 * * * * 2193 356 7344 0 5783 L 55 4812 6584 5411 4274 5439 4639 * 2756 6061 1643 5161 5943 3972 * 5354 4562 6042 2949 * 6272 55 0 * * * * 3402 143 7289 0 5968 Y 56 3329 6113 * 5285 4790 5275 4086 6213 2625 3583 * 5110 6044 3817 1884 6310 * 5808 6508 4231 56 86 5071 5166 674 1423 1920 443 7305 1676 5880 D 57 4396 * 2983 2684 * 4822 5874 5359 3421 5498 * 6093 2522 5201 3413 2777 6478 6475 * * 57 38 6155 6351 2807 222 974 1026 7380 1000 5032 H 58 4684 5771 4278 4790 3477 2999 4528 6922 4558 6366 * 4660 4996 5760 3683 3053 5755 3095 * 3174 58 0 * * * * 2217 349 7521 0 3986 I 59 4590 4930 6389 * 4061 5638 5438 1967 5678 3116 5521 * * * 6406 4349 4180 2116 6543 4618 59 34 * 5438 * * 2283 332 7524 0 3612 N 60 4528 * 5456 * * 6207 7080 2774 6938 2538 4135 2821 * 4544 2296 3640 5119 5413 * 6794 60 13 * 6812 * * 594 1566 7532 0 3897 V 61 3975 5391 * * 3276 6436 * 2021 * 3424 5068 * 6980 * 6743 6468 * 1390 * 5781 61 17 * 6419 * * 1028 972 7605 0 2482 L 62 1894 5900 * * 2935 6675 * 5381 * 2125 4071 5527 * * * 3621 4206 4673 * 3951 62 0 * * * * 1423 674 7630 0 2152 R 63 * 5841 5036 * 6881 * 5797 2386 4993 3060 6544 6450 * 5805 5080 6277 * 1027 * 6661 63 32 6296 6767 1000 1000 * 0 7631 1000 1620 N 64 6630 * 2159 4929 * 5737 * 6436 * * * 665 * 6468 5143 5640 * 6324 * * 64 12 * 6887 * * 1476 643 7628 0 2103 G 65 * * 3421 5279 5037 1015 4457 * 4344 5726 6278 5093 5567 3028 5735 5834 5666 * * * 65 56 5120 6748 918 1087 1662 548 7642 2178 2097 E 66 5383 6726 3976 2224 * * 5674 * 3221 5066 4078 5030 * 3188 2164 6478 4011 5228 * 6706 66 31 5542 * 0 * 1581 587 7627 1712 2108 A 67 6025 * 3067 5148 3691 * 3529 3780 4678 3226 5812 3671 3874 4374 4473 * 5699 4140 6490 3190 67 31 5549 * 2545 271 950 1052 7641 1674 1644 A 68 2166 6304 6448 5645 * 5368 6626 2205 6897 3586 6672 * 6498 * 6761 3978 4661 2166 6101 5671 68 380 2192 6331 1938 436 * 0 7645 5506 1000 A 69 3890 * 3218 3918 * 1827 6662 * 4056 5356 * 4491 3727 5034 3051 3847 4574 * * * 69 117 3912 6455 1871 461 * 0 7622 3575 1516 L 70 4887 * 2997 4118 4222 5502 6388 5595 5064 2187 4324 5538 2943 5231 4386 4066 * 5291 3957 * 70 41 5169 * 1568 594 484 1812 7602 2434 2074 G 71 4376 * 1563 2916 5935 4557 4539 * 4429 * 6407 3102 6767 4594 4604 3687 4838 * * * 71 40 5202 * 1388 694 0 * 7623 2093 1000 E 72 3001 6890 3220 3623 7065 4961 4898 * * 5931 * * * 3611 5217 4068 1642 4418 6898 4480 72 45 5010 * 2466 288 * * 7646 2133 0 A 73 3088 6317 6823 2800 * * * 5067 3891 3972 5993 7022 2217 4872 3472 6356 4784 2898 6498 * 73 57 4692 * 1486 637 * * 7646 2918 0 T 74 * * * * 5656 * * 2554 * 897 6301 * * * 6356 * 7076 2055 * * 74 19 6285 * 0 * * * 7646 1000 0 A 75 2903 * 4403 3517 5950 4730 4749 * 2190 6552 6301 3858 4395 3550 4495 3946 3881 6503 * 6925 75 14 6687 * 1000 1000 * * 7646 1000 0 A 76 3588 6530 1489 2871 * 4425 4064 * 5033 * * 3521 2959 5976 6503 6356 5548 * * * 76 0 * * * * * * 7646 0 0 G 77 4496 * 3629 4980 6503 814 6850 6092 5679 * * 3709 6857 4792 6835 4032 5076 * * * 77 28 5721 * 1222 808 * * 7646 1546 0 D 78 3459 * 567 5232 * 5576 * * * * * 6516 * 4415 6629 3372 6503 6533 * * 78 0 * * * * * * 7646 0 0 E 79 4646 6912 5147 1138 * * 6104 5506 6925 6448 * 5208 5565 6614 3740 5207 3190 2897 * 6813 79 12 6871 * 3170 170 * * 7646 1000 0 L 80 * * * * 6502 * * 1719 * 2742 6484 * * * * * * 931 * * 80 0 * * * * * * 7646 0 0 A 81 1358 * 3723 4794 4700 4832 5102 6720 6066 5374 6896 * * 5354 5570 3195 3781 3611 * 5100 81 14 * 6666 * * * * 7649 0 0 L 82 6331 6639 * * 2033 * * 1640 * 1940 * * * * * * * 2721 * * 82 0 * * * * 0 * 7646 0 1000 F 83 6702 * * * 1733 * * 2113 * 2000 4035 * * * * 6483 5633 3920 6108 4821 83 0 * * * * * * 7643 0 0 P 84 5795 * * * 6483 6660 * * * * 6793 * 357 5920 * 3479 4221 * * 6432 84 0 * * * * * * 7643 0 0 P 85 2929 * * * * * * 6734 5574 5726 6439 * 644 * 6951 4820 5352 3983 5662 5863 85 0 * * * * * * 7617 0 0 V 86 5542 * * 6436 3221 6711 * 2177 * 3942 3127 6718 6495 * * 6904 6654 1344 * 5914 86 0 * * * * * * 7605 0 0 S 87 1793 * 6977 * * 3007 4031 * 6831 * 5359 * * 6994 6800 1638 2886 * * 6462 87 0 * * * * * * 7605 0 0 G 88 * * * * * 34 * * * * * * * * * 5416 * * * * 88 0 * * * * * * 7579 0 0 G 89 * * * * * 0 * * * * * * * * * * * * * * 89 0 * * 0 * * * 7575 0 0 //