HHsearch 1.5 NAME c3nznA_ FAM FILE c3nznA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3nznA_.a3m DATE Sat Aug 28 18:02:09 2010 LENG 103 match states, 103 columns in multiple alignment FILT 115 out of 689 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.8 EVD 0.3922 -1.0163 SEQ >ss_dssp CEEECTTSCEEEEEECSSBCCSCEEEEECSSCHHHHHHHHHHHHHTBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEETTTEEEESCCHHHHHHH TTC >sa_dssp EECEBEEEDDACADDEEEEEDDEABBBBCCECEEACDACEBADECDBBABBBBBDCBDEEDDDEBCDCADECBEECCCAAAABDDEDCADCCDEECADDC AED >ss_pred CCEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCEEEEECCCHHHHHHH HCC >ss_conf 9606876503378778876778389997599836899999999719996399832477750147899999757875011589889079987998999997 389 >Consensus xxxxxlxxxxxxgxxxxxvxxxxVxlYsxxxCPxCxxakxxLxxxxixyxxvxIdxxxxxxxxxxxxexxxxxgxxxVPxixIggxxvixGfxxxeixxx Lgx >c3nznA_ SNAVNLFGQKDRGNHVSGVDRGKVIMYGLSTCVWCKKTKKLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTIINDEKAIVGFKEKEIRES LGF >UniRef50_B8C2V2(449-528:559) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C2V2_THAPS E=4e-05 s/c=0.61 id=17% cov=34% ----------------DEISSAPVVVYTYALSPFCTEVTALLNRCGIQYK-------------------------------------------------- --- >UniRef50_Q8LFQ6(25-127:135) Glutaredoxin-C4 n=7 Tax=Embryophyta RepID=GRXC4_ARATH E=1e-15 s/c=0.82 id=20% cov=81% ------------------ISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELD--EREDGWSIQTALGEIVGRRTVPQVFINGKHLggsddtVDAYES GELAKLLG- >UniRef50_A8P8M4(2-64:241) Predicted protein n=2 Tax=Agaricales RepID=A8P8M4_COPC7 E=0.0003 s/c=0.73 id=20% cov=59% ----------------------QITLYTAKICPWAHRAELALEESGLEYQRFEVDLANKPE-----WYAPKVNPASKVPALTYGGPK------------- --- >UniRef50_C7RUB4(81-169:180) Glutaredoxin n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RUB4_9PROT E=1e-13 s/c=0.87 id=20% cov=86% --------HRERGAATrSATTQPEVVMYATTWCGYCARARAFFAEHSISYVELDIERDARAEQMN------RLLGGGGIPTILVGKDGLVHGFDERALSR MLG- >UniRef50_Q9FB43(2-69:70) GcrD n=1 Tax=Corynebacterium striatum RepID=Q9FB43_CORST E=4e-06 s/c=0.78 id=19% cov=26% --------------------------------------------------------------------------HASAPVIVDEAGNSFSGFRPDKLRQA --- >UniRef50_B8LBT6(289-358:379) Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LBT6_THAPS E=9e-05 s/c=0.69 id=17% cov=64% ------------------VNRHKVMLFmkgipSSPRCGFSRQIVEILDSYNVSYDAFNILEDEE-----VRQGLKVYSDWPTYPQLYCGGELV------- -------- >UniRef50_B3L7Y8(124-212:219) Glutaredoxin-like protein n=8 Tax=cellular organisms RepID=B3L7Y8_PLAKH E=0.0002 s/c=0.53 id=19% cov=26% -------------------------------------------------------------------------PQLYINKELIGGHDIIkSMYDSGDLRE ---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * 1034 * * * 966 * * * * 1 0 * * * * * * 1699 0 0 N 2 * * 1864 * * * * * * * * 464 * * * * * * * * 2 0 * * * * * * 2583 0 0 A 3 885 * * * * * * * 2183 * * * * * * 2070 * * * * 3 0 * * * * * * 2583 0 0 V 4 * * * * * * * * * 1014 * * * * * * * 986 * * 4 0 * * * * * * 2583 0 0 N 5 * * * * * * 2070 * * * * 1906 * 1864 2183 * * * * * 5 0 * * * * * * 2583 0 0 L 6 * * * * * * * * * 0 * * * * * * * * * * 6 256 * 2620 * * * * 3359 0 0 F 7 * * * * 1391 * * * * 1312 * * * * * * * * * 2210 7 0 * * * * * 0 3019 0 1000 G 8 * * * * * 760 * * * * * * * * * 2210 2372 * * * 8 0 * * * * * 0 3019 0 1000 Q 9 * * * 2677 * * 2738 2708 * 2771 * * * 2735 * 2036 * * * * 9 0 * * * * 0 * 3673 0 1000 K 10 * * * 3301 * 2958 * * 1683 2963 * 3436 * * 3084 3061 * * * * 10 0 * * * * * * 4043 0 0 D 11 * * 2329 1237 * * * * 1960 * * * * * 3061 * * * * * 11 0 * * * * * * 4043 0 0 R 12 * * * 3023 * 2537 * * 2410 * * * * 3073 1330 * * * * * 12 127 * 3564 * * * * 4176 0 0 G 13 3409 * * * * 304 * * * * * * * * * 3383 * * * * 13 134 3496 * 1585 585 * 0 4445 1000 1000 N 14 3539 * 2633 * * * * * * * * 2815 3478 3541 * 1971 3510 * 3441 * 14 0 * * * * * 0 4582 0 1000 H 15 2264 * * 2653 * * 1756 * * * * * 3605 3520 * * * 3495 * 3670 15 0 * * * * * 0 4762 0 1000 V 16 3800 * 3741 2897 3846 * * 2313 * 3165 * * 3900 * * * 3975 2277 * * 16 201 3975 3912 0 * * 0 4997 1000 1000 S 17 3223 * 2381 * * * * * 4154 * * 4021 2677 * 2929 2580 2963 * * * 17 58 * 4676 * * * 0 5276 0 1603 G 18 2100 * * 4088 * 1540 * 3810 * * * * 3163 * * 3046 * 4059 * * 18 83 4166 * 1585 585 * 0 5372 1000 2059 V 19 5143 * 4838 4774 * * * 1594 * 5016 * * * 4832 3954 5034 5085 1402 * * 19 0 * * * * * 0 6326 0 2059 D 20 4037 * 2580 2839 * 5262 * * 5208 * * 2009 5405 5348 5028 2698 3355 * * * 20 29 * 5658 * * 1340 725 6549 0 2059 R 21 3682 * 4446 3512 * * 5500 * 2226 * * 5416 4538 5750 3140 1856 4127 5591 * * 21 0 * * * * 1673 543 6921 0 2121 G 22 2646 * 4166 4583 * 2421 3019 * 4230 6026 * 2131 3771 5678 * * 4536 * * * 22 0 * * * * 1167 850 7052 0 1616 K 23 4684 * 3471 3504 * 6672 * 6099 1751 * * 3263 3734 4347 3222 4026 4781 5162 * * 23 44 5062 * 0 * 0 * 7713 1731 1000 V 24 * 5918 * * 5630 * * 1518 * 2846 * * * * * * * 1108 * 6503 24 0 * * * * * * 7846 0 0 I 25 4495 5554 6793 3223 6090 * * 2820 3244 5714 5872 * * * 4631 5871 2275 2104 * 5407 25 0 * * * * * * 7864 0 0 M 26 6152 * * * 5099 * * 2606 * 1419 2955 * * * * * * 1897 * 5554 26 0 * * * * * * 7864 0 0 Y 27 5336 * * * 1422 * * 5983 * 5406 * * * * * * * * * 830 27 26 5805 * 1431 668 * * 7871 1493 0 G 28 3376 * * 6463 6269 3294 5556 6964 * 5728 5278 6528 * 5049 * 1952 1897 3489 6913 4715 28 0 * * * * * * 7871 0 0 L 29 2930 * * * 4981 6977 6242 5769 2214 4074 4823 4496 * 6012 3025 3115 3061 6755 5343 4815 29 49 4891 * 2032 405 * * 7871 2273 0 S 30 4285 * 3969 3637 6505 5089 6433 * 4255 6465 5460 5283 2315 * 4249 2202 2758 5527 * * 30 0 * * * * * * 7871 0 0 T 31 * 5775 5136 5146 4276 2431 5823 5812 6505 5575 5650 3537 5361 4900 4476 3717 3284 6977 2969 3360 31 0 * * * * * * 7871 0 0 C 32 * 78 * * * 5868 * * * * * * * * * 4807 * * * * 32 0 * * * * * * 7900 0 0 V 33 7024 5048 * 6672 * 3339 * 5868 4353 * 5030 * 733 5212 5152 3973 5951 5628 * * 33 11 7080 * 0 * * * 7900 1000 0 W 34 5832 * 4453 * 2472 6849 3388 6024 7357 5323 5140 6893 3232 6944 6407 5016 * 6897 3498 1667 34 0 * * * * * * 7900 0 0 C 35 4972 270 * * * * * * * * * * * * * 3162 6024 6433 * * 35 0 * * * * * * 7900 0 0 K 36 3672 7065 4234 4583 * 6228 3179 5252 2663 * 6932 4041 5313 3588 2759 5460 3601 4229 6631 5811 36 0 * * * * * * 7900 0 0 K 37 3027 * 7012 4006 6944 5373 6228 5416 2005 5878 5477 5464 * 3177 2166 4460 5155 5635 * * 37 0 * * * * * * 7900 0 0 T 38 1190 * * 6116 * * * 4423 * 2711 * * * 6309 * * 3309 2093 * * 38 21 6137 * 0 * * * 7900 1000 0 K 39 4638 * 6201 4411 * * 5571 3663 1028 4551 5100 * * 5758 2547 * 5957 5000 * * 39 0 * * * * * * 7900 0 0 K 40 2836 * 4147 2733 6260 6016 * 5562 3225 3254 6043 3593 4900 4093 3273 3996 5893 6629 6893 * 40 0 * * * * * * 7900 0 0 L 41 3525 7104 * * 2504 * * 3319 5859 2026 5758 6819 * 6847 6046 * 4519 3662 4445 2767 41 13 6804 * 1585 585 * * 7900 1000 0 L 42 5564 * * * 2475 * * 4279 * 630 4300 * * * * * * 5448 * 5168 42 18 6309 * 2322 322 * * 7900 1000 0 T 43 2774 * 2459 2630 * 6317 * 6043 3168 4970 * 4560 * 3188 3174 4757 5843 6020 * 7193 43 0 * * * * * * 7900 0 0 D 44 3128 * 3265 1968 6545 4242 6870 5967 2937 6448 * 4520 * 4156 3944 3314 6921 * * 5484 44 45 5404 7106 0 * * * 7900 1581 0 L 45 3616 6849 5223 5109 4362 * 4279 5289 2778 2050 5010 3670 * 6176 3403 5222 5509 5632 * 4206 45 38 5251 * 1868 462 * 0 7903 1957 1000 G 46 5013 * 4836 4009 * 1411 4541 * 3367 * * 2369 * 4827 4415 3853 * * * 6483 46 15 6633 * 1585 585 0 * 7903 1000 1000 V 47 3605 * * 6333 5194 * 6043 1643 6201 2930 7134 * 5103 4702 6312 * 5071 1894 * 6415 47 43 5592 6907 0 * * * 7900 1649 0 D 48 3775 * 2927 2493 * * 6197 * 2913 * 6327 4073 2101 5643 4799 4174 4488 6555 * * 48 62 * 4574 * * * 0 7904 0 1000 F 49 4779 * * * 1776 * 4932 6956 5948 5075 * 5436 3654 * 6199 * * 6556 7081 1150 49 19 6244 * 1585 585 774 1268 7818 1000 3028 D 50 4461 * 2872 1968 5395 * * 5286 3001 7078 * 4775 5397 3852 4917 4440 3204 4243 * 6536 50 12 * 6938 * * * 0 7852 0 1729 Y 51 4505 6544 4072 2250 4490 5045 6483 4441 6230 3286 5495 6046 * 5228 5926 3576 4670 2748 5443 4255 51 12 * 6871 * * 1563 596 7848 0 2263 V 52 * 5436 * * 4730 * 4241 2492 3224 4278 5237 6263 * * 3707 * * 1548 * 3445 52 11 7028 * 1585 585 595 1566 7861 1000 2193 Y 53 5020 6921 1879 2621 6567 5460 5142 4585 * 5691 5837 1844 6756 7317 5475 6715 5022 5475 * 7158 53 21 * 6119 * * 0 * 7863 0 1000 V 54 * * * * 5759 * * 1404 6910 2922 7143 * * * * * 4796 1325 * 5555 54 183 4981 3518 1650 554 * 0 7854 2161 1000 D 55 6254 * 1266 2105 6150 5424 * 6223 6208 4719 * 4233 6398 6712 * 4900 3556 4531 * * 55 122 6114 3912 1585 585 * 0 7836 1000 4016 R 56 4591 * 4618 2447 6191 * * 4580 3574 2603 5519 4226 5839 5166 2824 4432 4202 4607 * 5223 56 135 * 3488 * * * 0 7789 0 4938 L 57 3652 5840 2095 5499 4924 6235 * 2663 6268 2433 5400 4487 * 4434 4448 5534 6604 5239 * 5278 57 14 * 6726 * * 3183 168 7711 0 5584 E 58 4048 * 3225 2150 6095 6298 5303 6294 4228 6849 * 4292 2434 5142 4098 3418 4351 6110 * * 58 56 * 4721 * * 2492 282 7723 0 5360 G 59 3423 6475 3992 2209 6103 3544 6000 4301 4277 6285 6144 3802 4456 5353 5007 4195 4405 3915 5042 * 59 99 6573 4167 1000 1000 1449 658 7723 1000 5448 K 60 2396 * 2927 3344 6667 3723 6190 4725 3975 6444 5134 4553 5962 5960 3989 3364 3979 4598 * * 60 103 6485 4114 1000 1000 3220 164 7710 1000 5267 E 61 3879 * 3043 2115 4306 5214 4491 4848 3028 4809 * 4686 5553 4575 4128 4820 6101 * * 4167 61 81 * 4187 * * 1502 628 7598 0 5523 E 62 3457 6383 2979 2544 5581 3830 6175 5259 5201 4428 6247 3203 6481 3554 6817 3592 5387 4788 * 5390 62 71 * 4377 * * 2174 362 7557 0 5074 E 63 4625 * 3373 2272 * 4374 4661 4584 2893 6459 4224 4191 3834 4651 3808 4613 * 5195 6450 6466 63 38 6332 6184 0 * 3201 166 7554 1000 5083 E 64 3317 * 3253 2418 4221 5084 * * 2763 4063 4566 4504 4708 3461 6532 3833 6529 * * 6595 64 51 6772 5280 0 * 1798 489 7576 1000 4924 A 65 2159 * 5328 3445 4454 5350 * 2974 3962 3420 4895 6282 5252 5412 5238 5653 6441 3365 * 4230 65 79 6514 4551 1585 585 1268 774 7603 1000 4883 V 66 3136 * 4660 4975 3556 * 6617 4768 4354 2488 6303 5564 5286 3456 2878 * 5992 3171 * 4556 66 17 * 6395 * * 2562 268 7607 0 4548 E 67 3239 * 4025 2797 4763 * * 5469 3079 4276 4798 3591 4101 2928 4319 5500 5438 5014 6157 6569 67 15 * 6549 * * 1263 778 7631 0 4423 E 68 2926 * 4781 1243 5488 4580 6244 6710 5025 5032 4221 5353 * 4713 6605 5492 * 4402 4818 5062 68 35 * 5397 * * 2091 386 7609 0 3656 V 69 4504 4523 5269 * 4058 6671 * 4211 * 2181 2935 5342 5539 5974 4775 6572 5024 2654 5430 3481 69 19 * 6262 * * 3296 155 7542 0 3951 R 70 4536 * * 3659 6200 4144 6385 4079 2333 3136 5105 4380 6199 3999 3534 4880 5084 3948 5268 5041 70 97 6405 4237 1000 1000 1192 830 7527 1000 4174 R 71 3248 * 4893 3333 * 5496 * 5652 1889 4930 * 5624 4552 3913 3172 3578 5760 4217 * 5583 71 18 6366 * 0 * 3077 182 7493 1000 4235 F 72 4750 * 4171 5153 5060 4479 3920 3376 3564 2336 4672 5662 6628 5464 4253 4633 3707 4121 * 4611 72 57 * 4686 * * 1381 699 7501 0 4102 N 73 5624 6767 4982 * 4355 3690 6529 5471 5323 4146 * 2549 6334 5587 6110 2788 2321 4012 * 3789 73 121 4909 4406 336 2269 159 3263 7523 2281 4172 P 74 6693 5763 3794 6660 * 997 5663 * 3764 6677 * 3857 2730 * 5584 4822 * * 6670 * 74 68 4750 6868 1698 532 * 0 7525 2359 2882 S 75 4173 * 5302 4827 6586 4448 4985 4698 3860 6524 6213 3901 5680 2463 3088 3547 * 3924 5735 3201 75 22 6940 7104 0 * 2187 358 7520 1000 3193 V 76 5273 * 5038 5157 * 3745 4797 3801 3934 4043 4107 5245 4601 4310 2873 3413 3748 3592 * 4522 76 28 6696 6701 4000 93 369 2147 7555 1000 2944 S 77 3638 * * * * 2735 6569 4494 4486 4403 * * 5440 3821 6479 2035 2328 5677 * 4188 77 11 * 7022 * * 926 1078 7738 0 1625 F 78 4580 * * * 2873 * * 3029 * 3802 * * * * * * 5577 792 * 5106 78 0 * * * * 0 * 7748 0 1623 P 79 * * * * * * * * 6867 * * 5398 47 * * * * * * * 79 14 * 6743 * * * * 7753 0 0 T 80 3194 4963 * * 5793 6866 6081 4640 7412 3547 5296 5417 5725 2693 4614 4438 2498 2403 * 6589 80 14 6739 * 4087 87 0 * 7750 1000 1000 T 81 * * * 4953 3316 * * 1895 * 2277 6486 * * * * * 3439 1792 * * 81 15 6575 * 0 * * * 7753 1000 0 I 82 * * 5205 4475 2027 * * 2869 * 3223 5836 * * * 4778 6233 4842 1879 5801 4426 82 12 * 6961 * * * * 7753 0 0 I 83 6653 6597 5432 * 4167 * 6693 1225 * 3354 6519 * * * * 6571 4587 1976 6489 4747 83 32 5515 * 1183 838 0 * 7742 1538 1000 N 84 6640 5520 2384 4749 * 1278 * * 4586 * * 2726 4651 * 5263 4752 6307 * * 5730 84 54 * 4768 * * * * 7742 0 0 D 85 7843 * 1989 5534 * 1209 6513 * 4664 * * 2883 * 6387 5907 5035 4874 * * 6593 85 202 5663 3169 2362 312 0 * 7737 1629 2474 E 86 5965 * 3045 1655 6319 2888 6003 6476 2891 * * 4817 5265 3549 5139 5579 6340 5187 * * 86 222 6468 2928 2000 415 0 * 7533 1000 4003 K 87 * 6302 3874 3870 5462 5321 3318 5859 2239 4271 * 5957 * * 2582 3716 5059 3801 5685 4590 87 77 5479 5075 0 * 149 3352 7519 1718 4192 A 88 4813 * * 5173 3494 * 5586 2773 * 2872 5581 * 4533 6322 6362 7462 6233 1453 4705 4926 88 79 5284 5185 2585 263 0 * 7556 1596 2463 I 89 5842 5201 * 6000 4160 * 4143 1476 * 2841 5206 * * 4652 * 5911 * 2236 4940 * 89 69 5809 5102 1368 707 981 1019 7302 1811 1592 V 90 3272 5509 4983 3724 6048 2782 6466 3258 5869 3573 * * 7806 5902 5192 4024 4388 2220 5843 * 90 0 * * * * 534 1692 7252 0 2040 G 91 4971 * 5715 5950 * 309 * * * * 4117 4893 * * * 4854 * * * * 91 27 5780 * 0 * 0 * 7226 1000 1000 F 92 4150 * 5975 * 958 5940 4407 * * 5122 * * 3879 * * * * 4362 6113 2397 92 0 * * * * * * 7248 0 0 K 93 4827 * 1798 3114 * 5633 * * 3861 6267 * 3777 3703 3647 3476 3479 4304 * * * 93 0 * * * * * * 7131 0 0 E 94 4821 * 4343 2517 5792 5612 * 3842 3918 4561 * * 2300 4259 4436 2561 4649 * * 6255 94 0 * * * * * * 7118 0 0 K 95 2883 * 2279 2932 * 3100 * * 2944 4939 * 4870 4424 4579 4273 * 4139 5881 * * 95 0 * * * * * * 7051 0 0 E 96 2820 * 3912 1353 * * * * 2062 4302 * * * 4068 5008 * 5670 * * * 96 0 * * * * * * 7034 0 0 I 97 3980 * * * 4705 * * 1046 * 2075 4924 * * * 5765 * * 3199 5939 * 97 0 * * * * * * 6940 0 0 R 98 4021 * 2964 3212 5461 * * 4751 2500 3791 * 5004 * 4681 2446 4203 * 3549 * * 98 0 * * * * * * 6940 0 0 E 99 2891 * 4186 1856 * * 3986 * 2193 5866 * 5860 * 3265 3706 4744 * * * * 99 0 * * * * * * 6908 0 0 S 100 1642 * * 3208 3953 * * 4274 3953 2627 5769 * * 5443 5673 3432 5421 * * 4271 100 0 * * * * * * 6580 0 0 L 101 * * * * 5587 * * 3590 5165 507 * * * * * * * 2603 * * 101 0 * * * * * * 6539 0 0 G 102 1719 * * * * 522 * * * * * * * * * * * * * * 102 0 * * * * * * 5235 0 0 F 103 * * * * 2318 * * * * 323 * * * * * * * * * * 103 0 * * 0 * * * 2935 0 0 //