HHsearch 1.5 NAME c3nrlB_ FAM FILE c3nrlB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3nrlB_.a3m DATE Sun Aug 29 00:01:43 2010 LENG 69 match states, 69 columns in multiple alignment FILT 10 out of 14 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.4 EVD 0.4274 0.7019 SEQ >ss_dssp CEEEEEEETTTTEEEEEEETTEECCCCCTTCEEEEEETTEEEEEEEEESSSEEEETCCCSCCTTCEEEC >sa_dssp EDBDACDBEEDCCBBADBEEECDDEBADDDCEBCACDEEEDCEBDACDDEEBDBDECEDEEBDECEACD >ss_pred CCEEEEEECCCCEEEEEEECCCCCCCEECCCEEEEEECCEEEEEEEECCCCEEEEEEEHHHCCCEEEEC >ss_conf 940577642688154795315443652058469999979996013521773589843034324447339 >Consensus kxGxLxynxxnxRYxilxxxxxxxxGxHCGexleVxvxxkWvxtRiEmxxxWYLvglxxxxLeglrvRx >c3nrlB_ REGTLFYDTETGRYDIRFDLESFYGGLHCGECFDVKVKDVWVPVRIEXGDDWYLVGLNVSRLDGLRVRX >UniRef50_C0CJJ6(37-104:105) Putative uncharacterized protein n=13 Tax=Bacteria RepID=C0CJJ6_9FIRM E=5e-17 s/c=1.31 id=58% cov=100% KQGALIFDEQTDRYDIRFDLADYYGGLHCGETFDVMVGGRWRPTRIEMAENWYLVGIHADDLSGLRVR- >UniRef50_A8S015(2-72:74) Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8S015_9CLOT E=2e-14 s/c=1.13 id=55% cov=100% KQGTLFYDKESGRYDFCYDCDGetvNYGGIHCGEVFEFCLNDVWVPARVEMYEDWYLVGLPGLKMEGLEVR- >UniRef50_B2THD8(4-75:76) Putative uncharacterized protein n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2THD8_CLOBB E=0.0006 s/c=0.63 id=41% cov=100% RTGILGYNYNNERYSILNAMDLWEdSGLHCGEVLEVFIDGKWIADRIEIGKgEWYLIysKLHGEQLEGLRIR- >UniRef50_A7VFF8(3-60:76) Putative uncharacterized protein n=7 Tax=Clostridiales RepID=A7VFF8_9CLOT E=2e-10 s/c=1.16 id=39% cov=83% KQGRLGYNSSNDRYGLLASDLWIDTGFHCGEGLEVLVDDKWVRTRMEMNParEWYLVG------------- >UniRef50_C0EYN7(4-78:83) Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EYN7_9FIRM E=0.0002 s/c=0.63 id=33% cov=100% KEGRLGYNRKNDRYGLLVTDLWEIDGFSCGNRLQVEINGEWVDTHMEMDWStgkgiWYLTGtdLKGSALENKRVR- >UniRef50_Q18AX3(4-71:72) Putative uncharacterized protein n=22 Tax=Clostridiales RepID=Q18AX3_CLOD6 E=3e-19 s/c=1.41 id=57% cov=100% KTGALIFDETADRYDIRFDLNDYYGGLHCGDCLEVFVRGKWKPTRMEYGDNWYLVGVRASDLNGLRVR- >UniRef50_UPI0001C34FED(2-72:75) hypothetical protein ClM62_19227 n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34FED E=3e-18 s/c=1.31 id=43% cov=100% REGRLGYNCENGRYGLLSMDLWVDTGFHCGECMEVLVDDKWVKTRMEMNPamEWYLVGTPyCGDLEYVRAR- >UniRef50_B2THD8(4-75:76) Putative uncharacterized protein n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2THD8_CLOBB E=2e-14 s/c=1.12 id=41% cov=100% RTGILGYNYNNERYSILNaMDLWEDSGLHCGEVLEVFIDGKWIADRIEIGKgEWYLIysKLHGEQLEGLRIR- >UniRef50_C0ESV7(3-75:82) Putative uncharacterized protein n=2 Tax=Eubacterium hallii DSM 3353 RepID=C0ESV7_9FIRM E=2e-14 s/c=1.10 id=41% cov=99% -EGRLSYNCNNDRYGLLVSDLWEYEGFHCGDPLEVKVDDKWIHTRIEMAWDekgghWYLVGTPYfDNLEYVCVR- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * * * * * * 740 * * * * * 1318 * * * * * 1 0 * * * * * * 2415 0 0 E 2 * * * 1283 * * * * * * * * * 1710 * * 1819 * * * 2 0 * * * * * * 2466 0 0 G 3 * * * * * 0 * * * * * * * * * * * * * * 3 0 * * * * * * 2466 0 0 T 4 2285 * * * * * * 2467 * * * * * * 1386 * 2112 * * * 4 0 * * * * * * 2466 0 0 L 5 * * * * * * * * * 0 * * * * * * * * * * 5 0 * * * * * * 2466 0 0 F 6 * * * * 2112 1083 * 2285 * * * * * * * 3450 * * * * 6 0 * * * * * * 2466 0 0 Y 7 * * * * 2285 * * * * * * * * * * * * * * 331 7 0 * * * * * * 2466 0 0 D 8 * * 1196 * * * * * * * * 828 * * * * * * * * 8 0 * * * * * * 2466 0 0 T 9 * 2442 * 2285 * * * * 2900 * * * * * 2948 3858 3360 * * 2467 9 0 * * * * * * 2466 0 0 E 10 * * * 1626 * * * * 2948 * * 1877 * 3283 * 3858 3286 * * * 10 0 * * * * * * 2466 0 0 T 11 3286 * * * * * * * * * * 828 * * * 2900 2321 * * * 11 0 * * * * * * 2466 0 0 G 12 * * 1014 2467 * 1626 * * * * * * * * * * * * * * 12 0 * * * * * * 2466 0 0 R 13 * * * * * * * * * * * * * * 0 * * * * * 13 0 * * * * * * 2466 0 0 Y 14 * * * * * * * * * * * * * * * * * * * 0 14 0 * * * * * * 2466 0 0 D 15 * * 1196 * * 1386 * * * * * * * * * 2467 * * * * 15 0 * * * * * * 2466 0 0 I 16 * * * * 2900 * * 1048 * 1386 * * * * * * * * * * 16 0 * * * * * * 2466 0 0 R 17 * 2900 * * * * * * * 828 * * * * 1724 * * * * * 17 0 * * * * * * 2466 0 0 F 18 3858 * * * 1724 * * * * * * 2467 * * * 3434 * 2178 * 2900 18 128 3562 * 0 * * * 2466 1000 0 D 19 3378 * 1196 * * * * * * * 2496 * * * * 2640 2948 * * * 19 0 * * * * * * 2466 0 0 L 20 * 2900 1098 * * * * * * 1724 3378 * * * * * * * * * 20 0 * * * * * * 2466 0 0 E 21 3283 * 2119 3360 * * * * * 1098 * 3287 * * * * * * * * 21 0 * * * * * * 2466 0 0 S 22 * * 2285 * * 2900 * * * 3378 * * * * * 3360 * * 1098 * 22 207 2900 * 1585 585 * * 2466 1000 0 F 23 * * * 1710 3360 * * 3858 * * * 2900 * * * * * 3434 3378 2285 23 0 * * * * * * 2466 0 0 Y 24 * * 2022 3378 * * * 2948 * * * * * * * * * * * 921 24 146 3378 * 0 * * * 2466 1000 0 G 25 * * 2948 3450 * 1196 * * * * * * * * * 2467 2630 * * * 25 0 * * * * * * 2466 0 0 G 26 * * * * * 0 * * * * * * * * * * * * * * 26 0 * * * * * * 2466 0 0 L 27 * * * * 1386 * * 2900 * 1048 * * * * * * * * * * 27 0 * * * * * * 2466 0 0 H 28 * * * * * * 200 * * * * * * * * 2948 * * * * 28 0 * * * * * * 2466 0 0 C 29 * 0 * * * * * * * * * * * * * * * * * * 29 0 * * * * * * 2466 0 0 G 30 * * * * * 0 * * * * * * * * * * * * * * 30 0 * * * * * * 2466 0 0 E 31 * * 2366 564 * * * * * * * 2948 * * * * * * * * 31 0 * * * * * * 2466 0 0 C 32 * 1774 * * * 3858 * * * * * * 3450 * 2948 * 3283 1667 * * 32 0 * * * * * * 2466 0 0 F 33 * * * * 1582 * * * * 803 3434 * * * * * * * * * 33 0 * * * * * * 2466 0 0 D 34 * * 2321 577 * * * * * * * * * 2948 * * * * * * 34 0 * * * * * * 2466 0 0 V 35 * * * * 2900 * * * * * * * * * * * * 207 * * 35 0 * * * * * * 2466 0 0 K 36 * 2900 * 2948 1819 * * * 2404 2630 3283 * * * * * * * * * 36 0 * * * * * * 2466 0 0 V 37 * * * * * * * 1688 * 2900 * * * * * * * 848 * * 37 0 * * * * * * 2466 0 0 K 38 * * 1205 * * 3283 * * 3360 * * 1924 * * 3287 * * * * * 38 0 * * * * * * 2466 0 0 D 39 * * 1046 * * 956 * * * * * * * * * * * * * * 39 0 * * * * * * 2466 0 0 V 40 * * * 2948 * * * * 899 * * * * * 3283 * * 2112 * * 40 0 * * * * * * 2466 0 0 W 41 * * * * * * * * * * * * * * * * * * 0 * 41 0 * * * * * * 2466 0 0 V 42 * * * * * * * 1877 3286 * * * * * 3283 * * 937 * * 42 0 * * * * * * 2466 0 0 P 43 2467 * 2948 * * * 3450 * 3434 * * * 1196 * 3858 * * * * * 43 0 * * * * * * 2466 0 0 V 44 2900 * 2467 * * * * * * * * * * * * * 767 3360 * * 44 0 * * * * * * 2466 0 0 R 45 * * * * * * 2948 * * * * * * * 200 * * * * * 45 0 * * * * * * 2466 0 0 I 46 * * * * * * * 1082 * * 1345 * * * * * * 2900 * * 46 0 * * * * * * 2466 0 0 E 47 * * * 0 * * * * * * * * * * * * * * * * 47 0 * * * * * * 2466 0 0 X 48 * * * * * * * 2322 * * 546 * * * * * * * * 3118 48 0 * * * * * * 2398 0 0 G 49 2364 * 2948 * * 1393 * * * * * 2630 * * * * * * * 2900 49 0 * * * * * * 2466 0 0 D 50 * * 2323 2079 * * * * 2467 * * * 2630 * * * * * 2178 * 50 605 1546 * 579 1597 * * 2466 1541 0 D 51 * * 1631 1546 * * * * * * * 2285 * * * 2948 * * * * 51 360 2178 * 2322 322 * * 2466 1356 0 W 52 * * * * * * * * * * * * * * * * * * 0 * 52 0 * * * * * * 2466 0 0 Y 53 * * * * * * * * * * * * * * * * * * * 0 53 0 * * * * * * 2466 0 0 L 54 * * * * * * * * * 0 * * * * * * * * * * 54 0 * * * * * * 2466 0 0 V 55 * * * * * * * 2467 * * * * * * * * 2948 536 * * 55 288 2467 * 1000 1000 * * 2466 1063 0 G 56 * * * * * 288 * * 2467 * * * * * * * * * * * 56 216 2845 * 1000 1000 * * 2466 1000 0 L 57 * * * * * * * 3203 * 804 * * * * * * 2245 3214 * * 57 0 * * * * * * 2460 0 0 N 58 * * * * * * 1735 * 2851 * * 3295 1509 * 3214 * * * * * 58 165 3211 * 0 * * * 2460 1000 0 V 59 2208 3211 * * * 1087 * * * * * * * * * * * 3295 * 3280 59 157 3280 * 0 * * * 2460 1000 0 S 60 * * 2241 2383 * 3211 * * * 2831 * * * * * 1522 * * * * 60 0 * * * * * * 2460 0 0 R 61 2851 * 1624 * * * * * 2831 * * 3280 * 2383 3295 * * * * * 61 0 * * * * * * 2460 0 0 L 62 * * * * * * * * * 218 2831 * * * * * * * * * 62 0 * * * * * * 2460 0 0 D 63 * * 3295 553 * * * * * * * 3214 * * * 3203 * * * * 63 0 * * * * * * 2460 0 0 G 64 * * * * * 620 * * * * * 2851 * * * * * * * 2245 64 0 * * * * * * 2460 0 0 L 65 * * * * * * * * 2851 620 * * * * * * * 2245 * * 65 0 * * * * * * 2460 0 0 R 66 * 3280 * 2831 * * * * * * * * * * 402 * * * * * 66 0 * * * * * * 2460 0 0 V 67 3211 * * * * * * 2383 * * * * * * * * * 514 * * 67 0 * * * * * * 2460 0 0 R 68 * * * * * * * * * * * * * * 0 * * * * * 68 0 * * * * * * 2460 0 0 X 69 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 69 0 * * 0 * * * 1000 0 0 //