HHsearch 1.5 NAME c3lgcA_ FAM FILE c3lgcA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3lgcA_.a3m DATE Sun Aug 29 00:05:28 2010 LENG 89 match states, 89 columns in multiple alignment FILT 103 out of 1004 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 8.0 EVD 0.4151 0.0960 SEQ >ss_dssp CCSCCEEEEECTTCHHHHHHHHHHHHTTCCCEEEECCCHHHHHHHHHHHHHHTCCSSCCCSSCEEEETTEEEESHHHHHHTHHHHHTTC >sa_dssp EEEBEBCACADEEBDEBDDACDBADECEBECECCDBEDEDDBDEBBEEBDEDEECECEBEEBBAABADEEBBABCEDAEEDCEEBDEDE >ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECHHHHHHHHHHHHCC >ss_conf 98747999963999768999999997499937998224877799999999974203666767769999969970279999998774159 >Consensus xxsxkVxiytxxxCpxCxxakxxLxxxxixyxxxxixxxxxxxxxxxxxxxxxxxxxxxxtvPxifixgxxigGxxelxaxlxxllxxx >c3lgcA_ SNAXKVKIYTRNGCPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEXNQSGKVIFPISTVPQIFIDDEHIGGFTELKANADKILNKK >UniRef50_D0MYA7(366-450:458) Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0MYA7_PHYIN E=9e-16 s/c=0.99 id=18% cov=94% -NQNPLVLFSKSYCPYCKKTKETLASLGAKPVVFELDTREDGAAIQAF----LFRLTRQSTVPNLFIKGKSVGGNDNVQElqRSGELVDR- >UniRef50_A4RT70(63-134:311) Predicted protein n=2 Tax=Ostreococcus RepID=A4RT70_OSTLU E=2e-08 s/c=0.84 id=21% cov=82% ----RVTLYQYDVCPFCNKVKAFLDYHGTPYDVVEVNPMTKG--------ELGWVEDGWKKVPIVTVGDEKLNDSSAIIAELTK----- >UniRef50_Q56EV4(2-90:91) NrdH glutaredoxin n=3 Tax=unclassified T4-like viruses RepID=Q56EV4_9CAUD E=7e-06 s/c=0.58 id=20% cov=89% -----IEIYGivseTSRCPACDVITKRLDEDDIDYTIKTVLRDAETelgfeydRAVINELRDRINQPKGALSLPKVFVNGTFIGGAQALLDYLD------ >UniRef50_Q9FGG8(120-212:273) Emb|CAB72177.1 n=1 Tax=Arabidopsis thaliana RepID=Q9FGG8_ARATH E=0.0002 s/c=0.51 id=20% cov=79% ----------RPTFEACKSVTSILHSFPVRIDERDLSMDASFSTELQRifgkDQNQNQNQAKTPKLPRVFIGGRYIGGAEEVK---------- >UniRef50_A6X6A1(4-72:88) Glutaredoxin n=5 Tax=Proteobacteria RepID=A6X6A1_OCHA4 E=1e-06 s/c=0.79 id=22% cov=73% -----ILIYTTPTCPDCHALKRWLSEQGLSYEERDLSEPEIAEEAKA---RTGVRVAPITIVGSEIFYGTFV----------------- >UniRef50_A3U705(102-181:181) Putative uncharacterized protein n=1 Tax=Croceibacter atlanticus HTCC2559 RepID=A3U705_9FLAO E=2e-05 s/c=0.63 id=12% cov=91% -----IVIFEKTDCGRCQTTMAYLNAKNKPYAKLNITDNPMYNQLMWELLELNGYLGDSVKTPVILVNGAISFSHEDLEGFLEQL---- >UniRef50_C1FDI3(123-202:215) Glutaredoxin-related protein (Fragment) n=2 Tax=Micromonas RepID=C1FDI3_9CHLO E=3e-09 s/c=0.79 id=12% cov=81% -SSSRIVVFIKgsrsnPECGFSHRVCMIMDELRVEYETVDTLDEVHNHNL----RNVLKRFSDWPTIPQVYFNGVFLGGHD------------- >UniRef50_A6EQL4(121-203:205) Putative uncharacterized protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6EQL4_9BACT E=0.0004 s/c=0.55 id=19% cov=88% --AGKIVLFTEAACEKCQLLHTELDVNRIEHQVFDIDENQELYKQFIAFVRKKFPETQAMRLPVIWNKDKLLFGWNQLE---------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 294 2440 * * * 1 0 * * * * * * 3246 0 0 N 2 * * 3085 * * * * * * * * 858 * * * 1597 * * * * 2 0 * * * * * * 5014 0 0 A 3 1719 * * 4910 * * * * * * * 4985 * 3476 * 983 4806 * * * 3 0 * * * * * * 6412 0 0 X 4 2979 4151 * * * 3546 2267 * * 4956 * 2001 3309 3757 * 3909 * * * * 4 0 * * * * * * 6385 0 0 K 5 5545 * 4210 3603 * * * * 1059 * * 6801 4473 4028 2541 5865 4110 * * * 5 0 * * * * * * 7630 0 0 V 6 * 6301 * * * * * 1440 * 4573 * * * * * * 6241 893 * 5322 6 0 * * * * * * 8060 0 0 K 7 6526 * * 2911 * * * 2759 3239 4155 4497 5455 * 5838 4897 6741 3288 1710 * 6523 7 0 * * * * * * 8334 0 0 I 8 4866 * * * 6729 * * 1914 * 1746 2819 * * * * * * 1994 * * 8 0 * * * * * * 8390 0 0 Y 9 * * * * 1310 * * 6162 * 5067 * * * * * * * 5117 6804 957 9 20 * 6197 * * * * 8408 0 0 T 10 4313 * * 5299 6402 2979 7738 4259 * 7588 * * * 5193 * 2072 1662 3221 6488 5386 10 18 6352 * 2000 415 0 * 8391 1000 1000 R 11 4329 * * 5319 * 6783 6671 5825 1886 4071 4290 4678 * 4745 2963 4376 2612 4695 6234 4669 11 48 4921 * 2322 322 * * 8460 1827 0 N 12 4712 * 3472 3663 5446 5770 6253 5192 5099 6654 * 4170 1729 * 4066 2830 3231 6993 * * 12 36 5336 * 2336 318 * * 8460 1715 0 G 13 5525 * 4334 5422 4034 2213 * 5338 5100 5579 6560 4175 6543 6085 4447 3522 2768 6960 3447 3590 13 17 6404 * 2000 415 * * 8495 1000 0 C 14 * 135 * * 6459 * 6131 * * 6212 * 5232 * * * 5404 * * * * 14 0 * * * * * * 8495 0 0 P 15 7052 5275 * 4373 * 3458 6112 5526 5035 * * * 806 * 5601 3506 4980 4368 * * 15 0 * * * * * * 8495 0 0 Y 16 4889 * 3510 6676 3213 5397 3085 * 4864 6586 5275 6689 4546 4544 6322 * 5843 5051 3687 1664 16 0 * * * * * * 8495 0 0 C 17 5067 322 * * * * * * * * * * * * * 2929 5378 6092 * * 17 0 * * * * * * 8497 0 0 V 18 3291 5828 5621 3528 * 5882 3165 4553 2401 4896 * 3913 5236 3809 3850 5440 4354 3999 * 6486 18 0 * * * * * * 8497 0 0 W 19 2979 * 5161 4483 6418 5151 5789 5499 2080 5212 6626 4788 * 4711 2176 4915 4885 4749 5904 5035 19 0 * * * * * * 8497 0 0 A 20 1221 6692 * 5675 7641 6394 * 4333 * 2538 6070 * * 5765 * 7040 3586 2483 * * 20 15 6588 * 2000 415 * * 8497 1000 0 K 21 4817 6134 * 6520 * 6485 5044 4594 1157 4525 6329 5717 * 4934 2506 6344 5465 3632 * 6822 21 0 * * * * * * 8497 0 0 Q 22 3554 * 4286 3203 6897 * 5517 4182 3053 4057 * 3860 6899 3947 2214 3257 5850 * 6694 * 22 0 * * * * * * 8497 0 0 W 23 3538 6666 5575 4198 2475 6092 * 3158 * 1974 6347 * * 6103 6445 * 5801 4330 3826 3458 23 24 5932 * 1585 585 * * 8497 1577 0 F 24 5838 6406 * * 2574 * * 6309 * 458 5926 * * * * * * 5236 5717 * 24 0 * * * * * * 8497 0 0 E 25 3490 * 2838 2845 * * 4531 5586 2718 6529 * 3550 * 4497 2943 4640 4037 5530 * 5464 25 0 * * * * * * 8497 0 0 E 26 3581 * 4424 2080 * 4749 * * 2904 6751 6566 3633 * 4045 3750 3213 3816 6294 6511 5336 26 61 5140 6246 1594 580 * * 8497 1714 0 N 27 3431 * 6418 4115 5651 * 4302 5255 2828 2768 6568 3254 * 3648 3378 4706 5281 * 6662 3504 27 12 6886 * 2322 322 0 * 8477 1000 1000 N 28 6540 * 3943 4926 * 1315 5975 * 3632 * 6714 2707 6204 3964 4049 3935 * * * 5226 28 27 6483 7032 0 * * * 8497 1000 0 I 29 7171 * * 4974 4059 6113 * 1531 4563 2872 6301 * 5627 * 6666 6737 * 1815 * 5288 29 21 6135 * 1068 935 * 0 8479 1517 1000 A 30 4767 * 2558 2808 * 6943 6080 5495 3387 5686 * 4603 1925 5056 4161 3879 5638 6382 * * 30 15 6591 * 0 * 0 * 8479 1000 1000 F 31 6712 6029 5624 * 1820 6204 4552 4893 * 5580 * 5717 4230 * 6681 * 7040 3902 * 1307 31 27 5738 * 1059 943 * * 8497 1719 0 D 32 4013 6899 3627 2109 * 6681 6379 4654 3210 5526 6556 5665 4156 3797 4941 4648 3039 3913 * 7198 32 0 * * * * * * 8497 0 0 E 33 4227 6661 4355 2200 4398 6527 6884 3288 4310 4603 * 6862 4840 6551 6760 4009 3828 2741 6819 4180 33 0 * * * * * * 8478 0 0 T 34 7070 * * 6258 4215 * 4142 1967 3638 3698 4892 * * 6169 3735 5696 5271 2318 * 3517 34 32 * 5498 * * * * 8478 0 0 I 35 * * 2050 2283 5149 5722 6689 5860 5489 4084 * 2343 4813 5705 6646 5062 5112 3882 * 6764 35 47 * 4978 * * * 0 8506 0 2026 I 36 6401 4970 * 6493 5707 * 6157 1389 * 2338 * * 6811 * * * * 1964 6170 4231 36 108 5281 4421 1821 480 1593 581 8470 1675 3184 D 37 6135 * 1698 2570 * 3935 * 4976 4182 4124 6713 3484 * * 6348 3708 4467 4427 6431 6882 37 46 6438 5679 2000 415 2606 259 8419 1000 3870 D 38 4049 6773 2921 3115 * 6249 6518 3660 4034 3934 4892 4213 6116 * 4828 4210 3139 2751 * * 38 0 * * * * 2787 226 8427 0 4088 Y 39 4715 * 2192 4200 5189 4905 4691 3394 5254 4079 4530 3723 * 6310 3938 3963 5659 4014 * 3922 39 42 6158 6100 1585 585 1859 465 8439 1000 3858 A 40 4171 * 2557 2938 6363 4521 6551 6667 3790 3888 * 4703 2871 4010 4656 3469 4689 5503 * * 40 70 5270 5561 2175 361 1742 512 8423 1683 3385 Q 41 6498 * 2448 2236 6404 3525 4875 5621 3215 6703 5086 4560 5013 4049 6711 3849 4332 6471 * 5647 41 62 6295 5082 2807 222 * 0 8409 1000 3670 R 42 2860 6369 4138 5514 5158 2893 6234 6349 4115 4127 5650 3836 3342 4648 3208 5604 5294 5812 * 3882 42 135 4674 4326 1504 627 2130 374 8403 2313 4297 S 43 3137 * 4156 2468 6666 6436 4586 * 2819 5473 5472 5911 * 4525 2766 3509 5622 4917 * 4282 43 105 * 3833 * * 1537 610 8357 0 4766 K 44 2549 * 2779 2555 * * * 4608 3695 4927 * 3985 3682 4135 * 6729 4660 4250 4590 5560 44 77 6879 4523 1585 585 2136 373 8336 1000 4888 F 45 3824 * 4848 2375 4848 5328 4626 3922 4237 3473 3901 5234 5652 4918 3999 4929 5373 6172 3963 4358 45 76 6630 4610 0 * 3528 131 8314 1000 4977 Y 46 3649 * 6922 3237 4032 5063 6441 3895 5654 2298 3296 4401 * 3365 4479 5906 6440 4627 * 4229 46 115 * 3707 * * 1945 434 8079 0 5334 D 47 3994 * 3379 2026 5825 5625 5203 3614 3691 3751 5096 4195 6171 6407 4072 4972 4999 5620 4481 * 47 45 * 5032 * * 3576 126 8140 0 5218 E 48 3690 * 4551 2119 4325 * * 4342 3377 2836 4667 5905 * 3229 3735 4994 6204 5538 * 6650 48 260 6139 2730 4524 64 * 0 8404 1000 5419 X 49 4556 5835 5874 4301 4250 * 5614 3103 4238 2058 4636 5752 * 4926 4075 5035 4460 3426 * 3842 49 23 * 5976 * * 3802 107 8144 0 6300 N 50 2830 * 5646 4262 3827 5189 * * 4125 3235 4595 4671 4766 3396 2482 5674 6138 3565 * 5952 50 0 * * * * 1698 532 8138 0 6282 Q 51 3771 * 3008 3176 5481 4894 5927 4229 2862 3624 6306 4637 6272 3346 3589 5203 5314 4386 * * 51 33 * 5455 * * 2695 242 8131 0 5639 S 52 2990 * 5138 2926 6019 3272 6529 6167 3357 4760 4390 4610 * 4509 4219 3577 4260 4342 6418 4248 52 59 * 4647 * * 1804 487 8126 0 5334 G 53 6098 * * * 4398 2634 4111 3210 3946 2214 3609 3939 * * 4729 4388 6264 4705 * 4421 53 36 * 5349 * * 2856 214 8049 0 5255 K 54 3846 5965 5288 3693 3829 4468 6579 5446 2893 3162 * 4771 * 4126 3745 3937 4998 3213 6028 5158 54 31 * 5535 * * 2533 274 8002 0 5355 V 55 4250 * 3865 2662 6006 5298 6251 4874 2863 5504 4981 5445 4159 3513 3449 4142 6327 3543 * 5141 55 0 * * * * 1591 582 8056 0 5058 I 56 4000 * 4070 5136 4463 3615 * 3244 4343 3372 4864 4713 4282 5482 3720 5016 4282 3214 6046 4513 56 14 * 6695 * * 2507 279 8151 0 4347 F 57 4238 * 5509 * 5216 3392 6145 4511 3920 4222 6296 3786 3837 6280 6782 2630 2263 * * 3677 57 0 * * * * 1161 855 8162 0 4152 P 58 5316 * 3920 4352 * 1245 5475 5769 3970 * 6401 4158 3882 5351 4977 3670 5661 4976 6455 * 58 31 6351 6756 2000 415 * 0 8211 1000 3270 I 59 3162 5158 6836 5300 6525 4631 4231 3033 6179 6190 4948 4500 3821 3567 4970 4385 4607 3468 4118 3807 59 17 * 6419 * * 1892 453 8191 0 3451 S 60 6060 * 5249 4656 * 5272 6061 4245 4561 3957 3700 4608 3595 5253 1947 3487 3927 4293 * 5232 60 29 6433 6875 2322 322 * 0 8197 1000 3440 T 61 4268 * * 6307 * 3190 6653 5078 4267 * * 5558 * 3561 4278 2614 1516 4804 * 5145 61 38 6577 6037 0 * 566 1623 8206 1000 3616 V 62 6651 * * * 2812 * * 4316 6380 2661 6635 * * * * 4702 3675 1144 * 4380 62 0 * * * * 1549 603 8210 0 2353 P 63 * * * * * 5861 * * * * * * 25 * * * * * * * 63 0 * * * * 939 1063 8214 0 1740 Q 64 3992 6218 * * 6422 5368 6633 3916 5365 4596 5691 4357 * 2049 3782 4149 3549 2269 * 6146 64 15 6588 * 0 * * 0 8252 1000 1000 I 65 6210 * * 5867 3677 5368 * 1507 * 2816 6218 * * * * * 4299 1695 * * 65 14 6711 * 0 * 0 * 8252 1000 1000 F 66 5122 * 7155 5150 1067 * * 3907 6343 4016 6445 * * * 6505 5815 * 2375 4540 4573 66 0 * * * * * * 8243 0 0 I 67 5697 6501 5427 * 3384 * 6773 1349 * 3649 6844 5497 6595 * * * 6440 1811 * 4980 67 28 6534 6948 0 * * * 8243 1000 0 D 68 5639 6136 1710 5042 * 1726 5270 * 3765 * * 2486 * * 6464 5563 * * * 5878 68 0 * * * * 0 * 8250 0 1000 D 69 5593 * 2527 3836 * 980 * * 4658 * * 3206 * 5212 5863 5465 * * * 6167 69 16 6537 * 1000 1000 * * 8246 1000 0 E 70 4533 * 4014 2593 * 6415 4851 6081 1788 6152 * 4374 * 3541 3790 6489 3160 4840 * * 70 27 5751 * 1214 814 * * 8234 1575 0 H 71 5498 4370 * 6544 2691 * 3496 4233 6774 2701 6580 5544 6397 6175 4630 3649 6418 2820 4315 3682 71 0 * * * * * * 8214 0 0 I 72 6102 * * * 3449 * * 1581 * 3325 4772 * * 6455 * 6038 * 1491 5015 6641 72 58 4658 * 0 * * * 8214 2092 0 G 73 4968 5041 * * 4086 781 6621 4305 6607 * * 6137 * 6555 * 5280 5468 2968 * 5323 73 31 5538 * 1000 1000 * * 8152 1648 0 G 74 * * 3896 5138 * 331 6052 * * * * * * * * 4031 4924 * * * 74 0 * * * * * * 8152 0 0 F 75 3301 3617 * 4782 1888 6292 4400 * * 3500 6324 4814 5982 * * 3284 * 5003 5150 2877 75 66 5562 5392 1000 1000 * * 8150 1606 0 T 76 3449 * 1354 3821 * * * * 4818 5840 * 3196 4831 4286 * 3535 3903 4474 * * 76 113 6340 3988 1000 1000 812 1216 8111 1000 1582 E 77 4065 * 1608 1465 * * * 5108 4905 6380 * 6697 5222 3906 6101 5094 5120 * * * 77 120 5925 3984 0 * 2321 322 8065 1000 3121 L 78 * * * 3310 3466 * * 2327 * 1213 * 6049 * * * 5784 4558 3287 * * 78 141 3427 * 1252 786 1264 777 8126 3379 3949 K 79 3524 * * 3197 5108 * 4702 3146 1989 4497 3829 5374 * 2894 4671 5785 * 4608 * * 79 145 3661 5908 2322 322 640 1480 8120 2961 3127 A 80 1096 * 3477 3426 * 2980 * * 3175 4826 * 6415 * 5883 * 4905 * 6086 * * 80 110 3766 * 1895 452 628 1502 7770 2565 2033 N 81 * * * 2221 3993 6304 4529 4846 2242 4249 * 4945 * 6138 2746 3919 5852 5709 * 3845 81 29 5675 * 2322 322 0 * 7785 1000 1000 A 82 3295 5864 * 5975 3846 * * 3565 3725 1075 * * * * 4716 4399 5589 4879 * 5614 82 0 * * * * * * 7688 0 0 D 83 4874 * 1864 2154 * 3110 * 4929 3283 * * 4957 * 4850 3732 5201 5279 5642 * * 83 0 * * * * * * 7469 0 0 K 84 4510 * * 2111 * 3697 * * 1347 4785 5623 5985 4676 4683 4258 4270 * * * * 84 0 * * * * * * 7370 0 0 I 85 5692 * * 5422 * * * 2615 * 793 4557 4052 * * * * 5137 3546 * * 85 0 * * * * * * 7305 0 0 L 86 * * * * 4859 * * 2004 * 843 4819 * * * * * * 3407 * 5095 86 0 * * * * * * 6690 0 0 N 87 * * 3264 1645 * * * * 4381 3177 * 2141 * * 4447 3985 4834 4416 * * 87 0 * * * * * * 6257 0 0 K 88 * * * 2482 4652 4587 * * 1329 * * * 4132 4230 2757 4364 * 4844 * * 88 0 * * * * * * 5871 0 0 K 89 * * * 3613 * * * * 432 * * * * 2497 * * * * * * 89 0 * * 0 * * * 4492 0 0 //