HHsearch 1.5 NAME c2l5uA_ FAM FILE c2l5uA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2l5uA_.a3m DATE Sat Jan 22 08:41:26 2011 LENG 61 match states, 61 columns in multiple alignment FILT 107 out of 1258 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.9 EVD 0.5212 1.6284 SEQ >ss_dssp CCCSCCSSCCCSSCTTTSCCSSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGGSCC >sa_dssp CECEEDECEBCDDACEDEECDEBBBABDBDCAACCECCDEECEEDCEDEBDBCDCEEDDEE >ss_pred CCCCCCCCCCCCEEEEECCCCCEEEECCCCCEEEEEEECCCCCCCCCCCEECCCHHCCCCC >ss_conf 9877652688576224139882999848976344101078877888776645322102779 >Consensus gpxxxxexxxxxxCxxCxxxgxxvxCdxCxxxxHxxCxxxxxxxxxxxxwxCxxCxxkxxx >c2l5uA_ GPLGSYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQ >UniRef50_A9RXS5(445-508:1437) Cluster: SNF2 family DNA-dependent ATPase domain-containing protein; n=1; Physcomitrella patens subsp. patens|Rep: SNF2 family DNA-dependent ATPase domain-containing protein - Physcomitrella patens subsp. patens E=3e-09 s/c=0.97 id=27% cov=97% GPFNKDQDGHEDECRWCGQGGDVLCCESCDKVFCCPCIKRNLGEegldqiVNSSDWKCFFCNKQ--- >UniRef50_Q9W1A9(240-297:2291) Cluster: CG11290-PA; n=5; Fungi/Metazoa group|Rep: CG11290-PA - Drosophila melanogaster (Fruit fly) E=1e-06 s/c=0.92 id=27% cov=92% -----WDCQNCADCAVCKMRNRgpcLLQCFVCKDHFHLTCLDTIPDKKPKHPYRCKTCSKQGF- >UniRef50_A5DDB7(86-140:752) Cluster: Transcription factor BYE1; n=1; Pichia guilliermondii|Rep: Transcription factor BYE1 - Pichia guilliermondii (Yeast) (Candida guilliermondii) E=2e-06 s/c=0.96 id=26% cov=89% -PCGANKDNYDEETD---EGGTMIECDKCHTWQHAKCMGYRNERSIPKKYMCNLCQE---- >UniRef50_A5DML1(32-93:360) Cluster: Putative uncharacterized protein; n=1; Pichia guilliermondii|Rep: Putative uncharacterized protein - Pichia guilliermondii (Yeast) (Candida guilliermondii) E=0.0004 s/c=0.73 id=19% cov=93% ----KFNLNSEEVYCICRRPDhggeLMISCDGCEEWFHFRCMKLdPELSRLIARFFCKFCEWKGV- >UniRef50_A8Q9Y5(231-289:519) Cluster: Goliath protein, putative; n=1; Brugia malayi|Rep: Goliath protein, putative - Brugia malayi (Filarial nematode worm) E=0.0004 s/c=0.77 id=26% cov=93% -PIRVGDKELDTDCPVCIDPyraGDIIRSLPCRHIFHKTCVDPWLL----EHRTCPMCKSDILK >UniRef50_A9V540(142-208:211) Cluster: Predicted protein; n=1; Monosiga brevicollis|Rep: Predicted protein - Monosiga brevicollis (Choanoflagellate) E=0.0007 s/c=0.66 id=26% cov=100% GAQDAEEEEGDKYCiEGCTGTGEMVGCDNPDCpgqWFHYTCVGLTGPPDTK-KWYVsqiPSSKPKGQK >UniRef50_UPI000069FE1E(1-50:453) Cluster: UPI000069FE1E related cluster; n=1; Xenopus tropicalis|Rep: UPI000069FE1E UniRef100 entry - Xenopus tropicalis E=0.0008 s/c=0.88 id=20% cov=84% ------EIKEELNCSICREIYTDPVTLPCAHSFCWSCIRQFWDKQEDKEWFCPECR----- >UniRef50_A8NLE9(1240-1311:1603) Cluster: SET domain containing protein; n=1; Brugia malayi|Rep: SET domain containing protein - Brugia malayi (Filarial nematode worm) E=0.0008 s/c=0.61 id=27% cov=97% -PVGSYDHDSFSYlgvadantdCvrCICGttdDDGPMIQCEKCNFWLHEECVFDEKPLDEVKDFICIICVRNA-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 2540 * * * * 272 * * * * * * * * * * * * * * 1 0 * * * * * * 4133 0 0 P 2 3845 * 3254 3249 * * * * * * * * 599 * * * * * * 4052 2 0 * * * * * * 5298 0 0 L 3 3750 4597 4554 2675 4495 * * 4398 * 1637 * * * 3262 * * 3743 3425 * * 3 0 * * * * * * 5692 0 0 G 4 4717 * 2057 3989 * 1358 * * * * * 4801 * 4817 3818 3388 * * 5027 * 4 0 * * * * * * 6040 0 0 S 5 3457 * 5382 3441 * 5196 * * 1658 5388 * * 5008 5361 * 1977 * 3115 * * 5 0 * * * * * * 6380 0 0 Y 6 * * 4545 1675 2988 3614 * 4330 * * * 4630 5666 5482 * 4531 4763 5420 3129 3533 6 31 5547 * 0 * * * 6565 1000 0 E 7 * * 1939 1068 5658 * 5922 * 4933 * * 6238 * 3987 5655 4579 4733 5818 * * 7 0 * * * * * * 6915 0 0 T 8 4578 4490 2204 2481 * 5337 4630 3465 5844 4863 * 4325 5313 5338 * 3728 5003 4059 * 4523 8 0 * * * * * * 7064 0 0 D 9 5780 * 2289 1853 * 3296 6351 * 4763 * 5962 3506 4206 6102 * 3737 4184 4422 * * 9 13 6801 * 2807 222 * * 7062 1000 0 H 10 4741 * 3222 2644 * 3782 3502 5902 * 6020 * 2331 * 4823 6690 3114 4933 * 4019 4358 10 14 6690 * 0 * * * 7095 1000 0 Q 11 4754 3712 2080 1973 4736 4940 6317 * 6306 5488 * 5144 4711 3496 * 4004 5436 4743 * * 11 0 * * * * * * 7095 0 0 D 12 3570 * 2247 3254 4844 4588 * 5481 3134 3583 6052 4521 4652 4947 6695 4167 4135 5008 * 5642 12 49 4917 * 1209 818 * * 7239 1969 0 Y 13 5199 6933 4311 4898 3681 * 5327 3529 * 3284 * 4651 * 5133 3481 6027 5605 2517 5025 2402 13 54 4763 * 2623 256 * * 7181 2345 0 C 14 * 138 5668 * 6206 * * * * 6727 * * * 6483 * * 6340 * * 5333 14 149 3961 4891 419 1988 * * 7147 2412 0 E 15 3539 3442 4133 3606 4256 3565 4505 6469 3734 6147 6919 6343 5574 4208 3733 3245 5523 4069 * 4518 15 42 * 5114 * * 0 * 7134 0 2443 V 16 3911 * * 3899 6713 4475 * 2109 3126 4087 5933 * 6518 4950 * 5530 5058 1874 5468 * 16 0 * * * * 0 * 7154 0 1947 C 17 * 145 * 5438 * 5688 * 6425 6405 * * * 5848 * * * 6317 * * * 17 89 4061 * 2314 324 * * 7147 3296 0 Q 18 5065 5570 4020 5968 6321 1861 4711 6255 3241 5313 * 4411 * 3815 2791 4885 4260 5536 * 4999 18 151 3327 * 1743 512 * * 7147 4134 0 Q 19 5753 * 2024 3504 * 4035 6251 * 3191 4857 5495 3731 * 3673 2869 4671 4212 * * 5428 19 147 3368 * 1805 487 * * 7164 4203 0 G 20 5926 * 2851 4017 * 2426 4877 5294 3854 7123 6639 6434 2637 7075 4719 3225 4408 6376 4816 4974 20 113 3959 6490 2015 410 * * 7164 3210 0 G 21 4779 5319 2702 4041 * 1149 6636 * * * 6537 2997 * 5369 5081 5244 6558 6565 * 5279 21 185 3055 * 1804 487 * 0 7150 4468 1000 E 22 5869 6520 2022 2497 5894 6323 * * 3524 4168 * 3589 5247 3942 3857 4537 4336 4927 * 6999 22 214 2858 * 1993 417 * 0 7151 4827 1000 I 23 * 6260 4971 5622 5810 * * 4135 6493 1682 1750 * * 6693 * 5120 4262 3170 4974 7234 23 23 6007 * 1654 552 0 * 7151 1640 1000 I 24 5456 6192 * 5442 6737 * * 2300 5836 1792 5934 * 5845 5237 6461 * 5064 1694 * 6476 24 0 * * * * * * 7164 0 0 L 25 5121 3210 * 4756 4663 3441 4799 4468 4963 3156 4904 6086 4955 3059 3933 4051 6769 3480 6541 4891 25 10 7155 * 1585 585 * * 7164 1000 0 C 26 * 102 * * * * * 6433 6327 * * * * * * 6265 5845 6192 * * 26 41 5600 7016 1000 1000 * * 7164 1368 0 D 27 7025 6522 1122 2644 6595 4165 4727 * 5011 3721 * 5275 * 6007 * 3873 5093 6329 * * 27 41 5174 * 1586 584 * 0 7164 2135 1000 T 28 5150 6688 4676 4594 5162 2967 4734 6785 4100 5031 6618 3372 4559 3372 4327 2792 3300 5003 * 5839 28 22 6037 * 555 1646 0 * 7164 1647 1000 C 29 * 65 6122 * * * * * * * * * 5076 * * * * * * * 29 11 6993 * 0 * * * 7164 1000 0 P 30 4692 4596 2322 3871 6847 3830 6019 * 3166 5479 * 3016 3207 5869 3475 3822 6200 * * * 30 0 * * * * * * 7164 0 0 R 31 4012 3535 4400 3643 6716 6013 3600 4086 3318 4348 * 3539 * 4891 2767 5242 4120 4324 * 6941 31 76 4290 * 1454 655 * * 7164 1844 0 A 32 2575 5120 * 6426 5450 3535 5796 4888 * 4789 6335 5452 5806 * * 2924 5582 3941 1627 * 32 7 7657 * 0 * * * 7164 1000 0 Y 33 5602 * * 6062 1449 * * 5739 * 4833 6013 * * 3532 6577 * * 4077 4564 1598 33 17 6385 * 0 * * * 7164 1000 0 H 34 * 3722 * * * * 114 * * * * * * * * * * * * * 34 0 * * * * * * 7164 0 0 M 35 4075 4986 4226 5726 3923 5359 6760 3129 5347 2838 5060 * 4366 3695 4825 6327 4071 3530 4471 3967 35 0 * * * * * * 7164 0 0 V 36 5095 * 2974 3334 5621 3939 5707 5547 3032 5163 * 6504 5811 4966 3964 3068 3434 4129 6864 3929 36 0 * * * * * * 7164 0 0 C 37 * 27 * * * * * * * * * * * * * * 5727 * * * 37 66 5571 5391 527 1709 * * 7164 1632 0 L 38 4258 6001 6591 6326 5646 * 3211 3762 * 2119 3414 * * 6711 6988 * 5906 1667 * 4855 38 20 7064 7390 0 * 1533 612 7149 1000 2026 D 39 * * 2290 4613 5638 1945 5504 5777 2981 6738 * 3973 5323 6317 3628 5067 4873 4549 * 6649 39 122 5298 4170 1439 664 0 * 7161 2111 2196 P 40 5944 * 4482 5229 6961 6954 5734 3033 4305 3023 5690 6741 1534 5813 4525 6427 5789 3657 * 4735 40 93 4484 5820 2016 410 1435 666 7136 2836 2970 D 41 4082 * 4612 4064 4877 3197 5572 5855 4338 4061 5994 3793 2728 4447 6578 4090 3161 6830 4027 6169 41 47 * 4968 * * 0 * 7132 0 3176 M 42 4216 7065 4645 3757 4404 4245 5738 3525 4493 2050 4266 5041 5142 5449 6990 6369 5057 3104 5270 7053 42 108 4220 5762 3425 141 0 * 7140 2788 2105 E 43 3771 * 2412 3027 * 6589 6403 * 2884 3929 5320 5132 4160 5088 4678 3309 3528 5759 * 6821 43 69 5493 5338 666 1436 0 * 7140 1898 1000 K 44 3377 5835 3870 2992 5622 4656 * 6046 3168 4614 6602 3845 3305 6681 3562 3446 3498 * * 6772 44 67 5620 5305 2372 310 * 0 7138 1668 1316 A 45 3802 * 3199 4496 5277 6648 6940 3100 3036 4205 6318 6745 4606 4299 5195 3766 4151 2673 6536 * 45 91 4032 * 2001 415 2091 386 7124 3440 2672 P 46 4883 6353 4144 3045 * * 6796 4500 4722 3979 * 4285 1425 5529 * 3223 4061 6763 * * 46 24 5916 * 541 1677 729 1333 7132 1633 2361 E 47 4034 * 3275 3077 5056 4868 5929 4709 2638 5783 6976 3963 4373 6114 4175 3014 3753 5734 * 6320 47 163 5290 3621 1436 666 0 * 7138 1555 1316 G 48 4171 6364 2487 2811 6575 2231 4187 6595 3462 6860 * 4853 * 5406 4237 4218 4879 6013 * 6790 48 67 4453 * 993 1007 696 1385 7089 2508 2934 K 49 4951 6681 3273 2783 * 5098 4456 5248 2583 7003 5712 4059 3265 4840 4513 3588 5305 4181 * 6970 49 115 3860 6991 1758 506 * 0 7128 3612 1616 W 50 * * * * 2839 * 5606 6523 * 4609 * * * 6427 5051 * * * 772 2639 50 10 7123 * 2322 322 1578 588 7128 1000 2062 S 51 6379 6184 * 5358 2522 * 4142 3344 4062 3806 5141 5250 * 5400 3737 5426 4341 3938 6455 2421 51 47 4964 * 1570 592 0 * 7151 2230 1614 C 52 * 43 * * * * * * * * * * * * * * * 5076 * * 52 53 4783 * 1314 742 * * 7164 1600 0 P 53 4482 * 4070 3564 5163 5900 6385 5726 3989 5421 5206 6962 1568 5537 3483 3977 6811 3951 * 5111 53 0 * * * * * * 7164 0 0 H 54 4721 5342 3820 3842 3705 5770 5956 4588 4297 4031 3684 4406 4532 4388 3920 3769 3534 3851 * 5567 54 0 * * * * * * 7164 0 0 C 55 * 86 * * * * 5838 * * * * * * * * 4632 * * * * 55 0 * * * * * * 7159 0 0 E 56 5961 * 4457 4842 4988 5461 6620 5206 2549 3662 * 6235 * 3036 2484 4915 2970 3680 * 6716 56 0 * * * * * * 7182 0 0 K 57 4502 * 5747 3031 * 4020 6020 5379 3016 6349 4785 4799 2412 3780 2744 3971 * 6207 5765 * 57 0 * * * * * * 7114 0 0 E 58 * 6017 4566 2916 * * 4550 * 1488 * * 3440 * 2709 3990 5626 3601 * * * 58 0 * * * * * * 7001 0 0 G 59 3513 * 2978 * * 1671 * 4265 4270 * * 4470 * 2522 4387 3312 * * * * 59 0 * * * * * * 6494 0 0 I 60 * * * * 3531 * * 2533 5085 1456 4683 * * 4168 * * 4466 2272 * * 60 0 * * * * * * 5506 0 0 Q 61 * * * * * * * * 813 * * * * 1545 3503 * * * * * 61 0 * * 0 * * * 4422 0 0 //