HHsearch 1.5 NAME c2kk9A_ FAM FILE c2kk9A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c2kk9A_.a3m DATE Sat Aug 28 18:34:19 2010 LENG 55 match states, 55 columns in multiple alignment FILT 12 out of 16 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.7 EVD 0.4929 1.3558 SEQ >ss_dssp CCCCSSSSCCSHHHHHHHHHHHHHHHHHHHHHHCSSSSSSSTTSSSTTTTSCSCC >sa_dssp EEEEEEEEEBEEDDEEEDDEEEEEEEEEEEEEDDEDDEEEEDDEDDDEEEEEEEE >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 9414556765999999999999999998799999998665457769999984409 >Consensus kxlxRDLeAsRxAKKxxEAexxKxxexnqiseasrxxlxrDLxAsReAKKxveka >c2kk9A_ KGLRRDLDASREAKKQLEAEQQKLEEQNKISEASRKGLRRDLDASREAKKQVEKA >UniRef50_P50469(138-197:372) M protein, serotype 2.2 n=36 Tax=Streptococcus pyogenes RepID=M22_STRPY E=3e-10 s/c=1.10 id=70% cov=98% KGLSRDLEASRTAKKELEAKHQKLEAENKkltegnqVSEASRKGLSNDLEASRAAKKELE-- >UniRef50_Q9AMC0(177-235:308) Emmd432 (Fragment) n=47 Tax=Streptococcus RepID=Q9AMC0_STRPY E=2e-07 s/c=0.96 id=68% cov=96% -GLRRDLDASREAKKQVEkdlanltAELDKVKEENKSQTQAVKVFARDLDASREAKKKVE-- >UniRef50_B8YGH5(283-335:442) M protein (Fragment) n=6 Tax=Streptococcus RepID=B8YGH5_STRSG E=1e-06 s/c=1.02 id=89% cov=98% QSLRRDLDASREAKKQLEAEYQKLEEQNKISEASRKGLRRDLNASREAKKQLE-- >UniRef50_P50468(235-287:407) M protein, serotype 2.1 n=192 Tax=Streptococcus RepID=M21_STRPY E=2e-06 s/c=1.01 id=72% cov=98% QGLSRDLEASRAAKKDLEAEHQKLKEEKQISEASRQGLSRDLEASREAKKKVE-- >UniRef50_P50468(165-217:407) M protein, serotype 2.1 n=192 Tax=Streptococcus RepID=M21_STRPY E=1e-05 s/c=0.95 id=72% cov=98% KSLRRDLEASRAAKKDLEAEHQKLKEEKQISEASRKSLRRDLEASRAAKKDLE-- >UniRef50_Q54843(329-390:528) Emm64 protein n=9 Tax=Streptococcus RepID=Q54843_STRPY E=9e-06 s/c=0.83 id=77% cov=102% QGLRRDLNASREAKKQVEkdlanltAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKA >UniRef50_Q8GL88(137-196:236) M protein (Fragment) n=9 Tax=Streptococcus pyogenes RepID=Q8GL88_STRPY E=0.0005 s/c=0.76 id=70% cov=98% KSLSRDLEASRAAKKELEAnhqkletEHQKLKEDKQISDASRQGLSRDLEASREAKKKVE-- >UniRef50_Q19KW6(212-264:423) M protein (Fragment) n=13 Tax=Streptococcus RepID=Q19KW6_STREQ E=3e-06 s/c=1.00 id=80% cov=98% QSLRRDLDASREAKKQLEAEYQKLEEEKQISDASRQSLRRDLDASREAKKQLE-- >UniRef50_Q55105(261-313:439) Multiple ligand-binding protein 1 n=1 Tax=Streptococcus sp. RepID=Q55105_STRSP E=3e-06 s/c=1.00 id=54% cov=98% KRTNRDLEAARDAKKATEAELAKANELNQILEASRTRTNRDLEAARDAKKAVD-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * * * * * * 805 * * * * 1226 * * * * * * 1 0 * * * * * * 1620 0 0 G 2 * * * * * 1121 * * * * * * * * 2502 1460 * * * * 2 0 * * * * * * 1709 0 0 L 3 * * * * * * * * * 280 * * * * * * 2502 * * * 3 0 * * * * * * 1709 0 0 R 4 * * * * * * * * * * * 2502 * * 822 1957 * * * * 4 0 * * * * * * 1709 0 0 R 5 * * * * * * * * * * * * * * 0 * * * * * 5 0 * * * * * * 1720 0 0 D 6 * * 0 * * * * * * * * * * * * * * * * * 6 0 * * * * * * 1720 0 0 L 7 * * * * * * * * * 0 * * * * * * * * * * 7 0 * * * * * * 1720 0 0 D 8 * * 1368 895 * * * * * * * 3739 * * * * * * * * 8 0 * * * * * * 1720 0 0 A 9 0 * * * * * * * * * * * * * * * * * * * 9 0 * * * * * * 1720 0 0 S 10 2163 * * * * * * * * * * * * * * 365 * * * * 10 0 * * * * * * 1720 0 0 R 11 * * * * * * * * * * * * * * 0 * * * * * 11 0 * * * * * * 1720 0 0 E 12 2269 * 2163 1113 * * * * * * * * * * * * 3227 * * * 12 0 * * * * * * 1720 0 0 A 13 0 * * * * * * * * * * * * * * * * * * * 13 0 * * * * * * 1720 0 0 K 14 * * * * * * * * 0 * * * * * * * * * * * 14 0 * * * * * * 1720 0 0 K 15 * * * * * * * * 0 * * * * * * * * * * * 15 0 * * * * * * 1720 0 0 Q 16 2163 * 2875 2490 * * * * * * * * * 1113 * * * * * * 16 0 * * * * * * 1720 0 0 L 17 * * * * * * * * * 796 * * * * * * 2163 2316 * * 17 0 * * * * * * 1720 0 0 E 18 * * * 0 * * * * * * * * * * * * * * * * 18 323 2316 * 2807 222 * * 1720 1199 0 A 19 0 * * * * * * * * * * * * * * * * * * * 19 107 3811 * 2807 222 * * 1720 1000 0 E 20 * * * 163 * * * * 3227 * * * * * * * * * * * 20 0 * * * * * * 1720 0 0 Q 21 * * * * * * 1409 * * 1237 * * * 3938 * * * * * 2899 21 0 * * * * * * 1720 0 0 Q 22 2163 * 2316 * * * * * * * * * * 796 * * * * * * 22 0 * * * * * * 1720 0 0 K 23 * * * * * * * * 0 * * * * * * * * * * * 23 0 * * * * * * 1720 0 0 L 24 2163 * * * * * * * * 796 * * * * * * * 2316 * * 24 0 * * * * * * 1720 0 0 E 25 * * * 1441 * * * * 1292 * * 2163 * * * * * * * * 25 0 * * * * * * 1720 0 0 E 26 3227 * * 163 * * * * * * * * * * * * * * * * 26 0 * * * * * * 1720 0 0 Q 27 * * 3811 974 * * * * * 2984 * * * 1770 * * * * * * 27 0 * * * * * * 1720 0 0 N 28 * * * * * * * * 1524 * * 616 * * * * * * * * 28 0 * * * * * * 1720 0 0 K 29 * * * * * * * * 1221 * * * * 808 * * * * * * 29 163 3227 * 2807 222 * * 1720 1000 0 I 30 * * * * * * * 382 * * * * * * * 2989 * 3227 * * 30 0 * * * * * * 1720 0 0 S 31 * * * * * * * * * 2163 * * * 2989 * 620 * * * * 31 0 * * * * * * 1720 0 0 E 32 * * 2242 594 * * * * * * * * * * * * 2989 * * * 32 0 * * * * * * 1720 0 0 A 33 194 * * * * * * * * * * * * 2989 * * * * * * 33 0 * * * * * * 1720 0 0 S 34 2989 * * * * * * * * * * * * * * 194 * * * * 34 0 * * * * * * 1720 0 0 R 35 * * * * * * * * * * * * * * 194 * * 2989 * * 35 0 * * * * * * 1720 0 0 K 36 * * * * * * * * 1194 * * * * 1558 * * 2163 * * * 36 0 * * * * * * 1720 0 0 G 37 * * * * * 1143 * * * * * * * * 2163 2338 * 2989 * * 37 0 * * * * * * 1720 0 0 L 38 * * * * 2989 * * * * 620 * * * * * * 2163 * * * 38 0 * * * * * * 1720 0 0 R 39 2989 * * * * * * * * * * 2163 * * 1298 2035 * * * * 39 0 * * * * * * 1720 0 0 R 40 * * * * * * * * * * * 3227 * * 163 * * * * * 40 0 * * * * * * 1720 0 0 D 41 * * 0 * * * * * * * * * * * * * * * * * 41 0 * * * * * * 1720 0 0 L 42 * * * * * * * * * 0 * * * * * * * * * * 42 0 * * * * * * 1720 0 0 D 43 * * 1028 1182 * * * * * * * 3860 * * * * * * * * 43 0 * * * * * * 1720 0 0 A 44 0 * * * * * * * * * * * * * * * * * * * 44 0 * * * * * * 1720 0 0 S 45 2163 * * * * * * * * * * * * * * 365 * * * * 45 0 * * * * * * 1720 0 0 R 46 * * * * * * * * * * * * * * 0 * * * * * 46 0 * * * * * * 1720 0 0 E 47 2497 * 2163 738 * * * * * * * * * * * * * * * * 47 0 * * * * * * 1720 0 0 A 48 0 * * * * * * * * * * * * * * * * * * * 48 0 * * * * * * 1720 0 0 K 49 * * * * * * * * 0 * * * * * * * * * * * 49 0 * * * * * * 1720 0 0 K 50 * * * * * * * * 0 * * * * * * * * * * * 50 0 * * * * * * 1720 0 0 Q 51 2163 * 3829 3227 * * * * 1926 * * * * 1572 * * * * * * 51 0 * * * * * * 1720 0 0 V 52 * * * * * * * * * 1684 * * * * * * 3367 757 * * 52 0 * * * * * * 1720 0 0 E 53 * * 2984 195 * * * * * * * * * * * * * * * * 53 0 * * * * * * 1720 0 0 K 54 * * * * * * * * 0 * * * * * * * * * * * 54 0 * * * * * * 1188 0 0 A 55 0 * * * * * * * * * * * * * * * * * * * 55 0 * * 0 * * * 1188 0 0 //