HHsearch 1.5 NAME c1zeqX_ FAM FILE c1zeqX_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c1zeqX_.a3m DATE Wed Mar 10 07:06:20 2010 LENG 84 match states, 84 columns in multiple alignment FILT 105 out of 177 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.3 EVD 0.4336 0.3236 SEQ >ss_dssp CCCCCCCCCCEEEEEEEEEEEETTTTEEEEEECCBGGGTBCSEEEEEECCTTCBCCCCCTTCEEEEEEEEETTEEEEEEEEECC >sa_dssp EEEEEEEECEEBEBCADAECDDEEDDCACADADEBEECECEECDCEABBCEEBEDDEBEEECDACACABDDEEDBCADCBEECE >ss_pred CCCCCCCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCHHHHHCCCCCCEEEEEEEEECCCEEEEEEEECC >ss_conf 987676766049999999998378988999802402288986068875288558601899987999999918948999998548 >Consensus mxxxsxaxxxxxxxxGxVxxvdxxxxxitixHxxIxxlxwPaMTMxFxvxxxxxlxxlkxGdxVxFxxxxxxgxxxIxxixxaq >c1zeqX_ METMSEAQPQVISATGVVKGIDLESKKITIHHDPIAAVNWPEMTMRFTITPQTKMSEIKTGDKVAFNFVQQGNLSLLQDIKVSQ >UniRef50_A4SQ07(395-474:511) Heavy metal efflux system periplasmic protein n=2 Tax=Aeromonas RepID=A4SQ07_AERS4 E=6e-19 s/c=1.19 id=26% cov=96% FQRMTAVRPAQVWTQGTVQSMDLASRTLMVAHPPIPEWQWPAMEMEFTVAEGVDISKLAEGQTLHLQVIQEGDEYRITTI---- >UniRef50_B1YYV3(39-121:122) Efflux transporter, RND family, MFP subunit n=13 Tax=Burkholderia RepID=B1YYV3_BURA4 E=4e-11 s/c=0.83 id=24% cov=100% MSSGGAAESGTALTDAEVKKVDAASGKITLKHGALENVDMPSMTMAFKAKDAAMLAGVHAGDKVRVRVERVNGTLTIVKLEKA- >UniRef50_C4LFQ8(20-89:102) RND family efflux transporter MFP subunit n=3 Tax=Tolumonas auensis DSM 9187 RepID=C4LFQ8_TOLAT E=9e-10 s/c=0.92 id=25% cov=77% ----SQASVNTYMAHGSVVAVDAAAQEITVQQNAVTELGWPARTFTYTAAGSNVLKDIAVGQTVDVKF---------------- >UniRef50_Q0AMC0(35-111:116) Putative uncharacterized protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0AMC0_MARMM E=2e-06 s/c=0.69 id=18% cov=93% ----AEAMAQSI-VSADVRTVDTEARTTLLRHEAMPELGMGAMVMPFAIDDGVDIALFQPGAALMVTVTRRDGELVVIAAEV-- >UniRef50_B9XT57(42-119:289) Electron transport protein SCO1/SenC (Fragment) n=1 Tax=bacterium Ellin514 RepID=B9XT57_9BACT E=3e-14 s/c=1.02 id=22% cov=94% --TSAQAGTTNYYVRGVLKAVKPGEHQLVIAHEDIPNF-MEAMTMPFRVKDPAILTNVAIGEKITFQLHVTETESWVDHIQ--- >UniRef50_B7J6W8(37-117:120) Heavy metal efflux system protein, putative n=6 Tax=Acidithiobacillus ferrooxidans RepID=B7J6W8_ACIF2 E=6e-14 s/c=0.97 id=22% cov=90% -----ATKAQTFMGQGKINSINPDANTANVAMGPVKALGWPSMSMNFLLQNTAMLNGLKTGEIVNFVFAKDtAGGYVITRI---- >UniRef50_A4A7T9(46-126:143) Secreted protein n=2 Tax=Congregibacter litoralis KT71 RepID=A4A7T9_9GAMM E=4e-08 s/c=0.73 id=24% cov=79% -HGAQAMEESVGYATGVIRSVGDQGNTLTIDHGPFKgDIEMDAMTMRYGVSKDVDVLAFTENTEVAF------------------ >UniRef50_B9R4S0(401-473:731) Efflux transporter, RND family, MFP subunit, putative n=8 Tax=Rhodobacteraceae RepID=B9R4S0_9RHOB E=2e-11 s/c=0.96 id=25% cov=81% --RMAPTDEDPARGTGELIALNRATRMATIRHDALESLDWPAMTSTFPVQAGMSLDRLTGGQSVAFRAV--------------- >UniRef50_Q1N1F5(395-479:508) Putative cation efflux system protein n=1 Tax=Bermanella marisrubri RepID=Q1N1F5_9GAMM E=2e-12 s/c=0.86 id=22% cov=99% IDRGSATRLPNASVMGKVNYVDAKNSVINISRAAIEKWNRPAATMDFVLDPSipnKLINGLHKSQSIHFMFVIDDDEFYVTEIHP-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * 3121 * * 3915 * * 288 * * * * * * * * * 1 0 * * * * * * 4485 0 0 E 2 3644 * 3599 1862 * * 2309 * 4138 * * 5098 * 2222 * 4057 * * * * 2 0 * * * * * * 4817 0 0 T 3 3600 * 4304 * * 3022 * * 5361 * 4571 5655 4520 4518 2206 3320 1980 * * * 3 0 * * * * * * 5037 0 0 M 4 2640 * * 3676 * 4097 5352 * 5344 * 1312 * * 4324 * 4024 3693 4004 * * 4 0 * * * * * * 5187 0 0 S 5 1953 * 5941 * * 4854 * * 4309 * * 4494 4538 4379 4563 1674 2745 * * * 5 61 6126 5214 1000 1000 * * 5261 1000 0 E 6 2051 * 5325 3396 * 4270 4729 * * 5013 5807 * 2830 3091 * 2399 4243 * * * 6 20 * 6185 * * 0 * 5312 0 1000 A 7 791 * 6206 4541 * * * 4843 5938 * 4836 5539 * * * 4171 3285 3324 * * 7 21 6128 * 2000 415 0 * 5379 1000 1000 Q 8 2830 * 3257 3029 * 5018 6367 * 3879 * 4125 5697 3940 2651 4565 3596 3946 * 5844 6247 8 37 5314 * 1657 550 * * 5335 1424 0 P 9 1510 * 5775 4048 * 5359 * * 5965 4353 5748 * 2739 4710 * 3039 3657 3771 * * 9 119 4646 4668 1411 680 * * 5332 2126 0 Q 10 2691 * 4249 3982 * 5186 5011 * 3424 * * 3824 3480 2298 3976 3875 4052 5505 * * 10 20 6202 * 0 * 566 1624 5398 1000 2142 V 11 4446 * 5585 4988 5090 5095 * 5165 * 6294 5137 4406 4089 3472 3209 3130 2206 2848 * * 11 0 * * * * * 0 5413 0 1000 I 12 1745 * 6359 * 4766 3881 4666 3014 6330 6376 6683 * * * * * * 3081 6417 1957 12 73 5597 5124 0 * 0 * 5458 1558 1000 S 13 4906 * 5833 4090 * 6875 3809 * 4217 4419 3428 6138 3666 3464 3907 3268 3643 6111 2816 5237 13 0 * * * * 963 1038 5320 0 1459 A 14 2097 * * * * 2311 * 5874 * 5586 5854 * * * * 3366 2478 2102 * * 14 0 * * * * * 0 5315 0 1000 T 15 4660 * 3633 2812 * * 5047 * 3804 * 5352 4641 * 2830 3092 3955 2410 4047 * * 15 0 * * * * 0 * 5301 0 1000 G 16 2659 * * * * 277 * * * * * * * * * 5930 * * * * 16 0 * * * * * * 5403 0 0 V 17 5004 * 6295 2574 7122 * 5896 4942 3909 5590 * * * 3695 3584 5582 2621 1735 * * 17 0 * * * * * * 5403 0 0 V 18 * * * * * * * 1500 * 4202 * * * * * * * 805 * 5666 18 7 * 7717 * * * * 5403 0 0 K 19 * * 5259 3614 * * 5663 4562 2166 4757 * 2706 * 5988 3120 7243 3219 2538 * * 19 0 * * * * * 0 5408 0 1000 G 20 1652 * 6536 4061 * 3758 6903 * 2561 * * * * 5019 4462 2356 3959 6788 * 6111 20 15 * 6616 * * 0 * 5408 0 1000 I 21 5692 * * * 5633 * * 1819 * 3146 4690 * 5653 * * * 7141 1094 5062 * 21 72 5621 5137 2209 352 0 * 5399 1471 1000 D 22 6381 * 653 4857 * 4514 * * 4915 6090 5075 2858 6790 6471 6595 6795 5736 * * * 22 52 * 4826 * * 1450 658 5390 0 1881 L 23 2114 * 5013 6601 6913 6352 4904 * 4647 3192 * * 2117 5017 4050 5101 3281 3824 * * 23 0 * * * * 1569 593 5374 0 2571 E 24 2323 * 3009 2652 * 3690 5663 6045 3171 5355 5334 * 4177 3680 6225 3919 5482 6789 * * 24 25 * 5844 * * 0 * 5385 0 2153 S 25 1665 * 4779 4773 * 3135 4143 * 4695 7080 6684 3316 4979 4384 4916 3362 3906 * 6913 * 25 69 6599 4779 3322 152 * 0 5407 1000 1504 K 26 3846 * 6349 * * 1704 3966 * 3726 * * 3089 * 4138 2204 4562 4720 * * * 26 0 * * * * 1600 577 5395 0 2546 K 27 5169 * * 4668 6385 6043 6517 7194 2082 5583 4354 * * 3683 4065 3330 1690 4832 * * 27 0 * * * * 0 * 5393 0 2267 I 28 3350 * * * 5717 * * 1565 * 2138 6199 * * * * * 6295 1779 * * 28 0 * * * * * * 5403 0 0 T 29 6708 * 6939 4992 6529 6028 * 6838 4376 4276 6816 2764 * 6645 6620 5949 902 3495 * * 29 0 * * * * * * 5403 0 0 I 30 5717 * * * 6884 * * 1151 * 1553 4666 * * * * * * 2818 * * 30 0 * * * * * * 5403 0 0 H 31 2500 * 3837 4415 * * 4862 * 3009 6462 * 3981 * 3361 3622 2285 3894 5505 * * 31 0 * * * * * * 5403 0 0 H 32 5987 5717 * * * * 218 * * * 6567 * * 5582 4140 5847 * * * * 32 0 * * * * * * 5403 0 0 D 33 3414 * 3175 2111 * 1622 * * 5645 * * 5063 3946 3675 6199 5648 * 6332 * * 33 0 * * * * * * 5403 0 0 P 34 1729 * 4912 2975 * 5843 * * 5987 * * * 1110 6963 5259 * * 7082 * * 34 0 * * * * * * 5403 0 0 I 35 5896 * * * 6394 * * 509 * 3923 4846 6377 * * * * * 2683 * * 35 16 6462 * 2000 415 * * 5403 1000 0 A 36 3112 * 3879 3400 * 5987 * * 2885 * * * 1193 6466 4962 6617 4334 5062 * * 36 33 5448 * 1992 418 * * 5403 1729 0 A 37 2429 * 3922 2138 * 3138 6199 * 3924 * * 3505 * 6554 6377 2437 * * * 4937 37 56 4723 * 2154 367 * * 5403 1983 0 V 38 7025 * * * 4927 * * 2369 * 1008 * * * * * 5186 * 3780 3123 4221 38 207 * 2902 * * * * 5403 0 0 N 39 5714 * 2623 4487 * 1540 4857 * 3750 * * 2531 * 3682 4895 * * 5388 6284 * 39 19 6284 * 1585 585 0 * 5235 1000 3401 W 40 * * * * * * * * * 4937 1253 * * 6264 4140 * * * 1065 * 40 25 5847 * 1000 1000 * * 5403 1000 0 P 41 * * 4139 4061 * 3611 * * 5022 * * * 495 * 5856 4923 * 6505 * * 41 10 7183 * 0 * * * 5403 1000 0 E 42 722 * * 4609 * 3630 * * * * * 5847 2846 * 5008 3567 * * * * 42 0 * * * * * * 5403 0 0 M 43 4140 * * * * 4937 * * * * 169 * * * 5582 * * * * * 43 0 * * * * * * 5403 0 0 T 44 5717 * * 4739 * * 5505 6985 6047 * 6199 * * 6679 5152 4757 379 4604 * * 44 0 * * * * * * 5403 0 0 M 45 * * * * 5582 * * * * 5896 163 * * * * 5198 4573 * * * 45 0 * * * * * * 5403 0 0 R 46 3331 * 2308 4204 5946 4853 * 7183 7496 4931 * 4928 3010 7145 4472 4289 2501 3488 6645 6348 46 0 * * * * * * 5403 0 0 F 47 * * * * 367 * * * * 3040 6577 * * * * * * 6264 * 3657 47 14 * 6708 * * * * 5403 0 0 T 48 3519 * 3767 4003 * 4179 4896 * 3096 5725 6676 6595 2960 6112 2583 4183 3263 4718 * 5318 48 0 * * * * * 0 5404 0 1000 I 49 3131 * * * 4829 * * 4544 6625 2308 5651 * 6822 * * * 4482 1009 * 5297 49 22 * 6056 * * 0 * 5404 0 1000 T 50 1789 * 3461 4192 * 4824 * 5472 2793 5732 * 5342 4365 4344 5040 3602 4144 4251 * * 50 53 5102 7234 1585 585 0 * 5372 1696 1000 P 51 4868 * 1421 2832 * 4122 6056 * 4368 * * 4525 2225 6695 5541 4557 * * * * 51 0 * * * * 0 * 5407 0 1000 Q 52 2540 * 3280 5068 5503 3149 5171 * 3597 * 6745 4823 2558 6858 4995 2909 4309 * * 6374 52 93 4843 5190 996 1004 * * 5401 1668 0 T 53 1746 * * 4681 * 5970 * 5278 3652 4204 6376 4551 * * 4436 3079 3727 2457 6570 * 53 8 * 7440 * * 0 * 5412 0 2249 K 54 4363 * 2365 3536 * * 5926 6758 4692 2267 3785 5756 5620 3513 * 5108 5378 3339 4377 * 54 33 5471 * 551 1656 0 * 5407 1565 1000 M 55 4018 * * * 4463 * * 3381 * 914 3944 * 4326 * 5795 5561 5657 3581 * 6813 55 15 * 6643 * * * * 5401 0 0 S 56 2917 * 3554 2956 * 5723 6543 4901 2997 6353 7071 3404 6956 3945 3717 3032 3836 6682 * * 56 0 * * * * 0 * 5397 0 1000 E 57 3513 * 3611 4739 * 1523 5607 * 3836 4648 5924 4889 4896 3970 4373 4190 4330 6113 * * 57 11 7048 * 0 * * * 5383 1000 0 I 58 4681 * * * 2792 * * 3007 * 1107 5637 * * 6607 4864 * * 2720 * 6427 58 0 * * * * * * 5383 0 0 K 59 3001 * * 4773 * 5769 3731 * 1301 * * 6385 4992 3488 3605 4720 4436 4636 * * 59 0 * * * * * * 5383 0 0 T 60 2454 * 5766 3164 * 5515 * 5917 4307 5478 * 6738 1786 * * 6537 4162 2250 * * 60 0 * * * * * * 5383 0 0 G 61 * * 6534 * * 174 * * 6038 * * 4182 * * * 6082 5794 * * * 61 0 * * * * * * 5383 0 0 D 62 3026 * 882 4049 * * * * 5794 * 5828 * * 2682 * * 3829 * * 6307 62 0 * * * * * * 5383 0 0 K 63 2891 * * 3747 * 6605 5335 5009 2165 5241 * 4921 5232 3449 3141 3620 3770 4770 * 5698 63 13 * 6760 * * * * 5383 0 0 V 64 6880 * * * 5591 * * 2111 * 4164 * * * * * * 6428 574 * * 64 0 * * * * 0 * 5379 0 1000 A 65 3183 * 3726 2872 * * 3164 * 4168 5422 4579 4998 * 3939 2468 5489 3117 6013 * 6034 65 0 * * * * * * 5376 0 0 F 66 4524 * * * 431 6098 * 3772 * 4605 * * * * * * 5489 3974 * * 66 11 * 7037 * * * * 5376 0 0 N 67 4773 * 3639 2869 * 5033 5344 * 4721 5062 4199 5770 * 3020 3156 3703 2293 4867 * * 67 13 * 6787 * * * 0 5392 0 1000 F 68 2803 * * * 1712 * * 4045 * 1811 * * * * * 6741 5753 2489 * * 68 41 5587 7096 0 * 0 * 5392 1652 1664 V 69 3776 * 4602 2039 * 4979 5157 5168 3593 * * * * 5748 3180 5845 3477 2084 * * 69 46 6782 5498 0 * 0 * 5531 1000 1000 Q 70 5649 * 4718 4286 * 6406 * 3290 2909 4197 6226 3591 6581 2085 2755 6982 * 3466 * * 70 103 3853 * 0 * 959 1042 5504 2760 1624 Q 71 3697 * 3177 2772 * 4452 5008 4215 3856 6005 6591 4478 5524 4041 3258 4154 3323 4255 * * 71 46 4985 * 0 * 0 * 5488 1823 1000 G 72 2600 * 2053 4356 * 1655 * * 3768 * 6844 5008 5428 * 5800 4614 4935 * * * 72 70 4395 * 389 2080 * * 5488 2305 0 N 73 4305 * 2767 4015 * 1046 * * 5784 * 6444 3961 * 5487 5990 3742 5073 5643 * * 73 26 6796 6819 0 * * * 5487 1000 0 L 74 3204 * 3028 2933 * 2396 * 5840 3727 4294 6637 5350 * 4770 4444 3625 3897 4696 * * 74 13 6848 * 0 * * 0 5481 1000 1000 S 75 2840 * * 6202 2809 6638 * 4983 * 3566 * 5970 3805 * * 3467 * 4948 4581 1618 75 0 * * * * * 0 5476 0 1000 L 76 6548 * * 3774 * * 6026 3783 5703 4262 4239 * * 3861 3255 * 2276 2172 3977 4694 76 0 * * * * 0 * 5476 0 1000 L 77 5000 * * * * * * 996 * 2799 * * * * * * 6202 1765 * 5971 77 0 * * * * * * 5469 0 0 Q 78 3766 * 5173 4166 * * * 3533 6016 4748 5455 * * 5340 3493 4314 1408 2829 * * 78 0 * * * * * * 5469 0 0 D 79 2580 * 3447 3237 * * 4621 5072 3150 * * 3487 * 4330 3295 2745 4642 5503 * * 79 0 * * * * * * 5462 0 0 I 80 4102 * * 6189 5868 * * 983 * 2137 4814 * 6007 * * * * 3152 * 6160 80 15 6583 * 0 * * * 5462 1000 0 K 81 6510 * * 2231 * * 3895 * 2145 * 4986 * * 2519 2501 4600 4674 5676 * * 81 0 * * * * * * 5321 0 0 V 82 3545 * * * * * * 5366 2410 4436 3956 * 1573 * 4119 5169 5913 2706 * * 82 0 * * * * * * 5211 0 0 S 83 1084 * * * * * * * 5087 * * 4639 * 3695 * 1940 3049 * * * 83 0 * * * * * * 4592 0 0 Q 84 * * * 3991 * * * * 1651 * * * * 693 * * * * * * 84 0 * * 0 * * * 3907 0 0 //