HHsearch 1.5 NAME c1xk8A_ FAM FILE c1xk8A_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c1xk8A_.a3m DATE Thu Mar 11 00:37:29 2010 LENG 107 match states, 107 columns in multiple alignment FILT 100 out of 257 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.3 EVD 0.4268 0.2901 SEQ >ss_dssp CCTTSEEEEEEEESSHHHHHHHHHHHHHTTSCSEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEGGGHHHHHHHHHHHCSSSSCCEEEEECCSCCHHHHH HHHHTTC >sa_dssp DEECDBBCACABACDDECADEBBECADDDDCABCCDCDDECECEDEEDECEDECEBBCACABABCECCEDACDCAEEDBDDEECDCDDDECEEEEDEDBD DADDCBE >ss_pred CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCEEEECCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCHHHHH HHHHHCC >ss_conf 9678299999966998999999999986566489981288099999989775612789999809999999999999847898863999994017989999 9886249 >Consensus xxxxxxxivxtTxpxxexAxxiaxxlvexrLaACvnixxxixSxYxWxGxixxxxExxlxxKTxxxxxxxlxxxixxxHpYevPeIixxxixxxxxxYlx Wixxxtx >c1xk8A_ YVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVPALTDFVRSVHPYEVAEVIALPVEQGNFPYLQ WVRQVTE >UniRef50_D0LTN4(31-130:172) CutA1 divalent ion tolerance protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTN4_HALO1 E=3e-24 s/c=1.12 id=30% cov=94% -----HITVEVSAASREQAETIARAAVHQRLAASAQIAP-VRTVYRWRGAVHETDEHVVRLFTRRARFAELAACVRQHHSYELPQVVAVPIVQAEDAFRR WIDEHT- >UniRef50_A8EXQ4(54-154:154) Periplasmic divalent cation tolerance protein n=10 Tax=Rickettsia RepID=A8EXQ4_RICCK E=5e-26 s/c=1.17 id=25% cov=95% -----YCLTLTTTNDLQIAEKIASVLLELNLAACIQI-DNVKSYFRWDSRVTLETEYRLIIKAKSSNYKKIENKILEIHNYELPQIIKINIDYGFQKYLK WIDQNSK >UniRef50_B0SIL7(6-106:109) Divalent ion tolerance protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SIL7_LEPBA E=5e-20 s/c=0.98 id=26% cov=92% -------LVFTTISDRDMAEEHISEMLEQGIIISGTIFPEVELVYLWEGKITVDTENKILLKTTADKYDAIETYIQKRHPYIAPEIIRMDVSFGSPAYKA FVAD--- >UniRef50_B0SCP6(3-106:107) Divalent ion tolerance protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCP6_LEPBA E=7e-30 s/c=1.26 id=30% cov=98% -IEKNYVTVYTTFPSKEEAKKTAKIVISEQLAACANLIDKMESIYVWNNRLEESNEVVCFLKTTAEKSDSLMQRIKELHSYDTPCIVVWPILTGDKDYLD WIRKS-- >UniRef50_Q7NDP4(2-105:113) Glr4189 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NDP4_GLOVI E=5e-25 s/c=1.11 id=30% cov=98% --EGALLVVLTTVPDHASGIAIARTLVERRLVACAQLLPPMVSVFIWQDKLSTETEQLLLLKVPAKFYAVLEVALGELHPYDVPEIVALEAVRVAESYLG WAAAQT- >UniRef50_B4V8I0(4-104:105) CutA1 divalent ion tolerance protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4V8I0_9ACTO E=3e-22 s/c=1.04 id=24% cov=95% -----HVIVLTTVDSQDAARRLSRSAVEANLAASGQVTGPIDTTYRHLGEVREGTEWQVTFRTAQDRRVSLEEHLVAEHPYDSPEVLTFGIDAGRAEHLA WITRST- >UniRef50_B9KIC1(2-105:118) Periplasmic divalent cation tolerance protein (CutA) n=3 Tax=Anaplasma RepID=B9KIC1_ANAMF E=2e-24 s/c=1.09 id=25% cov=98% --EDGLSVVYATFPDYDTAYKIGSSLLRDGVVACVNIFCNVTSMYMWDEEMHTGEECVAVMKTVKSLGEEAINRILEQHPYDIPALFSVDAERCSPAFLE WVALRT- >UniRef50_C5F214(3-102:108) Predicted protein n=2 Tax=Helicobacter RepID=C5F214_9HELI E=2e-16 s/c=0.87 id=24% cov=90% -----------TTTTSENAKILISRAMESGFVSCVQRM-AIESYYFWEEKLNCEEEILLSFKVDRKNFKNLKVLIAKNHIYEIPEIIGISLKDVSKSYKK WHKKVIK # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * Y 1 * * * * * * * * * * * * * * * * * * * 0 1 0 * * * * * * 2235 0 0 V 2 3377 * * * * * * 1733 2392 * * * * * * * 2270 2286 * * 2 0 * * * * * * 3339 0 0 P 3 3672 * * 1397 * * * * 4566 * * * 2590 * * 1585 * * * * 3 0 * * * * * * 4244 0 0 G 4 4675 * 1989 5082 * 2461 4850 * 4769 * * 2379 * 5031 * 2297 * * * * 4 0 * * * * * * 4476 0 0 S 5 3107 * 4833 5467 * 3011 * * * * * 4221 5183 3068 * 1898 2575 * * 3930 5 0 * * * * * * 4739 0 0 V 6 4861 * * * 3242 * 3352 4417 * 2409 2706 * 6231 * * 6011 6103 2425 6133 2946 6 0 * * * * * * 5042 0 0 S 7 3382 2974 6060 * * * 6364 3006 4161 2912 5412 * * 5964 * 2809 5218 2276 * 5580 7 18 6338 * 0 * * * 5124 1000 0 A 8 5103 6377 * * 4661 * * 2185 * 1474 4566 * * 6874 * * 5232 1932 * * 8 0 * * * * * * 5209 0 0 A 9 3190 5953 * * * 5461 * 2288 * 3821 6323 * * * * * 6271 887 * 6653 9 0 * * * * * * 5270 0 0 F 10 * * * 6202 3783 * 5573 4166 * 2078 4365 6444 * 6656 6417 6055 4168 4674 4045 1522 10 0 * * * * * * 5301 0 0 V 11 4604 3653 * * 6330 * * 2797 * * * * * * * 4903 956 2521 * * 11 14 6716 * 1585 585 * * 5373 1000 0 T 12 5166 6578 * * * * * 6641 * * * 4232 4800 6480 * 3627 398 6453 * * 12 0 * * * * * * 5427 0 0 C 13 2406 2596 * 4664 3015 * 5498 4647 * 3423 6494 * * * * 5066 3524 2814 5529 4810 13 0 * * * * * * 5427 0 0 P 14 3646 * 4663 6105 * 3351 * * 5425 * * 4758 908 5576 5804 3045 6069 * * * 14 68 * 4450 * * * * 5427 0 0 N 15 * * 1305 * * 6566 * * * * * 2849 6343 * * 1652 3234 6785 * * 15 0 * * * * 0 * 5426 0 2548 E 16 3473 * 4709 2936 5695 * 4625 4252 3543 4394 4260 6261 4146 3622 2585 5412 6578 4089 6158 5708 16 0 * * * * * * 5427 0 0 K 17 3591 * 2302 1203 * 5721 6682 * 3852 5432 6713 4900 6704 3938 6522 6598 6842 6501 * * 17 0 * * * * * * 5427 0 0 V 18 3569 6316 4538 1896 * 6681 5373 5623 5281 4335 5240 4187 * 4653 5188 2831 3495 3843 6105 * 18 0 * * * * * * 5427 0 0 A 19 114 * * * * 4742 * 6254 * 6105 * * * * * * * 6481 * * 19 0 * * * * * * 5427 0 0 K 20 3825 6509 6541 1907 * 6641 4849 6665 2831 4211 5165 4820 * 4048 2466 5602 4929 5396 * 6629 20 0 * * * * * * 5427 0 0 E 21 3054 * 4617 2825 5896 5808 5683 6069 2710 5020 6794 4662 * 4152 2705 3861 3387 * * 5469 21 0 * * * * * * 5427 0 0 I 22 5010 * * * 4785 * 5799 1256 * 1376 5138 * * * * 6247 6919 4035 * * 22 0 * * * * * * 5427 0 0 A 23 784 * * * * 2927 * 4177 * * * * * * * 2797 4689 4320 * * 23 0 * * * * * * 5427 0 0 R 24 6578 6247 3932 3307 * 5155 3959 * 2650 * 6339 5088 * 3661 1871 3215 4439 6630 * * 24 0 * * * * * * 5427 0 0 A 25 2612 * 5656 3345 6506 3831 6722 4192 4806 3743 4902 * * 3721 3559 3762 3032 4419 * 5298 25 0 * * * * * * 5431 0 0 V 26 2937 6477 * * 5432 * * 3615 * 640 4135 * * * * * 6557 4495 * * 26 0 * * * * * * 5431 0 0 V 27 * * * * * * * 3440 * 1366 4846 * * * * * * 1043 * * 27 0 * * * * * * 5431 0 0 E 28 4757 * 3322 1326 * 4575 6459 * 3551 6322 7147 5112 * 3725 3435 4044 4369 * * * 28 0 * * * * * * 5431 0 0 K 29 3312 * 3700 1849 * * 6540 * 2744 5683 5640 4152 * 3151 3353 3672 * * * * 29 0 * * * * * * 5431 0 0 R 30 6557 * * 4952 * 3291 4819 * 1818 * * 4787 * 4090 1285 5038 * * * * 30 0 * * * * * * 5431 0 0 L 31 6946 * * * 4292 * * 4173 6982 359 5236 * * * * * 6264 4315 * 6928 31 0 * * * * * * 5431 0 0 A 32 680 4830 * * * 6804 * 2634 * * * * * * * 6283 * 2664 * * 32 0 * * * * * * 5431 0 0 A 33 209 * * * * 5296 * 5207 * * * * * * * 4792 * 4429 * * 33 0 * * * * * * 5431 0 0 C 34 * 119 * * * 5198 * * * * * * * * * 4263 * * * * 34 0 * * * * * * 5431 0 0 V 35 2032 4220 * * 5573 3844 * 3523 * * * * * * * 6502 5484 1027 * * 35 14 * 6693 * * * * 5431 0 0 N 36 6499 * * * * * 4217 * 6149 * * 932 * 1835 * 3543 5011 * * * 36 69 * 4411 * * 0 * 5422 0 1000 L 37 5840 * * * * * * 1054 6199 2266 5056 * * 6973 3831 * 6399 2962 5731 6364 37 136 * 3477 * * 0 * 5403 0 2616 I 38 4987 * 4741 6417 2508 5486 * 2418 * 2408 4847 6052 * 6470 6053 6739 3545 2938 6373 4966 38 38 * 5273 * * 0 * 5371 0 3245 P 39 4757 6599 3500 4291 * 2703 6586 * 4722 * * 6428 1143 6673 5448 3415 5620 * * * 39 152 * 3319 * * 0 * 5402 0 1688 Q 40 3081 * * 2928 * 2443 5035 6485 3434 * * 3375 2607 3808 3970 6341 6445 * 6283 * 40 100 6943 4085 2322 322 0 * 5367 1000 3441 I 41 5371 5501 * * * 4138 * 1301 * 6522 3328 * * * * 5539 6492 1523 * * 41 0 * * * * 0 * 5398 0 2564 T 42 5507 * 4087 2407 * * 4714 4872 4004 5153 * 4687 * 3952 2513 4881 2275 4359 * * 42 0 * * * * * * 5431 0 0 S 43 4869 5755 * * * * * * * 5809 * * * * * 165 4732 * * * 43 0 * * * * * * 5431 0 0 I 44 5755 * * 6946 4317 6846 4345 2070 * 3395 3091 * * 5890 5377 6622 3327 2228 * 4309 44 0 * * * * * * 5431 0 0 Y 45 * * * * 3455 * * * * * * * * * * * * * * 138 45 0 * * * * * * 5431 0 0 E 46 * 5764 * 5307 4030 * 4908 4965 4934 3887 4288 5875 * 7020 1714 4051 * 3923 2506 4426 46 0 * * * * * * 5431 0 0 W 47 * * * 6135 6494 * 4998 * * * * * * * * * * * 104 6283 47 16 6462 * 2322 322 * * 5431 1000 0 K 48 * * 3047 1982 * * * * 2571 4558 * 2989 * 2017 4565 * * * * * 48 0 * * * * * * 5431 0 0 G 49 6464 6489 3609 4165 * 511 * * 4794 * * 3607 * * * 6607 6712 * * * 49 0 * * * * * * 5436 0 0 K 50 3618 * 4528 1923 * * * 5148 1711 * * 6346 * 3610 4028 4173 5280 4601 * * 50 15 6625 * 2000 415 * * 5436 1000 0 I 51 * * * * 6669 * * 1553 * 2027 4600 * * 4686 5738 6876 5548 1934 6201 * 51 0 * * * * * * 5436 0 0 E 52 4995 2913 5859 1570 * 4859 3484 * 4018 * * 4283 * 3608 4885 5787 4412 4204 * 6702 52 0 * * * * * * 5436 0 0 E 53 5646 4915 3635 2014 * 6724 4084 * 4042 6607 5794 4723 * 4025 3375 3518 3155 3917 * * 53 0 * * * * * * 5436 0 0 D 54 3555 * 2013 1745 * 3102 * * 5206 * * * * 6491 * 2577 4424 * * * 54 0 * * * * * * 5436 0 0 S 55 3318 6811 3726 2829 5582 4755 6521 7023 3151 6877 6141 4231 3609 3711 5736 3103 3108 * * * 55 0 * * * * * * 5436 0 0 E 56 * * * 0 * * * * * * * * * * * * * * * * 56 0 * * * * * * 5436 0 0 V 57 3713 4163 6894 * 3817 * 4584 3320 * * * 5815 * 5716 7206 5167 3774 1717 3361 3311 57 0 * * * * * * 5436 0 0 L 58 4499 * * 5430 6346 4790 6594 3315 4407 1934 4795 6369 4655 3174 3874 5559 5079 2768 * * 58 0 * * * * * * 5436 0 0 M 59 3194 4821 * * * * * 3857 * 917 3847 * * * * * * 2418 * * 59 0 * * * * * * 5436 0 0 M 60 6702 6314 * 7438 4452 * 6907 2007 * 1608 4264 6669 * 5153 5327 4886 4022 3320 5435 7023 60 0 * * * * * * 5436 0 0 I 61 3227 5626 * * 2834 6508 * 1742 * 2276 3183 * * * * * * 3424 * 6258 61 0 * * * * * * 5436 0 0 K 62 * * * * 6465 * 6135 * 172 6201 * 6314 * 6458 4898 * * * * 5991 62 0 * * * * * * 5436 0 0 T 63 4195 4521 * * * * * 6642 * 5080 * * * * * 3583 449 4434 * * 63 22 6851 7206 1000 1000 * * 5436 1000 0 Q 64 5376 * 6067 5088 6308 6745 4428 5760 3976 4401 5766 7052 4598 4418 2418 3443 1755 4490 * * 64 0 * * * * 0 * 5437 0 1000 S 65 2235 6894 4594 3031 * 5954 4833 6275 4238 4129 * 5322 3811 3976 3595 3593 3562 5011 * * 65 0 * * * * * * 5436 0 0 S 66 3072 * 2569 2366 * 3712 5755 * 3279 6695 * * * 4745 5462 2410 4441 5886 * * 66 13 6779 * 0 * * * 5436 1000 0 L 67 3063 5643 * * 6675 5674 4003 * 2638 2086 6695 2929 * 4355 2729 6314 * 5710 * * 67 0 * * * * * * 5436 0 0 V 68 4078 5458 * 4962 2496 6655 * 4263 4967 3487 5466 * * 5935 3931 5753 5539 2635 4385 2539 68 0 * * * * * * 5436 0 0 P 69 2918 * 2459 2996 * 4659 * * 2821 4598 * 6919 2330 5260 6813 4302 5495 5442 * * 69 0 * * * * * * 5436 0 0 A 70 2260 * 4330 2267 * 5104 * * 2856 4205 * 4879 6671 4347 3238 3636 6499 5514 * * 70 0 * * * * * * 5436 0 0 L 71 3746 * * * 6458 * * 2060 * 974 * * * * 6779 * 5540 2894 * * 71 0 * * * * * * 5436 0 0 T 72 3783 5474 6544 2161 4711 6464 6699 3308 2872 4759 4696 * * 4990 3745 4508 4106 3821 6521 6850 72 0 * * * * * * 5436 0 0 D 73 2473 * 3006 2193 * 6712 * * 2988 6848 * 4135 * 3624 4380 4052 4235 4918 * * 73 0 * * * * * * 5436 0 0 F 74 3161 4437 * 4495 3627 * 4785 5157 3402 2624 * * * 6842 2448 6508 3903 4543 4456 4740 74 0 * * * * * * 5436 0 0 V 75 5448 * * * 6861 * * 1137 * 2173 6433 * * * * * * 1835 * * 75 13 * 6779 * * * * 5436 0 0 R 76 4039 5531 5568 3501 * 4705 5128 5539 2034 2896 * 7411 6536 3705 2757 5488 4224 5377 * * 76 0 * * * * 0 * 5395 0 1000 S 77 2397 * 4401 1708 * 6315 6553 * 3642 * * 4722 * 3385 4557 2852 5052 6861 * * 77 14 * 6703 * * * * 5436 0 0 V 78 4287 * * 3688 * * 3598 3147 5721 1800 4355 3195 * 4237 4212 5475 6258 3857 * * 78 0 * * * * 0 * 5427 0 1000 H 79 * 5494 * * * * 60 * * * * * * * * * * 5757 * * 79 0 * * * * * * 5436 0 0 P 80 * * 5172 6882 * 6553 * 6080 * * * 5092 692 * * 1970 4842 * * * 80 0 * * * * * * 5436 0 0 Y 81 5333 * * * * * 6333 * * * * * * * * * * * 5991 78 81 27 * 5757 * * * * 5436 0 0 E 82 5950 * 1484 1191 * * * 5755 4954 * * 5359 * 4742 6335 6034 4377 * * * 82 0 * * * * 0 * 5375 0 1000 V 83 5815 4304 * 4711 * * * 3493 * 2835 6702 6991 6757 6811 * 4615 2469 1295 * * 83 0 * * * * * * 5436 0 0 A 84 6865 * * * 6464 * * * * * * 5757 56 * * * * * * * 84 0 * * * * * * 5436 0 0 E 85 2697 2818 * 912 * * * 6879 6314 * 5731 * * 3344 * 6479 * 5438 * * 85 0 * * * * * * 5436 0 0 V 86 * * * * 4802 * * 636 * 2922 * * * * * * * 2754 4626 * 86 0 * * * * * * 5436 0 0 I 87 4373 * * 6544 4213 * * 1742 * 1716 6837 * * * * * 3840 2390 * 6113 87 15 * 6581 * * * * 5427 0 0 A 88 1812 4568 * 4662 4725 3879 6857 6065 4562 5465 5123 * * 5186 4253 3369 3222 3376 6720 5581 88 0 * * * * 0 * 5415 0 1000 L 89 6298 6449 * * 3007 * 6585 2639 * 1670 3708 * * 5107 6154 * 3980 3529 3369 * 89 0 * * * * * * 5427 0 0 P 90 3151 * 3457 3331 * 6005 * * 3438 * 6494 3907 1478 6474 5578 3056 * * * * 90 31 * 5560 * * * * 5427 0 0 V 91 3136 4975 * 6522 7041 * * 1772 * 3568 4764 * 4138 * * 6437 4153 1749 * * 91 29 * 5670 * * 0 * 5415 0 1626 E 92 3423 5497 2385 2814 7034 * 4450 5520 4610 5244 5701 5017 6185 5673 * 3153 3207 3261 * * 92 28 6562 6881 1000 1000 0 * 5408 1000 1605 Q 93 2757 * 2679 4118 4713 3319 4378 6787 2914 5209 * 4325 * 3385 4754 4267 6905 * * 4636 93 41 6568 5834 1000 1000 0 * 5419 1000 1000 G 94 2828 5044 * * * 1191 * 3698 * 6174 * * 4731 * * 4092 5823 2510 * 6596 94 16 * 6543 * * 0 * 5419 0 1492 N 95 4499 * 3322 3976 4685 5712 4076 * * 3224 * 2266 * 6602 5996 1944 4710 * * 4793 95 14 * 6671 * * 0 * 5411 0 1000 F 96 3140 * 4222 2786 6832 4745 * 5787 3364 * * 6473 2324 3765 4361 3949 3219 6513 * 6589 96 0 * * * * 0 * 5419 0 1000 P 97 1860 * 3033 2566 * 3770 6523 * 4282 * * 5580 3464 5437 4823 3500 5235 * * 6263 97 30 6469 6784 1000 1000 * * 5423 1000 0 Y 98 * * * * 2346 * 5977 * * * * * * * * * 4588 * * 423 98 0 * * * * 0 * 5424 0 1000 L 99 2887 * * 4680 5986 4352 * 4959 4183 985 5058 6305 * 5508 4653 6183 5604 5066 * * 99 0 * * * * * * 5423 0 0 Q 100 2721 * 2270 2938 * 5082 6753 * 3143 6574 * 2751 * 4205 3840 4646 5277 6680 * * 100 0 * * * * * * 5423 0 0 W 101 * * * * 4691 * * * * * * * * * * * * * 57 * 101 0 * * * * * * 5423 0 0 V 102 3991 * * * * * 6050 1888 * 1858 4818 * * * 6530 * * 1600 * * 102 0 * * * * * * 5423 0 0 R 103 2639 6864 3026 3971 6935 6452 5639 4175 3359 4608 * 3004 * * 2511 4477 4452 5635 * * 103 0 * * * * * * 5389 0 0 Q 104 3137 * 2658 2110 * 5485 * * 3585 5284 * 4948 * 3431 3509 3423 4092 * * * 104 0 * * * * * * 5357 0 0 V 105 4870 6006 * 2248 * 6268 5440 * * * 6352 3041 * 3223 6201 1797 3911 3395 * * 105 0 * * * * * * 5303 0 0 T 106 5601 * * * * * * 4588 * * * * * * * 5796 803 1529 * * 106 0 * * * * * * 5132 0 0 E 107 * * 2115 1375 * * * * 1542 * * * * 4635 * * * * * * 107 0 * * 0 * * * 4547 0 0 //