HHsearch 1.5 NAME c1xf7A_ FAM FILE c1xf7A_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c1xf7A_.a3m DATE Tue Mar 9 06:15:45 2010 LENG 29 match states, 29 columns in multiple alignment FILT 112 out of 10329 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.9 EVD 0.5453 3.9482 SEQ >ss_dssp CCEECSSSCCEESSHHHHHHHHTTTSCCC >sa_dssp EECDAEEDEEECDEDDDCEEBDDEDECEE >ss_pred CCEECCCCCCEEEEHHHCCEEEEEECCCC >ss_conf 91477457877610100745564307679 >Consensus KpyxCxxCgkxFxxxxxlxxHxrxHtgEk >c1xf7A_ KPFQCKTCQRKFSRSDHLKTHTRTHTGEK >UniRef50_Q9VH70(509-537:814) Testis-specific zinc finger protein topi n=10 Tax=Diptera RepID=TOPI_DROME E=0.0006 s/c=1.57 id=33% cov=103% RQYLCDICGKSYTQSSHLWQHLRFHQGVK >UniRef50_Q7PZ69(350-378:830) AGAP011759-PA n=1 Tax=Anopheles gambiae RepID=Q7PZ69_ANOGA E=0.001 s/c=1.54 id=37% cov=93% RPHKCEICNRGFSQLSNLRSHRKTHS--- >UniRef50_Q3KQV3(560-588:632) Zinc finger protein 792 n=11 Tax=Eutheria RepID=ZN792_HUMAN E=2e-05 s/c=1.75 id=27% cov=103% RPYECSECGKAFNQRPTLIRHQKIHIRER >UniRef50_C3YYS7(32-60:752) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YYS7_BRAFL E=0.0004 s/c=1.59 id=37% cov=103% KTYICGECGYRTVRKTNLSRHMKSHTGEK >UniRef50_P59923(623-651:1031) Zinc finger protein 445 n=14 Tax=Eutheria RepID=ZN445_HUMAN E=0.0001 s/c=1.64 id=33% cov=103% KPYKCTKCRKTFRWRSNFTRHMRLHEEEK >UniRef50_Q4SUA6(443-471:590) Chromosome 3 SCAF13974, whole genome shotgun sequence. (Fragment) n=3 Tax=Tetraodontidae RepID=Q4SUA6_TETNG E=0.0007 s/c=1.55 id=37% cov=103% RPYVCTICKKGWPSGGDLQKHMRTHTGER >UniRef50_B7PRL8(119-147:201) BTEB3 protein, putative n=1 Tax=Ixodes scapularis RepID=B7PRL8_IXOSC E=0.0003 s/c=1.59 id=37% cov=103% KPFKCNYCPKAFTTKADWVIHERIHTGDR >UniRef50_UPI0001555590(527-551:660) PREDICTED: similar to zinc finger protein 212 n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555590 E=0.0005 s/c=1.83 id=38% cov=90% RPHRCDQCLKSFSCKASLATHQRSH---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * * * * * * 559 * * * * * 1639 * * * * * 1 0 * * * * * * 4744 0 0 P 2 5215 * * * * * * * 3750 5402 * 6347 585 4123 4307 4317 5217 6472 * * 2 0 * * * * * * 4755 0 0 F 3 * 4251 * * 1527 * 3335 * * * * * * * * * * * * 996 3 0 * * * * * * 4920 0 0 Q 4 3768 6613 * 2905 * * 6548 3996 2172 5080 5362 4251 4441 3004 5235 4264 4041 3813 * * 4 0 * * * * * * 4920 0 0 C 5 * 78 * * * * * * * * * * * * * * * * * 4252 5 17 6409 * 1000 1000 * * 4926 1000 0 K 6 5350 6603 3022 3749 * 3915 5313 * 4226 6952 * 3525 2332 3487 5385 3026 3574 * 6726 * 6 0 * * * * * * 4926 0 0 T 7 * * 3953 2452 2992 6409 5000 2709 4302 4796 5315 6107 * 4003 * * 4459 3001 * 3798 7 0 * * * * * * 4926 0 0 C 8 * 78 * * * * * * * * * * * * * * * * * 4252 8 0 * * * * * * 4926 0 0 Q 9 6598 6616 3264 4722 6739 970 3959 * 5137 * * 4306 4431 5087 5595 3684 * * * * 9 0 * * * * * * 4926 0 0 R 10 4897 * * 6405 * * 6652 * 764 5667 5249 6107 * 4537 2744 5983 * 6857 6409 3908 10 0 * * * * * * 4926 0 0 K 11 2339 4503 * * 5757 3660 6821 * 4225 * * 6557 * 4576 2304 2587 2682 5572 * * 11 0 * * * * * * 4926 0 0 F 12 6151 5311 * * 271 * * 6314 * * * * * * * 6718 5336 * 6416 3765 12 0 * * * * * * 4926 0 0 S 13 2883 5592 5133 * * 5868 6609 4572 2632 5295 5613 3501 5517 * 3388 2551 3019 5038 * 6883 13 0 * * * * * * 4926 0 0 R 14 * * 4510 5093 6882 6666 4311 6962 4826 5326 6640 5295 * 1808 2124 3965 4597 6198 3873 4258 14 0 * * * * * * 4926 0 0 S 15 4794 6405 7042 5832 6625 5476 7030 6652 1781 4379 * 3482 3989 4443 3154 2402 * 5773 6603 6746 15 0 * * * * * * 4926 0 0 D 16 4004 6725 3713 4066 6761 2985 4354 6898 5758 * * 4414 5048 7157 6576 1490 3602 5908 * 4996 16 0 * * * * * * 4926 0 0 H 17 6319 * 3512 4987 * 6188 1789 6151 6609 6870 * 2066 * 4221 * 3204 4067 5276 * 4445 17 0 * * * * * * 4926 0 0 L 18 * 5108 * * 3449 * 7068 5678 5927 592 4277 * * 5959 5358 * * 4623 5166 6364 18 0 * * * * * * 4926 0 0 K 19 5400 6625 6607 5438 6107 * 7096 3715 2088 5027 5794 5194 * 3476 2983 3032 3118 4274 5778 * 19 0 * * * * * * 4926 0 0 T 20 4502 * 5927 4658 6489 * * 4310 2861 4790 3860 4497 * 3370 1857 4949 4046 3765 * 6364 20 0 * * * * * * 4926 0 0 H 21 * * * * * * 0 * * * * * * * * * * * * * 21 24 5908 * 0 * * * 4926 1438 0 T 22 6198 * * 3401 * 7050 5181 3059 3152 3481 2203 * * 2565 4047 6906 7010 4288 * 5600 22 27 5770 * 0 * * * 4926 1438 0 R 23 * * 6021 * 6569 * * 6367 2928 3675 5864 6246 * 4534 767 5669 5327 4729 * 6843 23 0 * * * * * * 4926 0 0 T 24 6829 * * * 6564 6188 * 1793 4708 3368 6107 6889 * 5688 5219 2963 2079 3195 * * 24 23 5974 * 0 * * * 4926 1433 0 H 25 * * * * * * 0 * * * * * * * * * * * * * 25 0 * * * * * * 4926 0 0 T 26 4709 * * 6635 * 6851 * 5494 * 4864 6593 5000 * 5206 6533 2330 744 6505 * * 26 0 * * * * * * 4928 0 0 G 27 4889 * 6574 5164 * 582 6458 * 3713 * * 3777 * 4546 4963 5357 * * * * 27 0 * * * * * * 4915 0 0 E 28 * * 3898 400 * * * 5332 4724 * * * 6353 5638 * 6444 6702 4473 * 6151 28 0 * * * * * * 4734 0 0 K 29 * * * * * * * * 660 * * * * * 1445 * * * * * 29 0 * * 0 * * * 4703 0 0 //