HHsearch 1.5 NAME c1x0gA_ FAM FILE c1x0gA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c1x0gA_.a3m DATE Sat Mar 13 09:59:50 2010 LENG 102 match states, 102 columns in multiple alignment FILT 103 out of 443 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.8 EVD 0.4161 -0.0747 SEQ >ss_dssp CCEECHHHHHHTCCCCCEEEEEEECSSSSEEEEEEECSSCCTTCEEECSSSCCEEECGGGHHHHTTCEEEEEEETTEEEEEEECTTCSEECSSSSEEECC CC >sa_dssp DBEBCEDABECBEDEEDBBACCDECEECDDDBCCDDCEECDEEBDDCECEEBCAAAADEABECAEDADACCDEDEEDDCCBBDBEDCDEDCEDCCBACCE EE >ss_pred CEEECHHHHHHHHHHEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEECCEEEEECHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC CC >ss_conf 9465889998876300689998469877503566552468998589852683999718889750798997672786330389878868756898510113 59 >Consensus MixiTxxAxxxixxxxxlRixvxxxGCxGxxyxlxlxxxxxxxDxvxxxxgixvxidxxxxxxLxgxxiDyxxxxxxxgFxxxnPnaxxxCgCGxSFxxx xx >c1x0gA_ MVELTPAAIQELERLQILRIQVQPSECGDWRYDLALVAEPKPTDLLTQSQGWTIAIAAEAAELLRGLRVDYIEDLMGGAFRFHNPNASQTCGCGMAFRVS RS >UniRef50_Q4FWY4(40-168:221) Putative uncharacterized protein n=8 Tax=Trypanosomatidae RepID=Q4FWY4_LEIMA E=3e-12 s/c=0.56 id=21% cov=99% --SVSPRAWAQITRknseegftndARYLRLAIDSGGCHGYVYKFSFEKNDEfscEGDVaIAEVDAVspsdeaftgaqpspRVVVDTLSASKLANATLDYH SELKGSAFVVVgNELVDESCACAMSFSMRKT >UniRef50_Q2P1A3(1-101:199) Fe/S biogenesis protein nfuA n=19 Tax=root RepID=NFUA_XANOM E=2e-05 s/c=0.50 id=14% cov=57% ---------------------------------LEFAEPADLsgDEWAIDCDGFTLYVVAASVPWMDGAEIDYVtQSTGNQQLTIKAPKIKGE------- ----- >UniRef50_O96161(49-158:160) Iron-sulfur assembly protein, putative n=1 Tax=Plasmodium falciparum 3D7 RepID=O96161_PLAF7 E=1e-17 s/c=0.83 id=23% cov=98% IIQLTNDAINKMKEInlkyknsKALKVCVEAGGCSGFQYSFSLIDknKIKDKEQIVYDKDCIVVIDKQVIDILKNSKIHYINNLISKKFTIENiQNISSK CSCGNSFDI--- >UniRef50_Q11X17(25-100:105) Fe-S cluster formation protein n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11X17_CYTH3 E=1e-10 s/c=0.89 id=21% cov=75% -------ATKNIPEGYGLRVGVRGSGCSGTSFVLGF-DQKKDGDNEYLVEGLPVYIEKKHVLYVAGVELDYEDSEEVTGFIFN----------------- -- >UniRef50_Q056Z1(1-98:193) Fe/S biogenesis protein nfuA n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=NFUA_BUCCC E=1e-07 s/c=0.59 id=17% cov=86% MIKISKKAKKYIIKLLSkqelgtnIRIFVDSPGtmyaECGMAYC-DMNDIDKKNDHKFSFDFFDVYIHKLMLPFLKDSIIDLVKNDLGTKITLKAPYAK- ------------- >UniRef50_C6BS68(1-92:104) HesB/YadR/YfhF-family protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS68_DESAD E=6e-05 s/c=0.53 id=18% cov=83% MLKITEKAKEVLdqhfedKDKEPIRIYIAS-ACSGTRLALGIDSAK-EGDETINLEGYDFVVDEELLAQAKPMVIDLSPMGieISSSLVFEEEN------ ---------- >UniRef50_C4LAT5(1-100:116) Putative uncharacterized protein n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LAT5_TOLAT E=6e-07 s/c=0.56 id=19% cov=91% MIQIEESAltqlqrlqQQLVQECIGLRLIAKGDPCSGIKVDMGWTATQQPDDVLYRQSGLVFLADRRQWPLLKDCQISLAERQGQPGFNIQ-PQPANCGS C--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 2262 * 3717 534 * * * * * * 5333 * * 1 0 * * * * * * 6330 0 0 V 2 5986 * * * 4867 * * 1062 * 2209 4540 * * * * * * 2240 * * 2 0 * * * * * * 6784 0 0 E 3 4616 * 5087 3420 * * 5633 6129 2766 6342 * 4367 * 2709 4697 3045 1967 6550 * 6052 3 0 * * * * * * 6784 0 0 L 4 * * * * 3985 * * 1198 * 2017 4436 * * * * * * 2340 6595 * 4 0 * * * * * * 6794 0 0 T 5 * * * 5450 * * * * * * * * * * * 2682 284 * * * 5 0 * * * * * * 6801 0 0 P 6 4736 * 1964 1972 * 6727 * * 4058 6566 * 4921 1888 5500 6356 5511 6385 * * * 6 0 * * * * * * 6801 0 0 A 7 1922 6200 5590 4211 6427 6574 * 6378 2812 6642 * 2851 5892 * 3147 2772 5434 5421 * * 7 0 * * * * * * 6801 0 0 A 8 72 6438 * * * 6269 * * * * * * * * * * * 5366 * * 8 47 4969 * 3053 185 * * 6856 1573 0 I 9 1565 * * 4260 5321 * * 3054 4138 3435 * * * 3859 3932 6316 5192 3190 5636 6482 9 43 5074 * 2452 291 * * 6856 1606 0 Q 10 3038 * 3914 2470 * 5265 6120 * 2484 4739 * 3437 * 3212 3990 3661 5569 6420 * * 10 15 6558 * 2585 263 * * 6863 1000 0 E 11 3500 * * 2366 5302 * 3172 * 2403 5492 5210 5788 * 2947 2950 6804 * 5011 * 5277 11 0 * * * * * * 6863 0 0 L 12 5050 * * * 3949 * * 1433 * 1529 4718 6677 * * * 6650 * 2938 * * 12 66 4487 * 2583 263 * * 6863 2832 0 E 13 4799 6531 6409 3265 * 5990 5494 4724 1837 4766 6096 5649 5099 3828 2401 4554 4691 5130 * 6419 13 47 4978 * 2933 202 * * 6863 2052 0 R 14 3809 * 3680 2065 6510 4448 * * 2133 * * 4389 5097 4080 2965 5550 4596 * * * 14 29 5647 * 3196 167 * * 6863 1606 0 L 15 3958 5492 * * 5059 4706 5222 2567 4020 1668 3716 6314 * 4450 * 5548 4849 4645 * 4543 15 536 1687 * 2995 193 * * 6863 5495 0 Q 16 3476 * 6558 6680 * 6531 4752 4256 2182 2252 3372 * * 3869 6685 4445 5508 3871 * 4373 16 378 2118 * 2964 198 * * 6863 5207 0 I 17 2382 * * 5775 3688 1795 4939 4429 5639 4145 6334 6142 5844 * 6573 4416 6432 3715 * 3655 17 308 2379 * 2837 218 * * 6886 4826 0 L 18 * * * * 3953 * * 1696 * 970 6170 * * * * * * 3291 * * 18 21 6116 * 2807 222 * * 7084 1000 0 R 19 * * * * * * 4961 * 3306 * * * * * 362 6196 5230 5310 * 5413 19 20 6196 * 3170 170 * * 7084 1000 0 I 20 * * * * 5666 * * 1669 * 1500 5721 * * * * * * 1842 * 6133 20 0 * * * * * * 7084 0 0 Q 21 2796 6874 4834 7167 2818 2676 * 5773 4845 6753 5322 5064 * 5913 5617 3250 3231 3949 * 3708 21 20 * 6155 * * * * 7084 0 0 V 22 3169 * * * 5103 * * 2471 * 2816 * * 6499 5381 6786 5914 4200 1309 * 5740 22 0 * * * * 0 * 7061 0 1000 Q 23 3609 * 3108 3267 * 5295 * 4135 2298 4744 5752 4849 * 4329 3612 5176 3411 4323 * 5741 23 54 6507 5278 0 * * * 7084 1000 0 P 24 3537 6411 4912 4687 * 2296 7310 5741 2996 6446 * 4137 3605 4252 5734 2710 4496 4757 * 5631 24 77 5384 5144 4087 87 * 0 7038 1097 1647 S 25 3964 * 5720 5164 5726 1223 4884 5660 4231 6741 6243 * 4892 5552 3918 2881 4177 * * * 25 85 6373 4474 0 * 323 2316 7017 1000 2957 E 26 4033 * 5710 4135 * 303 * * * * * * 5486 * * 5467 * * * 7049 26 66 4936 6385 2000 415 668 1432 6847 1603 3015 C 27 5486 412 3930 3445 6253 6465 6343 * * * * * 5781 6157 * * * * * * 27 0 * * * * 516 1733 6925 0 1990 G 28 2501 4106 5392 4906 * 3001 4648 * 5129 6470 * 3919 6185 5906 * 1630 3931 * * 5772 28 51 * 4847 * * * 0 6963 0 1000 D 29 5463 * 4986 * * 223 * * * * * 6019 5885 6457 * 4475 * * * * 29 35 * 5398 * * 1005 995 6857 0 2545 W 30 5171 * * * 2007 5764 5468 4148 * 2641 3309 6575 3569 * * 5547 5130 3923 4943 3039 30 17 * 6441 * * 0 * 7160 0 2724 R 31 2960 * * 4985 5706 5921 * 6539 3541 5400 4977 3740 5867 2452 3492 2366 4138 4723 * * 31 20 * 6216 * * 0 * 7069 0 1000 Y 32 5473 * * * 3236 * 4228 * * 3287 * 6128 5263 6300 * * 6182 5800 * 665 32 0 * * * * * 0 7058 0 1000 D 33 3387 4661 3203 3280 4916 2611 5439 5665 3612 4111 * 4186 * 4753 7077 3841 4193 4572 * 6942 33 46 * 4984 * * 0 * 7058 0 1000 L 34 * * * * 2224 * * 3162 * 1533 2196 * 5697 * * * 6732 4080 6352 6603 34 18 * 6352 * * 1382 698 7077 0 1602 A 35 2466 6406 2743 3296 * 2851 6551 * 5074 4687 * 3568 * 4670 5060 3742 3931 4900 * 6523 35 38 6948 5814 1000 1000 736 1323 7101 1000 1840 L 36 * * * * 1774 6352 * 3069 * 1456 5408 * 5172 * * * 6443 3391 5859 4782 36 135 * 3483 * * 537 1686 7094 0 2123 V 37 2803 6764 2095 2878 4845 5204 * 4358 4795 6458 * 5199 5720 6365 6038 6081 3830 2638 * * 37 70 5077 5836 4054 90 136 3477 7163 1952 3955 A 38 3598 * 1777 2566 6810 5586 6657 5691 3884 * 6483 4455 4033 5900 5753 3271 3955 * * 6815 38 65 5328 5727 2026 407 568 1619 7245 2205 1983 E 39 2786 6378 4601 2239 * 5005 * 6162 2791 6799 * 3855 5910 3520 5157 3739 3840 4835 * 6540 39 82 5774 4750 1000 1000 0 * 7190 1629 1653 P 40 3135 * 4491 * 4780 4554 6099 3429 3683 4011 * 6608 2207 5034 4086 4224 3701 4085 * 6664 40 71 5701 5124 1998 416 594 1567 7080 1625 2114 K 41 4186 6030 4027 2599 * 3302 5646 * 2752 4913 * 2877 4872 4045 4407 5764 3823 6888 6203 6464 41 94 3990 * 2137 372 0 * 7102 3082 2675 P 42 4538 * 2675 1561 * 5465 5520 * 3767 3870 * 5380 2956 4931 6824 4481 6569 5301 * * 42 26 5806 * 525 1714 * * 7244 1739 0 T 43 5858 * 1965 4251 5486 2371 5598 * 3101 4629 * 2467 * 6407 * 3650 6866 * * * 43 0 * * * * * * 7244 0 0 D 44 6035 * 308 3440 * * 6438 4921 * * * * * * 6158 * 5249 * * * 44 14 6686 * 1585 585 * * 7244 1000 0 L 45 3813 5457 5983 3577 4932 7084 4273 3129 5067 3592 5557 4538 6192 3010 5654 4778 5003 2678 5839 5367 45 54 4763 * 892 1116 * * 7244 2489 0 L 46 3664 7005 * 4199 * 5573 5498 2433 3869 2991 * * * 6994 6850 5712 4359 1506 * * 46 14 6688 * 1000 1000 * * 7125 1000 0 T 47 3936 * 6835 6704 2101 * 6835 2932 6800 2714 4546 6783 * 6805 6611 6202 5191 2691 6231 3296 47 78 4911 5687 2473 286 * * 7125 2497 0 Q 48 5987 * 2897 1776 5687 7104 * 5884 3696 5908 * 3804 5842 4333 3965 4039 3216 5309 * 5368 48 50 5636 6182 537 1685 0 * 7237 1568 1663 S 49 4276 5869 4478 3394 3352 5092 6438 4478 4487 4782 * 6679 6050 3678 4186 2614 5345 3083 * 3992 49 38 5273 * 0 * 0 * 7116 1647 1000 Q 50 4330 6709 2200 3211 6510 3542 4301 5836 3938 5573 * 2355 7217 3716 * 3726 6656 * * * 50 28 5724 * 1798 489 * * 7125 1096 0 G 51 5494 * 3049 4094 6170 679 * * 4111 * * 3968 * * 6513 5199 * * * * 51 81 4202 * 2146 369 * * 7125 3157 0 W 52 3758 6897 * 5175 3508 7019 * 1959 * 2318 6060 6783 * 6397 * 6656 6164 2146 5331 5263 52 19 6229 * 3442 139 * * 7125 1480 0 T 53 6239 * 4648 3761 * 6513 6164 4707 2239 4453 * 4510 3683 4467 3072 3798 2848 4536 * 6314 53 14 6656 * 1000 1000 * * 7125 1000 0 I 54 5466 6204 5250 * 3242 * * 2655 * 1884 * * * * * * * 1387 * 5648 54 11 7069 * 1000 1000 * * 7125 1000 0 A 55 3052 6471 * 6640 2746 6530 4652 3078 * 3256 6889 * * 6015 5405 5598 6755 2178 * 2867 55 12 6861 * 1000 1000 * * 7125 1000 0 I 56 3614 5538 * * 4798 * * 1430 * 4622 3910 * * * * 6060 3978 1822 * 5561 56 13 6775 * 0 * * * 7125 1000 0 A 57 3819 * 1100 2975 * 5613 6170 6395 6704 5328 * 4599 4137 6604 6563 3532 6546 5108 * 6713 57 0 * * * * * * 7122 0 0 A 58 4442 6799 5004 2884 * * * * 2200 5079 * 3524 2392 4282 4044 3505 4597 * * 6358 58 0 * * * * * * 7122 0 0 E 59 3427 6778 4106 2280 * 5879 5484 5154 2368 4310 5705 4554 4934 4517 3646 4335 5394 6922 6199 6780 59 0 * * * * * * 7122 0 0 A 60 2756 4120 3622 4572 * * 4432 6470 * 3439 5371 6988 * 3822 * 1516 5440 4442 * * 60 0 * * * * * * 7122 0 0 A 61 2183 7006 * 5554 5123 * * 4004 5553 1653 4749 5647 6058 5055 5075 6830 4617 3453 5874 5036 61 0 * * * * * * 7122 0 0 E 62 3989 * 3016 3053 6519 4864 5560 6684 3796 3825 4026 4564 2326 5311 5290 4249 4659 5753 6704 * 62 30 5583 * 513 1741 * * 7122 1682 0 L 63 5367 * * 6511 2894 * * 3986 5863 2340 4238 6196 6395 4783 6012 6936 5905 3918 5764 1677 63 0 * * * * * * 7122 0 0 L 64 3774 6653 * * 5448 * * 3023 * 760 5810 * 6058 * * * 6604 2864 * * 64 0 * * * * * * 7122 0 0 R 65 4546 * 2398 3016 5905 5205 * 4114 2176 4679 6992 3588 * 5017 3570 4112 * * * 5791 65 0 * * * * * * 7122 0 0 G 66 5026 * 3154 4151 * 789 * * 5536 * * 3003 5414 * * 6059 6700 * 6058 6312 66 0 * * * * * * 7122 0 0 L 67 2839 4876 * * 6509 7045 * 3329 5772 2976 4273 6644 * 6843 * 2588 2362 2928 * * 67 28 5716 * 0 * * * 7128 1000 0 R 68 6857 5061 6715 3010 6828 * * 3647 4219 6014 5772 * * 4342 3754 5771 1574 2617 * 6517 68 0 * * * * * * 7128 0 0 V 69 * * 5716 * * 6705 * 1204 * 1633 5017 * 6042 * * * * 2567 * * 69 0 * * * * * * 7128 0 0 D 70 6354 * 190 6311 5716 * 5079 * * * * 6505 * * 6705 5095 * * * * 70 0 * * * * * * 7128 0 0 Y 71 5767 6433 * * 1687 * * 5711 * 4343 7070 * * * * * 6159 * 4275 949 71 51 4853 * 2446 293 * * 7107 1842 0 I 72 5139 * 4039 3736 5688 4624 5703 3024 5660 4969 6496 * * 4443 4533 3518 4621 1659 * 4750 72 46 4979 * 0 * * * 7051 2345 0 E 73 5267 * 2825 1514 * 6046 * 5769 3197 * 7074 4000 4713 5724 5119 4003 3669 4958 * 6452 73 43 5087 * 1408 682 * * 7051 2178 0 D 74 5712 * 1907 3549 * 3585 6251 * 4797 5348 4988 2612 5699 5001 4122 4044 3833 4716 * * 74 26 * 5821 * * * * 6956 0 0 L 75 5064 6472 2775 3469 * 2798 * 5994 6689 2021 5437 4490 3192 4800 5176 6419 6896 5455 6686 6187 75 34 5403 * 1640 558 * 0 6945 1774 1578 M 76 4630 * 6317 3713 4210 3140 * 3429 5039 2319 3129 4147 4774 5381 5994 4109 4753 5965 6686 6387 76 37 * 5315 * * * 0 6945 0 1578 G 77 5997 * 4131 4913 * 1405 5081 * 4107 * * 3270 6187 4100 3841 2846 5662 5859 * 7121 77 53 4803 * 0 * 1952 431 6909 2229 2559 G 78 3934 * 6594 3441 * 3078 * * 4286 * 6466 * 3828 4565 3361 1679 4271 5727 * 4102 78 73 4337 * 0 * 0 * 6924 2702 2195 A 79 4863 6021 * 4565 * 1167 6288 6491 3478 5928 * 5020 * 3927 3050 3855 5901 6487 * 5762 79 0 * * * * * * 6956 0 0 F 80 * * * * 287 * * 6147 * 2895 6510 * * * * * * 6487 * 6641 80 21 6097 * 0 * * * 6956 1000 0 R 81 4461 * * 5513 5563 * 5661 2489 2919 6023 6489 5205 * 4320 4393 * 2509 2128 * 5280 81 0 * * * * * * 6956 0 0 F 82 * * * * 1225 * * 1806 * 3086 5441 * * * * * * 3023 * 5482 82 70 4397 * 504 1762 * * 6953 2614 0 H 83 * * 2928 3988 * * 4547 4130 3384 6370 5329 2730 * 4152 3784 3300 3061 6801 * 3987 83 91 5799 4527 0 * * * 6885 1566 0 N 84 3967 * 5102 6148 5977 3973 6549 6213 6268 * 6071 709 5401 6041 4636 4178 6021 * * * 84 77 4766 6042 0 * 0 * 6754 1684 2261 P 85 4228 * * 4402 * * * 5240 4236 5866 * * 394 5701 * * 5477 * * * 85 57 6003 5451 1585 585 0 * 6824 1000 1000 N 86 6478 * 5147 6254 6356 * 6703 * 2912 5013 * 826 * 3515 4414 5026 * * * 4931 86 76 * 4277 * * 0 * 6732 0 1000 A 87 1210 * * 3602 5754 3907 5314 3794 * 5984 * * 4165 * * 4934 5505 2501 * * 87 49 * 4900 * * 1525 616 6748 0 2138 S 88 4558 * 5006 4101 * 3740 * 3271 2381 4259 * * 5234 3855 4854 3325 2616 4258 * * 88 30 5609 * 0 * 0 * 6566 1000 2517 Q 89 4355 * 4598 3908 * 3088 3990 * 3405 5813 5676 3117 * 4290 6546 1950 4367 6205 * 4916 89 0 * * * * * * 6593 0 0 T 90 4904 4123 * 4209 4123 4800 * 6149 3713 6142 * 4791 5437 4953 3311 2156 2724 3814 5771 * 90 0 * * * * * * 6281 0 0 C 91 * 116 * * * 4262 * * 5297 * * * * * * * * * * * 91 0 * * * * * * 6235 0 0 G 92 3987 * 4614 * * 823 * * 6282 * * * 4021 5762 * 2308 4794 * * * 92 0 * * * * * * 6082 0 0 C 93 * 78 * * * * 5080 * * * * * * * * 5425 * * * * 93 0 * * * * * * 5965 0 0 G 94 4667 * * * * 212 * * 5609 * * 5511 * * * 4183 * * * * 94 0 * * * * * * 5843 0 0 M 95 5339 5294 6017 2343 * * 5865 * 2881 * 4186 2404 * * 4937 2261 3333 * * * 95 0 * * * * * * 5678 0 0 A 96 3548 4987 * * * * * * * * * * * * * 180 * * * * 96 0 * * * * * * 5649 0 0 F 97 * * * * 94 * * * * * * * * * * * * * * 3985 97 0 * * * * * * 5514 0 0 R 98 5225 * 3465 4903 * 4082 4193 * * * 4017 2876 * 5082 4513 1733 2786 * * 5759 98 0 * * * * * * 5549 0 0 V 99 4923 * * * * * * 2187 * 3280 3902 * 4019 * * * 3036 1344 * * 99 0 * * * * * * 4698 0 0 S 100 2362 * * * * * 4647 * 1686 * * 4215 * 4945 4202 2814 2541 * * * 100 0 * * * * * * 4359 0 0 R 101 * * 1224 2352 * * * * 2764 * * * * 3785 2677 * * * * * 101 0 * * * * * * 3805 0 0 S 102 2094 * * * * * * * * * * * * * * 971 1967 * * * 102 0 * * 0 * * * 2406 0 0 //