HHsearch 1.5 NAME c1wxlA_ FAM FILE c1wxlA_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c1wxlA_.a3m DATE Sat Mar 13 14:50:44 2010 LENG 73 match states, 73 columns in multiple alignment FILT 108 out of 995 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.2 EVD 0.4767 1.1751 SEQ >ss_dssp CCCCCCCCCHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHTTTGGGTTCC >sa_dssp EEEDEECCECDDBABEDBCDCADEEDEECEEEDACECACECBEEDEDCEECCDCBDDBDEECCDDCECDEEEE >ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 9767999998999999999999998788898999999999984698669999999999999999938655349 >Consensus snxPKrPxsayxlfxxxxrxxxxxxxpxxxxxeiskxlgxxWxxlxekxxyxxxaxxxkxxyxxxxxxyxxqx >c1wxlA_ SHMPKRATTAFMLWLNDTRESIKRENPGIKVTEIAKKGGEMWKELKDKSKWEDAAAKDKQRYHDEMRNYKPEA >UniRef50_D0MUR0(347-412:496) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MUR0_PHYIN E=4e-08 s/c=0.90 id=22% cov=89% -NRPPKPVNTFLMFCRQNRKKIMADHPATSAKDASKILGDMWQKLSEKERasYIPMTEMENQRRMNE-------- >UniRef50_B0CXQ5(443-518:564) Predicted protein n=4 Tax=Agaricales RepID=B0CXQ5_LACBS E=1e-08 s/c=0.80 id=20% cov=96% -NAPKKPLSAYFMFLQRIRanPQLVREifGEETETTKQSVLAAAKWRSMTdgERQPFLAQAEQEKMEYEAARRLYE--- >UniRef50_UPI000186DCCA(185-242:391) conserved hypothetical protein n=1 Tax=Pediculus humanus corporis RepID=UPI000186DCCA E=1e-05 s/c=0.89 id=21% cov=78% --------TAYMMWAKEIRQELNKQYPDMDFTTMARRLSELWGTVpnSERELWRRKAKREAAKKQK--------- >UniRef50_B0D8X7(18-92:449) HMG-box DNA-binding protein n=2 Tax=Agaricomycetes RepID=B0D8X7_LACBS E=2e-09 s/c=0.85 id=20% cov=97% -HAP-RPPNAWIIYRSEKTKMITARaagQPPPPQGMVSKMISAMWKDEPaaTRAIYERRADEKKAEHQKQYPGYRFQ- >UniRef50_C1G3N4(949-1029:1088) Lysine-specific histone demethylase n=1 Tax=Paracoccidioides brasiliensis Pb18 RepID=C1G3N4_PARBD E=4e-05 s/c=0.61 id=19% cov=92% ----KKPLNPFLLYQKDYWHICKTKcnearrastgnaNAKAPREEIRQALGQMWRDAPEdiRQPYIDQICEHRRENDESLEKWK--- >UniRef50_Q4H2N5(114-186:789) Transcription factor protein n=1 Tax=Ciona intestinalis RepID=Q4H2N5_CIOIN E=8e-07 s/c=0.75 id=19% cov=99% -DYPKRPLTPYFRFFMEKRDSFATQHKDLTNLEVTAELSKIYRSLPQKQkeKYVQDWKKETAEYKVYMKKFREE- >UniRef50_Q4T6E6(555-628:659) Chromosome undetermined SCAF8803, whole genome shotgun sequence n=3 Tax=Tetraodontidae RepID=Q4T6E6_TETNG E=7e-09 s/c=0.84 id=21% cov=78% ----KKPLNAFMVFMREHRPfideEVKRKGNGVVNMHLAQTVGLLGAGQEQQAIYYQEAERQRQ------------- >UniRef50_UPI00005A5B1D(72-128:319) PREDICTED: similar to Epidermal Langerhans cell protein LCP1 n=1 Tax=Canis lupus familiaris RepID=UPI00005A5B1D E=2e-06 s/c=0.94 id=21% cov=77% ---------------KKQKAAIKGQNPNATFGDVSKIVASVWDSLgeEQKQVCKRKTEAAKKEYLKALAAYK--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 327 2303 * * * 1 0 * * * * * * 4106 0 0 H 2 * * 2031 * * * 2620 * 4836 * * 928 * * * 4958 * * * * 2 0 * * * * * * 5918 0 0 M 3 1709 * * 5523 * 5269 5019 4468 3085 5399 2315 * 4216 * 4480 * * 3577 * 4457 3 0 * * * * * * 6213 0 0 P 4 5550 * * * * * * * * * * * 31 * * * * * * * 4 41 * 5155 * * * * 6848 0 0 K 5 6096 * * 4482 * * * * 571 * * * 3892 4805 2848 6420 6184 * * * 5 0 * * * * 0 * 7188 0 1677 R 6 6391 * * * * 4667 * 6783 1741 * 6978 * 4674 5761 923 * 5483 5303 * * 6 15 * 6552 * * * * 7267 0 0 A 7 3875 * * * * * * * 5645 6186 * 4343 363 * 5118 5508 6815 6426 * * 7 13 6749 * 0 * * 0 7257 1000 1000 T 8 4724 4486 6492 * * 6521 * 4873 3591 1984 2867 * 2798 5052 3190 6050 6955 3609 * * 8 0 * * * * 0 * 7252 0 1000 T 9 4261 6603 * * * 5604 * * * * * 1811 6824 6625 5776 1655 1851 * * * 9 0 * * * * * * 7379 0 0 A 10 1142 6136 * * * 3017 5696 * 5814 * * * 2251 * * 3314 4877 5183 * * 10 0 * * * * * * 7379 0 0 F 11 6185 6518 * * 1352 * * * * 6495 * * * 5628 * * * * 4201 1006 11 0 * * * * * * 7379 0 0 M 12 3705 * * * 2951 * * 2078 * 2601 2620 4159 * 4501 * 4549 5875 4057 6708 * 12 0 * * * * * * 7379 0 0 L 13 5048 5925 * 6886 3615 * 4262 3034 5601 1269 3842 * * 5122 4473 5743 7177 4200 6278 5884 13 14 6740 * 2000 415 * * 7384 1000 0 W 14 * * * * 766 * * * * * 6468 * * * * * * * 3827 1599 14 15 6632 * 2807 222 * * 7384 1000 0 L 15 3028 3561 * * 2879 6948 * 5159 4803 4589 3067 * * 4488 3411 3466 7062 3043 * 3919 15 0 * * * * * * 7384 0 0 N 16 4376 6728 4289 6726 * 6656 * 6554 2214 5282 4403 2951 * 2704 2735 3867 4233 5804 * * 16 0 * * * * * * 7380 0 0 D 17 4319 * 2327 1785 * * 3574 * 4071 * 6558 6231 * 4244 4962 3507 3164 6862 * * 17 0 * * * * * * 7380 0 0 T 18 4409 5701 * 3946 4705 * 3646 3580 3118 5853 3280 3858 * 3822 3479 5544 4509 3979 6637 3980 18 18 6333 * 0 * * * 7380 1000 0 R 19 * * * * 5167 * 5142 5675 4476 4005 6717 4894 * 4286 839 6899 5084 5584 4094 4430 19 21 6101 * 1665 546 * * 7380 1680 0 E 20 2860 6940 3191 3179 * 6136 5480 6950 2664 * 6476 4825 2783 3638 5408 4630 3848 5933 * 6667 20 42 5113 * 1681 539 * * 7380 1756 0 S 21 3897 * 4380 2536 * 4424 * 4045 2610 6899 5228 4960 * 3184 4263 3560 5188 3713 6130 6728 21 54 5882 5653 2153 367 * * 7380 1670 0 I 22 4429 4758 * * 3974 6260 4075 2242 * 2619 4482 * * * * 6812 6722 1816 * 4074 22 28 5678 * 2720 237 * 0 7346 1759 1691 K 23 4060 6499 6454 5681 * 5600 5785 6467 1455 3597 5060 5585 * 4877 2554 4894 4347 3995 * * 23 0 * * * * 0 * 7346 0 1691 R 24 2418 * 5358 2652 6282 4783 5044 6407 2304 * * 6507 5811 3779 3974 3186 4265 6870 * * 24 22 7238 6899 1585 585 * * 7380 1000 0 E 25 4157 * 3683 2011 * 6817 * 6832 2818 4498 5204 5711 * 2523 4322 3326 5675 6653 6067 * 25 148 3530 6525 1998 416 0 * 7376 4027 1000 N 26 6134 5582 6610 5168 5156 2847 2274 * * 4918 5293 1785 * 5006 5111 5137 * * * 3109 26 91 4606 5657 2961 198 * 0 7362 2792 1000 P 27 5004 6099 4973 4238 * 4643 * 6820 3643 6900 * 5620 713 5624 5106 4900 6796 * * 6651 27 36 5353 * 1000 1000 610 1537 7366 2255 2262 G 28 5617 * 2280 3054 * 2187 4834 6401 3962 * * 2733 5824 4339 6934 6047 4616 5074 * 6460 28 143 3771 5563 1909 447 0 * 7378 3609 1000 I 29 2573 4970 * 5851 * 6710 6115 3309 3778 2326 2595 * 5655 5471 6491 * 4329 3646 5968 5582 29 44 5055 * 2337 318 0 * 7346 2279 1695 K 30 5745 * 4158 3485 * 5245 4485 5864 3545 * 6457 3625 3467 4082 4826 1761 3840 5636 * * 30 103 4072 6690 1929 440 * * 7380 3588 0 V 31 3736 * * 5620 2362 * 3942 6564 4905 3503 4560 2687 4459 3838 6494 5112 4001 3486 * 6942 31 14 6685 * 1000 1000 0 * 7371 1000 1000 T 32 2919 * 5553 4642 6726 3313 7066 * 3467 5167 5135 3264 5146 3958 3804 3743 3235 3790 6633 6558 32 28 5722 * 1776 498 * * 7380 1680 0 E 33 3843 * 2283 1506 * 5839 4949 * 4846 * 6807 6476 * 2790 5744 4819 4420 5468 * * 33 15 6637 * 1000 1000 * * 7380 1000 0 I 34 5501 6471 * * 3451 * * 1809 * 2685 4554 * * 4528 5596 * 6858 1648 * * 34 0 * * * * * * 7380 0 0 A 35 2652 5531 * * * 5546 * 7236 5676 5773 3810 4669 * 5487 4461 1427 2480 5385 * * 35 16 6522 * 1000 1000 * * 7380 1000 0 K 36 4573 6558 5676 5518 * 5999 6878 6554 1374 6174 * 6865 * 4059 2129 4461 4135 3795 * * 36 0 * * * * * * 7380 0 0 K 37 3547 * 5122 3054 5654 * 5902 2673 3120 2667 3754 * * 4705 4468 5166 4860 3880 6421 * 37 0 * * * * * * 7380 0 0 G 38 3191 3674 * * * 5705 * 2290 * 1552 5671 * 6817 * * 4932 5639 2590 * * 38 0 * * * * * * 7380 0 0 G 39 2418 * * * * 1009 5681 * 6350 * * 6717 * 5487 * 2181 5410 6924 * * 39 11 7035 * 2000 415 * * 7380 1000 0 E 40 3225 * 3847 2453 6690 7035 6903 6305 2881 5480 6136 4278 6696 3401 3120 3441 5112 5055 * 6903 40 0 * * * * * * 7380 0 0 M 41 4382 6476 5603 3294 * 6577 6421 5301 2472 2828 3102 6572 * 3614 3287 4056 6728 4531 5993 6633 41 13 * 6817 * * * * 7380 0 0 W 42 * * * * 6302 6318 * * * * * * * * * * * * 157 3681 42 0 * * * * 0 * 7381 0 1000 K 43 3473 * 6330 5584 * 6060 5504 * 1892 5515 6464 3248 6136 4080 1915 3607 6471 * * * 43 12 6862 * 1000 1000 * * 7380 1000 0 E 44 2955 * 3640 3038 * 5496 * * 3843 4355 4392 2868 * 3157 5579 2647 4651 6466 * * 44 36 5352 * 1000 1000 * * 7380 2260 0 L 45 5682 * * 4168 5634 * 6043 4650 * 947 1992 * * 5542 * 6407 7039 4692 * * 45 408 2022 * 1000 1000 * * 7380 5779 0 K 46 6594 * 3323 2393 * 5077 * * 5695 * * 6350 2415 6305 * 1657 3202 * * 6333 46 450 1901 * 1000 1000 * * 7380 6060 0 D 47 5148 * 2319 1022 * * 7049 * 4132 * * 6471 4846 3200 * 6654 4693 6513 * * 47 316 2345 * 1000 1000 * * 7380 5740 0 K 48 6656 * 5222 3622 * * * 6941 969 6585 * * 6231 4762 1846 6130 6665 * * * 48 32 5515 * 2306 326 * * 7380 2256 0 S 49 2858 * 5002 2298 * 5650 5590 6554 2159 6448 * 5837 * 2013 6832 4178 6421 * * * 49 82 4180 * 1000 1000 * * 7380 3043 0 K 50 * 6862 * 4440 4680 5623 5576 4734 2301 5170 * 4997 2112 3587 3488 5084 6701 3642 * 4551 50 157 3400 6950 1000 1000 * * 7380 4428 0 W 51 * 5973 * 6147 2627 * * 6755 6441 6939 5052 * * * * * * 6226 2601 809 51 12 6886 * 1000 1000 0 * 7383 1000 1000 E 52 4601 * 4879 2523 4696 * 4653 3380 2866 4804 5835 3636 * 3358 4047 * 4941 3921 * 4354 52 0 * * * * * * 7380 0 0 D 53 3484 * 2641 2110 * 6992 5076 4945 3614 6508 6585 5083 6585 2885 3388 6140 5665 4609 * * 53 0 * * * * * * 7380 0 0 A 54 3625 6457 5127 2955 5093 * * 5330 2603 2725 4233 5636 6350 3523 2597 * * 6013 6136 6333 54 0 * * * * * * 7380 0 0 A 55 909 6297 * 5028 5499 4832 4991 6427 * * * * * 6694 * 3323 4433 6676 6810 2743 55 20 6213 * 1000 1000 * * 7367 1000 0 A 56 3029 6496 4396 1883 * * 4586 6903 2408 4444 5740 4679 * 3441 4150 6333 5887 5916 * 6448 56 12 6858 * 1585 585 * * 7380 1000 0 K 57 4395 6701 4142 2129 6944 * 6832 3763 2474 3713 5843 6174 * 3665 3171 6464 5945 4889 * 5131 57 20 6174 * 1000 1000 * * 7380 1000 0 D 58 3048 6585 2310 2222 * * 5586 4770 4403 3319 5069 4206 * 3963 6464 4548 * 5483 * 5426 58 0 * * * * * * 7380 0 0 K 59 4861 * * 5374 5953 * * 5433 1416 4013 3617 5064 * 3645 2202 6622 5111 6746 * 6896 59 0 * * * * * * 7380 0 0 Q 60 2430 6471 5011 1929 * 5511 * 6295 2874 5133 6182 5123 6765 3178 3170 * * 4768 * * 60 0 * * * * * * 7358 0 0 R 61 4130 * 3936 2273 * * 6562 4713 3474 3906 5738 5037 * 3187 2029 6534 4840 6017 * * 61 15 6562 * 0 * * * 7314 1000 0 Y 62 5718 * * * 3111 * 3086 * 6890 6842 6472 5008 * 6129 6556 * * 5213 4774 738 62 0 * * * * * * 7314 0 0 H 63 4438 * 3944 2444 5894 * 3927 * 2172 3318 4807 3726 * 3421 5174 5089 7057 5817 * 6223 63 0 * * * * * * 7325 0 0 D 64 3878 * 5082 2450 * 6592 * 5351 2314 3732 * 4579 * 3256 2862 4940 4741 4208 * * 64 0 * * * * * * 7316 0 0 E 65 2762 * 4248 1519 * * * 4866 2806 4532 * 6364 6564 3256 3944 5627 6876 * * 6736 65 0 * * * * * * 7200 0 0 M 66 * * * * 4747 * 3989 3932 3051 2433 1754 4971 * 5745 4686 * 5348 4429 * 3806 66 21 6112 * 2807 222 * * 7217 1000 0 R 67 2603 * 4839 2678 * * 6206 * 3262 6478 6308 5095 2493 3510 2982 4068 6587 6467 * * 67 0 * * * * * * 7217 0 0 N 68 2923 * 2985 2418 * 4276 5479 4700 2769 5094 6015 3806 * 3862 6465 4664 4476 6072 * * 68 0 * * * * * * 7091 0 0 Y 69 * * * 6251 2904 * 6270 * * * * 6517 * 6203 * * 5865 * 2957 578 69 0 * * * * * * 7028 0 0 K 70 5050 * * 3077 * * 5123 6231 1719 4290 5996 4985 * 3428 2021 5214 * 4608 * * 70 0 * * * * * * 6892 0 0 P 71 1514 * 5497 4686 5402 * 5375 5283 3059 * * 5765 3379 3600 5586 3269 * * * 3760 71 0 * * * * * * 6517 0 0 E 72 * * 4942 2252 * * * * 3351 * * * * 663 5164 * * * * * 72 0 * * * * * * 5930 0 0 A 73 647 * * * * * * * * * * * * * * 1469 * * * * 73 0 * * 0 * * * 3836 0 0 //