HHsearch 1.5 NAME c1w70A_ FAM FILE c1w70A_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c1w70A_.a3m DATE Tue Mar 9 05:48:16 2010 LENG 60 match states, 60 columns in multiple alignment FILT 107 out of 2584 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.8 EVD 0.4502 1.2101 SEQ >ss_dssp CCCSCEEEESSCBCCSSTTBCCBCTTCEEEEEEECSSSEEEEEETTEEEEEEGGGEEECC >sa_dssp ECEEDDACADEEBECEDEECADBDDDCDAEBCDEDDEECBCACBEEDDBCABCECBDDCE >ss_pred CCEEEEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCEEEEEECCEEEEEC >ss_conf 950269999504068888671173898899999468986999989978999701189959 >Consensus xxxxxxxxalxxyxxxxxxeLsfxxGdxixvlxxxxxxWxxgxxxgxxGxvPxxyvxxie >c1w70A_ LIKHMRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILK >UniRef50_C4QJR3(36-95:572) Sorting nexin, putative n=2 Tax=Schistosoma RepID=C4QJR3_SCHMA E=5e-10 s/c=1.09 id=20% cov=98% -VSKSQVRVIYDFIAQWNGELTVSTGEELTITNQnVGSGWWQAVNEfGKEGLIPSEFVEII- >UniRef50_C3YQI0(436-492:596) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YQI0_BRAFL E=1e-09 s/c=1.12 id=22% cov=97% --ERILAKTVSSYKPPGDGGLTLEVDDIVEVLHKGTDGWWYGFSRGTVGLFPASSVQVI- >UniRef50_UPI0001793719(1500-1550:3216) PREDICTED: similar to myosin light chain kinase, partial n=1 Tax=Acyrthosiphon pisum RepID=UPI0001793719 E=1e-06 s/c=1.07 id=16% cov=83% --------AIRSYIAENEDALDLVEGEKVYVIESNNQDWWFVKkhLTEEKGWVPSIYLR--- >UniRef50_B0D2P7(1323-1382:1964) Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D2P7_LACBS E=5e-12 s/c=1.20 id=20% cov=102% VVQPTKAKAIYAYETNSTDEYSFDEGDELAIVDKSDAEWWKTEHNGVVLIVPAAYLEDVE >UniRef50_UPI0001924575(38-103:356) PREDICTED: similar to predicted protein, partial n=2 Tax=Hydra magnipapillata RepID=UPI0001924575 E=6e-08 s/c=0.89 id=24% cov=98% -VRERKFVALYDYDPftmgttDRPDlQLSLTKGDKITVIGDIDvDGYYTAIKKGARYLVPSNFVKEV- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * 2249 * 888 3690 * * * * * * 2541 * * 1 0 * * * * * * 4343 0 0 I 2 * * * * * * * 2177 * 1977 2939 * * * * 4481 * 1516 * * 2 0 * * * * * * 5056 0 0 K 3 4955 * * 3271 * * 5354 * 2582 * * 4227 4612 2018 1921 3890 * * * * 3 0 * * * * * * 5536 0 0 H 4 * * * 4025 * 4306 3214 * 4311 5228 * 2385 4234 2981 2291 * 2969 * * * 4 0 * * * * * * 5983 0 0 M 5 * * 5273 * 5571 4893 5508 4565 3802 2072 2783 5223 * 5588 2878 5759 5300 2731 * 5485 5 0 * * * * * * 6070 0 0 R 6 5324 6089 6483 3552 4905 * * 5783 2011 4266 5418 * * 2786 1735 6502 5964 * * 5930 6 18 6343 * 2322 322 * * 6537 1000 0 A 7 1292 3535 * * 6365 4572 * 6136 * 5689 6076 * 6129 * * * * 1453 * 5422 7 0 * * * * * * 6714 0 0 E 8 * * * 3699 * * * 4153 1798 6629 * * * 3695 1929 * 4439 2575 * 6011 8 19 * 6261 * * * * 6812 0 0 A 9 687 6621 * * * 6021 6803 5642 * * * * * * * 4738 3530 2320 * * 9 15 * 6601 * * * 0 6898 0 1000 L 10 5046 5871 6485 5575 * 6024 4765 2530 3733 1451 4139 6713 * 5573 6241 5022 4665 3580 * * 10 11 7105 * 1000 1000 1000 1000 6896 1000 1646 F 11 4742 4941 * 5339 2637 * 3200 * 5077 * 5610 6216 * 4881 5049 5036 5237 4818 4745 1402 11 47 4977 * 1211 816 0 * 6907 2315 1000 D 12 3198 * 1426 3741 * 5423 5735 * 4536 * * 3534 3464 * * 2831 5103 * * 6352 12 13 6758 * 0 * * * 6914 1000 0 F 13 * 5268 * * 1330 * 5390 * * 5844 * 4780 * * 5820 * * 6273 5009 1195 13 19 6282 * 1000 1000 * * 6933 1000 0 T 14 4201 4704 2861 2713 5977 * 7247 4464 3667 5230 7112 3563 * 3743 5895 4246 3325 3210 * * 14 12 6888 * 0 * * * 6944 1000 0 G 15 1720 * * 6344 * 2741 * * 4968 * * 4731 2253 6942 6215 2643 3996 6516 * * 15 23 5958 * 1715 524 * * 6944 1728 0 N 16 4071 5052 3176 2918 * 4689 5589 6997 3703 6666 * 4243 5188 3391 3704 3097 3287 4958 * 6706 16 71 4377 * 809 1220 * * 6944 2706 0 S 17 4918 * 2635 3386 6770 2987 6650 5580 4828 4372 6239 3321 * 6717 4193 2969 3469 4646 7160 5778 17 0 * * * * * * 6944 0 0 K 18 3550 6563 2259 2479 6080 4585 * 5460 4388 * * 5236 2498 4233 5430 3593 6115 6423 * * 18 27 5778 * 0 * * * 6944 1119 0 L 19 5476 5600 2227 2677 6422 2956 4989 * 5788 5778 6857 3196 * 4278 4951 4052 3360 6837 * 6570 19 40 5182 * 1827 478 * * 6944 2068 0 E 20 5730 6052 2571 1086 5716 5103 4804 * 4857 5396 * 6570 * 3685 6080 5341 4695 * * 5793 20 19 6288 * 0 * * * 6944 1000 0 L 21 6666 * * * * * * 2770 * 483 4419 * * * * * * 3897 * 6115 21 0 * * * * * * 6944 0 0 N 22 3928 7005 4732 4511 * 4693 6754 6830 4846 * 6066 3824 4795 5270 4700 1321 2579 * * * 22 0 * * * * * * 6944 0 0 F 23 6865 * * * 1135 * * 3290 * 1897 4484 * * * * * * 3052 * * 23 0 * * * * * * 6944 0 0 K 24 4462 5721 3809 3742 6892 7005 4107 5174 2308 4317 5560 4285 4883 3673 3752 3277 4202 5722 * * 24 0 * * * * * * 6944 0 0 A 25 3592 * 5102 2395 * 6506 * 5569 2376 * 6606 * 3210 3552 3272 4881 4278 3636 * * 25 0 * * * * * * 6944 0 0 G 26 6626 * 3765 6587 * 342 * * 5263 * * 3773 * * * 6658 * * * 6942 26 0 * * * * * * 6944 0 0 D 27 4545 * 878 2137 * * * * * * * 6014 * 2982 * 6717 5606 6215 * * 27 0 * * * * * * 6944 0 0 V 28 5058 * 5177 3109 5556 * 6697 2318 3726 3580 5715 6521 7237 4714 4765 4794 3954 2505 * 4387 28 0 * * * * * * 6944 0 0 I 29 6506 6344 * * 4296 * * 1488 * 2114 5876 * * * * * * 1778 6770 5610 29 0 * * * * * * 6944 0 0 F 30 4488 6722 3835 3161 3806 6549 5016 3553 3883 3457 * 5979 * 4634 4504 4445 2949 4064 6343 4075 30 33 5474 * 351 2212 * * 6944 2302 0 L 31 5324 6072 5046 5408 * * 6864 2029 * 2792 * * * * * * 6650 1041 * 6344 31 0 * * * * * * 6944 0 0 L 32 5177 4951 5466 6046 5175 * 5897 2623 * 1402 4976 * * * 5615 5260 3479 3525 * 4007 32 12 * 6857 * * * * 6944 0 0 S 33 4776 6487 3413 1902 6284 3502 5979 * 3839 * * 3898 5206 3968 4026 3112 5292 6340 * 5002 33 43 5086 * 2160 365 0 * 6944 2252 1000 R 34 5280 5679 3513 3170 6367 6430 4950 4042 2287 6619 4694 6550 5454 3195 3411 5082 4069 5023 6288 5959 34 28 6229 7367 0 * * * 6944 1690 0 I 35 5917 * 3076 4363 6856 3872 4377 4186 4955 4641 4976 3553 3379 4276 5960 3060 4301 3151 * * 35 201 3052 6751 1051 950 0 * 6948 4581 1000 N 36 6517 6714 1840 3231 * 5010 5474 * 4669 6855 6673 2750 4554 3682 6843 2823 4170 7005 * * 36 152 3323 * 1234 798 0 * 6940 4019 1000 K 37 4164 6973 2207 3287 6521 2916 6510 * 3634 * 6734 2928 4541 5725 6574 3076 5065 5590 * * 37 101 4052 7033 1592 582 * * 6944 3204 0 D 38 5619 * 2406 2958 6856 1345 5604 * 5912 * 6918 3261 * 5533 * 4853 * 6417 4998 6512 38 58 4665 * 918 1087 0 * 6944 2649 1000 W 39 * * * * 6080 * * * * 4613 5660 * * 6706 5778 * 6273 4549 319 4668 39 0 * * * * * * 6944 0 0 L 40 4245 5557 * * 3727 * * 4742 * 2758 4907 * * 5208 * * 4236 4615 1228 3574 40 0 * * * * * * 6944 0 0 E 41 6563 * * 3072 4990 6080 4845 4803 2604 3200 5634 6465 * 3771 3717 5354 4626 4770 3569 3136 41 12 6867 * 2000 415 * * 6944 1000 0 G 42 2443 4066 * * * 1052 * 4789 * * * * * 6514 6550 5589 5292 2557 * * 42 81 4196 * 1808 485 * * 6944 3152 0 T 43 5067 5045 6706 2440 4703 5623 5810 4447 2925 7012 5578 5123 * 3051 2765 4906 3912 4609 6574 5998 43 41 5150 * 775 1267 * * 6944 2088 0 V 44 5955 3655 5722 * 5343 6606 3998 3473 3414 2888 * 2819 * 5585 3764 3578 5922 3209 * 5344 44 340 2250 * 958 1043 * * 6944 5236 0 R 45 4657 * 2923 4513 6706 2934 4310 * 3104 5696 6066 2210 * 5709 4156 4774 3232 * * 6790 45 120 3649 * 480 1821 * * 6944 4033 0 G 46 5860 * 3745 3566 * 908 * * 5139 6465 * 2703 6510 5336 5721 4839 * * * 6994 46 125 3793 6521 1870 461 * * 6944 3935 0 A 47 4443 5962 5452 2841 * 5745 4622 6287 2258 5674 * 4584 * 2893 2682 4132 4776 4344 * * 47 12 6906 * 1000 1000 0 * 6927 1000 1000 T 48 4414 5785 6430 2390 4707 6066 * 4349 3621 6722 6626 4785 6521 3762 3298 3621 3900 2919 6288 6215 48 23 5970 * 601 1553 * * 6944 1714 0 G 49 * * 6526 * * 67 * * * 6115 * * 6535 * * * * * * 6771 49 0 * * * * * * 6944 0 0 I 50 6650 6814 * * 2535 * * 3068 5177 2008 4515 * * * 5627 5839 6273 5162 3176 2473 50 16 6535 * 0 * * * 6944 1000 0 F 51 4595 5178 * * 1343 * * 2882 * 5517 * * * * * * * 1450 * 6239 51 0 * * * * * * 6944 0 0 P 52 6367 * * * 6312 * 5422 * 5485 6423 * * 182 6343 * 6321 6422 * * * 52 0 * * * * * * 6944 0 0 L 53 2376 5074 7163 6574 4962 4063 5310 4358 3639 4298 * * 6430 * 3529 2169 4347 4195 * 4687 53 0 * * * * * * 6944 0 0 S 54 3113 5505 5720 5674 * 5299 4832 5346 5359 * * 1855 6066 4786 6510 1920 3346 6239 * * 54 0 * * * * * * 6944 0 0 F 55 5922 5123 * * 2135 * 3487 * * 4516 5738 * * * 5479 6887 6217 5433 * 977 55 0 * * * * * * 6957 0 0 V 56 6683 6495 * * 6240 * * 2368 * 2140 * * * * * * 4457 1001 * * 56 18 6373 * 0 * * * 6909 1000 0 K 57 6518 * 4272 1458 * * 4926 * 2531 * * 6074 * 2885 2968 4873 4177 * * * 57 0 * * * * * * 6863 0 0 I 58 5385 * 5675 3335 4084 * * 2092 5433 2396 5482 * 3155 * 4736 * * 2596 * 6254 58 0 * * * * * * 6786 0 0 L 59 * 5924 * * * * * 1938 * 1487 4736 * * * * * * 1759 * 4933 59 0 * * * * * * 6543 0 0 K 60 * * * 905 * * * * 1873 * * * * 3086 3731 * * * * * 60 0 * * 0 * * * 5437 0 0 //