Return to main results Retrieve Phyre Job Id

Job DescriptionOrphan___
Confidence76.67%DateSun Sep 7 17:02:59 BST 2014
Rank16Aligned Residues36
% Identity22%Templatec3qu1B_
PDB info PDB header:hydrolase, metal binding proteinChain: B: PDB Molecule:peptide deformylase 2; PDBTitle: peptide deformylase from vibrio cholerae
Resolution1.80 Å
Model Dimensions (Å)X:33.073 Y:26.040 Z:27.604

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80........
Predicted Secondary structure 














Query SS confidence 




































Query Sequence  SCKVTIYNRGSRESRVTAPKGWAATAVHQAFDHCEGK
Query Conservation 




































Alig confidence 

















.

















Template Conservation   
 
 
 
  
       . 
  

  






 
 
Template Sequence  SVVVEALDREGKPLRIET. SDFLAIVMQHEIDHLSGN
Template Known Secondary structure 
TTS
.
STTT
Template Predicted Secondary structure 




.


Template SS confidence 




































   106...110.........120... ......130.........140.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in JSmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D