34 c4ciuA_ Probab=99.63   E-value=2.8e-14  Score=116.96  Aligned_columns=179  Identities=12%

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHH
Q ss_conf             667777522200025541089999999999865552147778963899976898878899
Q Good_intensive   79 NVRWLSIQSKRFAPLYAVEAKRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVA  138 (329)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~r~~p~~vll~GpPG~GKT~l  138 (329)
                      ....+..........+......+..+...+............+|.++||+||||||||++
T Consensus       365 ~~~~l~~~~~~l~~~v~gq~~~~~~i~~~i~~~~~~~~~~~~~~~~iLL~GPpG~GKT~L  424 (657)
T c4ciuA_         365 EREKLLRXEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTEL  424 (657)
T ss_dssp             HHHHHHTHHHHHHHHSCSCHHHHHHHHHHHHHHHHTCSCTTSCSEEEEEESCSSSSHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHH
T ss_conf             777777676532200288589999999999998725766676763899953986158999


Q ss_pred             HHHHHHHH---HHCCCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf             99999998---6104862687638589956644857899999983105799085420038
Q Good_intensive  139 TNLIARAI---AERENTSTYSLPPDPSHFDGYKQQGVVIMDDLNQNPDGADMKLFCQMVS  195 (329)
Q Consensus       139 a~~lA~~l---~~~~~~~~~~~~~~~~~~~~y~g~~v~~~d~~~~~~~~~~~~~~~~~id  195 (329)
                      |++||+.+   +..+.....+...++.....+.|.+-.+...+.+.+   ++++|+||+|
T Consensus       425 AkaLA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~alr~~~---~~vi~lDei~  481 (657)
T c4ciuA_         425 CKALANFXFDSDEAXVRIDXSEFXEKHSVSRLVGAGGYLTEAVRRRP---YSVILLDAVE  481 (657)
T ss_dssp             HHHHHHHHHSSSSSEEEEEGGGCCSHHHHHHTTCCCCHHHHHHHHCS---SCEEEEESGG
T ss_pred             HHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHCCHHHHHHHHHHCC---CCEEEEECHH
T ss_conf             99999863377787312463330430023455145068999997068---9899982317


Q ss_pred             HHHHHHHHH-----------CCCCCCCCCCCEEEEEEECC--------------------
Q ss_conf             567326530-----------20125766676179997088--------------------
Q Good_intensive  196 TVEFIPPMA-----------SLEEKGILFTSNYVLASTNS--------------------  224 (329)
Q Consensus       196 ~~~~~~~m~-----------~~~~k~~~~~~~~vi~ttN~--------------------  224 (329)
                      ..+-...-+           +..+....+...++|+|+|.                    
T Consensus       482 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  541 (657)
T c4ciuA_         482 KAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIXTSNLGSDLIQERFLDYAHXKELVL  541 (657)
T ss_dssp             GSCHHHHHHHHHHHHHSEEECTTSCEEECTTCEEEEEESTTHHHHHTCCCCTTTHHHHHH
T ss_pred             HCCHHHHHHHHHHHCCCEEECCCCEEECCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHH
T ss_conf             759688998741102763514798063122158882345561233444301221014444


Q ss_pred             ---CCCCCHHHCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHC
Q ss_conf             ---002884435936764002036772379857699999987400
Q Good_intensive  225 ---SRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMAMAT  266 (329)
Q Consensus       225 ---~~~~~~~l~~~~A~~RR~~~~i~v~~~~~~~~~~~l~~~~~~  266 (329)
                         +..+.|      .|..||+..+.+++++...+.++++..+..
T Consensus       542 ~~~~~~~~~------~~~~r~~~~i~f~~~~~~~~~~I~~~~l~~  580 (657)
T c4ciuA_         542 GVVSHNFRP------EFINRIDEVVVFHPLGEQHIASIAQIQLKR  580 (657)
T ss_dssp             HHHHHHCCH------HHHHHSSEEEECCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCH------HHHHHCCEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             554530476------788405818980899989999999999999


