Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence97.04%DateSun Sep 7 16:58:53 BST 2014
Rank293Aligned Residues115
% Identity8%Templatec2j37W_
PDB info PDB header:ribosomeChain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs
Resolution8.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120. ........130.........140.........150........
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Query Sequence  IQKLEHTINNYIQFKSKHRIE. . PVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLP
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Template Sequence  QHAVFKELVKLVDPGVKAWTPTKGNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICA
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   76...80.........90.........100.........110.........120.........130.....
 
   159160.........170.........180.........190.........200.........210........
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Query Sequence  PDPSHFDGYKQQGVVIMDDLNQNPDGADMKLFCQMVSTVEFIPPMASLEEKGILFTSNYV
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Template Sequence  . . . . . . DTFRAGAFDQLKQNATKAR. . . IPFYGSYTEMDPVIIASEGVEKFKNENFEIII
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   138.140.........150...... ...160.........170.........180........
 
   219220....
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Query Sequence  LASTNS
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Template Sequence  VDTSGR
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   189190....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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