Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence97.95%DateSun Sep 7 16:58:53 BST 2014
Rank125Aligned Residues134
% Identity17%Templatec3vkhA_
PDB info PDB header:motor proteinChain: A: PDB Molecule:dynein heavy chain, cytoplasmic; PDBTitle: x-ray structure of a functional full-length dynein motor domain
Resolution3.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140 .........150.........160.........170...... .
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Query Sequence  LLVHGSPGTGKSVATN. LIARAIAERENTSTYSLPPDPSHFDGYKQQGVVIMD. . . . . . D
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Template Sequence  LILCGPPGSGKTMTLTSTLRAFPDFEVVSLNFSSATTPELLLKTFDHHCEYKRTPSGETV
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   2670.........2680.........2690.........2700.........2710.........2720.........
 
   178.180.........190....... ..200.........210.... .....
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Query Sequence  LNQNPDGADMKLFCQMVSTV. . . . . . . . EFIPPMASLEEKGILFT. . . . . . . . . . SNYVL
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Template Sequence  LRPTQLGKWLVVFCDEINLPSTDKYGTQRVITFIRQMVEKGGFWRTSDHTWIKLDKIQFV
Template Known Secondary structure  SSTT
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   2730.........2740.........2750.........2760.........2770.........2780.........
 
   220...... ...230.........240.........250.........260.....
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Query Sequence  ASTNSSR. . . . . ISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMAMA
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Template Sequence  GACNPPTDAGRVQLTH. . . . . . RFLRHAP. ILLVDFPSTSSLTQIYGTFNR
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   2790.........2800..... ....2810.. .......2820.........2830...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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