Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence99.31%DateSun Sep 7 16:58:53 BST 2014
Rank61Aligned Residues172
% Identity13%Templatec2hcbC_
PDB info PDB header:replicationChain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus
Resolution3.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130.........140.........150.........160....
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Query Sequence  EHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLPPDPSHF
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Template Sequence  RLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSS. . ADDFA
Template Known Secondary structure  TTTTTTTS


SSSSSTT

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   95....100.........110.........120.........130.........140....... ..150..
 
   165....170.........180.........190........ .200.........210.........220
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Query Sequence  DGYKQQGVVIMDDLNQNPDGADMKLFCQMVSTVE. . . . FIPPMASLEEKGILFTSNYVLA
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Template Sequence  QAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILA
Template Known Secondary structure  T

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GGGGTT
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   153......160.........170.........180.........190.........200.........210..
 
   221........230.........240.........250 .........260.........270.........
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Query Sequence  STNSSRISPPTVAHSDALARRFAFDMDIQV. MNEYSRDGKLNMAMATEMCKNCHQPANFK
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Template Sequence  SDRHPQKLDGVSD. . . RLVSRFEGGILVEIELDNKTRFKIIKEKLKEFNLELRKEVIDYL
Template Known Secondary structure  SS
GGG
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   213......220..... ....230.........240.........250.........260.........
 
   280.
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Query Sequence  RC
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Template Sequence  LE
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   270.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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