Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence99.66%DateSun Sep 7 16:58:53 BST 2014
Rank31Aligned Residues207
% Identity15%Templated1lv7a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   97..100.........110.........120.........130.........140.........150......
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Query Sequence  EAKRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYS
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Template Sequence  GCDEAKEEVAELVEYLREPSRFKI. PKGVLMVGPPGTGKTLLAKAIAGEAKVPF. . . . FT
Template Known Secondary structure  S
T
GGG


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   159160.........170.........180.. .......190.........200.........210. ..
 
   157..160.........170.........180.........190...... ...200
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Query Sequence  LPPDPSHFDGYKQQGVVIMDDLNQNPDGADMKLFCQMVST. . . . . . . . . . . . . . . . VEFI
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Template Sequence  ISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTL
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S
SSTTS




TT
STTT


STTS

TT
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   219220.........230.........240.........250.........260.........270........
 
   201........210.........220.........230.........240.........250.........260
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Query Sequence  PPMASLEEKGILFTSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKL
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Template Sequence  NQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPG. . . . RFDRQVVVGLPDVRGREQIL
Template Known Secondary structure  T

SSS
S
TTTS
GGGGSTT....SS





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   279280.........290.........300.........310.... .....320.........330....
 
   261........270.........280 .........290.........300.........310..
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Query Sequence  NMAMATEMCKNCHQPANFKR. . . . . . . . CCPLVCGKAIQLMDKSSRVRYSIDQITTMIIN
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Template Sequence  KVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDK
Template Known Secondary structure  TTS
B
TT

T
TT

TT
SSB
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   335....340.........350.........360.........370.........380.........390....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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