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Job DescriptionGood_intensive
Confidence99.52%DateSun Sep 7 16:58:53 BST 2014
Rank38Aligned Residues204
% Identity11%Templatec4d2qC_
PDB info PDB header:chaperoneChain: C: PDB Molecule:clpb; PDBTitle: negative-stain electron microscopy of e. coli clpb2 mutant e432a (bap form bound to clpp)
Resolution18.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140...... ...150.....
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Query Sequence  KRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAI. . . AERENTSTY
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Template Sequence  EAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFXFDSDEAXVRIDX
Template Known Secondary structure  TT
S
TTS
S
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TTSSSSSSSS

T
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   575....580.........590.........600.........610.........620.........630....
 
   156...160.........170.........180.........190.........200....
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Query Sequence  SLPPDPSHFDGYKQQGVVIMDDLNQNPDGADMKLFCQMVSTVEFIPPMA. . . . . . . . . . .
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Template Sequence  SEFXEKHSVSRLVGAGGYLTEAV. . . RRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLT
Template Known Secondary structure  TTT
SGGGGGGTTTSS
S...S
S



TTSS
TS
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   635....640.........650....... ..660.........670.........680.........690.
 
   205....210.........220.........230.... .....240.......
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Query Sequence  SLEEKGILFTSNYVLASTNSSRISPPTVAH. . . . . . . . . . . . . . . . . SDALARRFAFDMD
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Template Sequence  DGQGRTVDFRNTVVIXTSNLGSDLIQERFLDYAHXKELVLGVVSHNFRPEFINRIDEVVV
Template Known Secondary structure 
TTS


TT


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STTTTTS
TT
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   701........710.........720.........730.........740.........750.........760
 
   248.250.........260.........270.........280.........290.........300.......
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Query Sequence  IQVMNEYSRDGKLNMAMATEMCKNCHQPANFKRCCPLVCGKAIQLMDKSSRVRYSIDQIT
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Template Sequence  FHPLGEQHIASIAQIQLK. . . . . . . . . . . . . . . . . . . . . . RLYKRLEERGYEIHISDEAL
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   763......770.........780 .........790.........800
 
   308.310... ......320.......
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Query Sequence  TMIINE. RNRRSNIGNCMEAL
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Template Sequence  KLLSENGYDPVYGARPLKRAI
Template Known Secondary structure  T

TTT
ST
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   801........810.........820.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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