Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence97.35%DateSun Sep 7 16:58:53 BST 2014
Rank241Aligned Residues40
% Identity28%Templatec2xzlA_
PDB info PDB header:hydrolase/rnaChain: A: PDB Molecule:atp-dependent helicase nam7; PDBTitle: upf1-rna complex
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.........150.........160.....
Predicted Secondary structure 











Query SS confidence 







































Query Sequence  LVHGSPGTGKSVATNLIARAIAERENTSTYSLPPDPSHFD
Query Conservation 

 



 


 

  

  
                   
Alig confidence 







































Template Conservation 










 

  

  
      



 



 


Template Sequence  LIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVD
Template Known Secondary structure 
STTSS


SS
Template Predicted Secondary structure 












Template SS confidence 







































   427..430.........440.........450.........460......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D