Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence99.39%DateSun Sep 7 16:58:53 BST 2014
Rank49Aligned Residues172
% Identity15%Templated1gvnb_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Plasmid maintenance system epsilon/zeta, toxin zeta subunit
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150
Predicted Secondary structure 















Query SS confidence 



























































Query Sequence  APLYAVEAKRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERE
Query Conservation            
                 
  
  


 



 


 

  

  
    
Alig confidence 






















































.....
Template Conservation                   

            
  


 







 

  

  .....
Template Sequence  ANIVNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEE. . . . .
Template Known Secondary structure 

TT


TT



SS


TTS
T.....
Template Predicted Secondary structure 





















.....
Template SS confidence 



























































   2.......10.........20.........30.........40.........50......
 
   151........160..... .... 170.........180.........190
Predicted Secondary structure 



...

.................





Query SS confidence 














. . .



. . . . . . . . . . . . . . . . .




















Query Sequence  NTSTYSLPPDPSHFD. . . GYKQ. . . . . . . . . . . . . . . . . QGVVIMDDLNQNPDGADMKLF
Query Conservation                 ... 
 
.................  
   
              
Alig confidence 














...



.................




















Template Conservation       
 
  
                              
   

  
          
Template Sequence  TQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIE
Template Known Secondary structure  TTT


TTTSTTGGG
T


Template Predicted Secondary structure 













Template SS confidence 



























































   57..60.........70.........80.........90.........100.........110......
 
   191........200.........210.... .....220.........230.........240..
Predicted Secondary structure 












........












Query SS confidence 























. . . . . . . .



























Query Sequence  CQMVSTVEFIPPMASLEEKGILFT. . . . . . . . SNYVLASTNSSRISPPTVAHSDALARRF
Query Conservation     

       
     
     ........   

 


        
    
  

 
Alig confidence 























........





















....

Template Conservation                     
                
 



    
 
  
 
....

Template Sequence  GTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTA. . . . RA
Template Known Secondary structure 




STTT




TTT
....

Template Predicted Secondary structure 























....

Template SS confidence 



























































   117..120.........130.........140.........150.........160.........170 ..
 
   243......250.........260.........270..
Predicted Secondary structure 











Query SS confidence 





























Query Sequence  AFDMDIQVMNEYSRDGKLNMAMATEMCKNC
Query Conservation     
 
           
            
Alig confidence 






.





















Template Conservation         .         
         
  
Template Sequence  TPKQAHD. IVVKNLPTNLETLHKTGLFSDI
Template Known Secondary structure 

.T

S
Template Predicted Secondary structure 






.







Template SS confidence 





























   173...... 180.........190.........200.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D