Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence99.63%DateSun Sep 7 16:58:53 BST 2014
Rank34Aligned Residues179
% Identity12%Templatec4ciuA_
PDB info PDB header:chaperoneChain: A: PDB Molecule:chaperone protein clpb; PDBTitle: crystal structure of e. coli clpb
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100.........110.........120.........130........
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Query Sequence  NVRWLSIQSKRFAPLYAVEAKRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVA
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Template Sequence  EREKLLRXEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTEL
Template Known Secondary structure  TS
S
T
S
TTS
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   555....560.........570.........580.........590.........600.........610....
 
   139140...... ...150.........160.........170.........180.........190.....
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Query Sequence  TNLIARAI. . . AERENTSTYSLPPDPSHFDGYKQQGVVIMDDLNQNPDGADMKLFCQMVS
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Template Sequence  CKALANFXFDSDEAXVRIDXSEFXEKHSVSRLVGAGGYLTEAVRRRP. . . YSVILLDAVE
Template Known Secondary structure  SSSSSGGG

STT




S...S
SGG
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   615....620.........630.........640.........650.........660. ........670.
 
   196...200.... .....210.........220....
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Query Sequence  TVEFIPPMA. . . . . . . . . . . SLEEKGILFTSNYVLASTNS. . . . . . . . . . . . . . . . . . . .
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Template Sequence  KAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIXTSNLGSDLIQERFLDYAHXKELVL
Template Known Secondary structure  GS
S
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TT
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TTT
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   681........690.........700.........710.........720.........730.........740
 
   225....230.........240.........250.........260......
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Query Sequence  . . . SRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMAMAT
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Template Sequence  GVVSHNFRP. . . . . . EFINRIDEVVVFHPLGEQHIASIAQIQLKR
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   743......750. ........760.........770.........780.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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