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Job DescriptionGood_intensive
Confidence98.05%DateSun Sep 7 16:58:53 BST 2014
Rank119Aligned Residues127
% Identity14%Templatec3vkhB_
PDB info PDB header:motor proteinChain: B: PDB Molecule:dynein heavy chain, cytoplasmic; PDBTitle: x-ray structure of a functional full-length dynein motor domain
Resolution3.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140 .........150.........160.........170.... ...
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Query Sequence  LLVHGSPGTGKSVATN. LIARAIAERENTSTYSLPPDPSHFDGYKQQGVVI. . . . . . MDD
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Template Sequence  LILCGPPGSGKTMTLTSTLRAFPDFEVVSLNFSSATTPELLLKTFDHHCEYKRTPSGETV
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   2670.........2680.........2690.........2700.........2710.........2720.........
 
   178.180.........190.........200.........210..
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Query Sequence  LNQNPDGADMKLFCQMVSTVEFIPPMASLEEKGIL. . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LRPTQLGKWLVVFCDEIN. . . . . . . LPSTDKYGTQRVITFIRQMVEKGGFWRTSDHTWIK
Template Known Secondary structure  SSTTSSTT.......
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   2730.........2740....... ..2750.........2760.........2770.........2780..
 
   213......220..... ....230.........240.........250.........260.....
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Query Sequence  FTSNYVLASTNSS. . . . . RISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMAMA
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Template Sequence  LDKIQFVGACNPPTDAGRVQLTH. . . . . . RFLRHAPI. LLVDFPSTSSLTQIYGTFNR
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   2783......2790.........2800..... ....2810... ......2820.........2830...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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