Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence97.82%DateSun Sep 7 16:58:53 BST 2014
Rank148Aligned Residues139
% Identity9%Templatec3dmdA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40... ......50.........60.........70......
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Query Sequence  EWVSNKISKFIDWLKEKIIPQARDK. . LEFVTKLRQLEMLENQISTIHQSCPSQEHQEIL
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Template Sequence  GKLREKLKSFVKRVEEEVEKEEEEVELTVEIKEKDVDKALDELEIDLLEADVALEVVDAL
Template Known Secondary structure  TT




TTT

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   3......10.........20.........30.........40.........50.........60..
 
   77..80.........90.........100.........110....... ..120........
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Query Sequence  FNNVRWLSIQSKRFAPLYAVEAKRIQKLEHTINNYIQFKSK. . . . . . . . HRIEPVCLLVH
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Template Sequence  REKIKQKLVG. KKVRIGTDKGKIIEEAVKEAVSEILETSRRIDLIEEIRKAEKPYVIMFV
Template Known Secondary structure  TT.
TTS
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   71........80 .........90.........100.........110.........120.........
 
   129130.........140.........150........
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Query Sequence  GSPGTGKSVATNLIARAIAERENTSTYSLP
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Template Sequence  GFNGSGKTTTIAKLANWLKNHGFSVVIAAS
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   130.........140.........150.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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