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Job DescriptionGood_intensive
Confidence99.03%DateSun Sep 7 16:58:53 BST 2014
Rank89Aligned Residues210
% Identity13%Templatec1hqcB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:ruvb; PDBTitle: structure of ruvb from thermus thermophilus hb8
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120.........130.........140.........150.........160.
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Query Sequence  QKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLPPDP
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Template Sequence  ERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEK.
Template Known Secondary structure  SS
S






TT

T


TTT

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   18.20.........30.........40.........50.........60.........70......
 
   162.......170.........180.........190..... ....200...
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Query Sequence  SHFDGYKQQGVVIMDDLNQNPDGADMKLFCQMVS. . . . . . . . . . . . . . . . . . TVEFIPPM
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Template Sequence  . . . . . . . . . . PGDLAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQG
Template Known Secondary structure  ..........TT

TT
TTTTS

S

BSSS
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   77..80.........90.........100.........110.........120......
 
   204.....210.........220.........230.........240.........250.........260...
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Query Sequence  ASLEEKGILFTSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMA
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Template Sequence  PAARTIRLELPRFTLIGATTRPGLITA. . . . . . PLLSRFGIVEHLEYYTPEELAQGVMRD
Template Known Secondary structure  SS
B





SS
SS
S
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   127..130.........140.........150... ......160.........170.........180
 
   264.....270.........280 .........290.........300.........310.....
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Query Sequence  MATEMCKNCHQPANFKR. . . . . . . . CCPLVCGKAIQLMDKSSRVRYSIDQITTMIINERN
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Template Sequence  ARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGL
Template Known Secondary structure  TTS

B
S
S
TTTSS
SSSS
B
T
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   181........190.........200.........210.........220.........230.........240
 
   316...320........
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Query Sequence  RRSNIGNCMEALF
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Template Conservation      
       
Template Sequence  DELGLEKRDREIL
Template Known Secondary structure 
TT


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   241........250...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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