Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence99.41%DateSun Sep 7 16:58:53 BST 2014
Rank46Aligned Residues183
% Identity9%Templated1qvra3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.......
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Query Sequence  NNVRWLSIQSKRFAPLYAVEAKRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSV
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Template Sequence  GEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTE
Template Known Secondary structure 
SS
S
GGG
S
SSS
SBS
SSSS
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   544.....550.........560.........570.........580.........590.........600...
 
   138.140.........150.........160.........170... ......180.........190......
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Query Sequence  ATNLIARAIAERENTSTYSLPPDPSHFDGYKQQGVV. IMDDLNQNPDGADMKLFCQMVST
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Template Sequence  LAKTLAATLFDTEEAMIRID. . . . . . MTEYMEKHAVSRLQLTEAVRRRPYSVILFDEIEK
Template Known Secondary structure  SSGGG
......TTT

SSGGGGG


SSSSGGG
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   604.....610.........620... ......630.........640.........650.......
 
   197..200.... .....210.........220.........230...
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Query Sequence  VEFIPPMA. . . . . . . . . . . SLEEKGILFTSNYVLASTNSSRISPPTVA. . . . . . . . . . . .
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Template Sequence  AHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDE
Template Known Secondary structure  S
TTT

SSS


TT

TTTT

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   672.......680.........690.........700.........710.........720.........730.
 
   234.....240.........250.........260......
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Query Sequence  . . . . . . . . HSDALARRFAFDMDIQVMNEYSRDGKLNMAMAT
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Template Sequence  VFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSY
Template Known Secondary structure  TTS
T
SB

B




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   732.......740.........750.........760.........770..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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