Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence98.72%DateSun Sep 7 16:58:53 BST 2014
Rank103Aligned Residues160
% Identity14%Templated1ny5a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140.........150........
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Query Sequence  KRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLP
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Template Sequence  PKMKEILEKIKKISCAEC. . . . . . . PVLITGESGVGKEVVARLIHKLSDRSKEPFVALNV
Template Known Secondary structure  TT

S.......

STTSSSTTTTS
T
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   144.....150.........160. ........170.........180.........190......
 
   159160 .........170... ......180.........190..... ....200....
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Query Sequence  PD. . . . . . . PSHFDGYKQQGVV. IMDDLNQNPDGADMKLFCQMVS. . . . . . TVEFIPPMA
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Template Sequence  ASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIE
Template Known Secondary structure  TTS

B
TTSSTT

S
B

TTTSSGGG

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   197..200.........210.........220.........230.........240.........250......
 
   205 ....210.........220.........230.........240.........250........
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Query Sequence  S. . . . . . LEEKGILFTSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDG
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Template Sequence  SGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVIEIEIPPLRERKED
Template Known Secondary structure  S

BT

S



SS
TTSS
TT


GGG
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   257..260.........270.........280.........290.........300.........310......
 
   259260.....
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Query Sequence  KLNMAMA
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Template Sequence  IIPLANH
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   317..320...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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