Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence98.44%DateSun Sep 7 16:58:53 BST 2014
Rank112Aligned Residues158
% Identity13%Templatec2c99A_
PDB info PDB header:transcription regulationChain: A: PDB Molecule:psp operon transcriptional activator; PDBTitle: structural basis of the nucleotide driven conformational2 changes in the aaa domain of transcription activator pspf
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140......... 150.....
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Query Sequence  KRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAER. . . ENTSTY
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Template Sequence  NSFLEVLEQVSHLAPLDK. . . . . . . PVLIIGERGTGKELIASRLHYLSSRWQGPFISLNC
Template Known Secondary structure  TTS
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   13......20.........30 .........40.........50.........60.....
 
   156...160.........170... ......180.........190.........200........
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Query Sequence  SLPPDPSHFDGYKQQGVV. IMDDLNQNPDGADMKLFCQMVSTVEFIPPMASLEE. . . . . .
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Template Sequence  AALNENLLDSELFGHEAKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELERV
Template Known Secondary structure  GGS

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   66...70.........80.........90.........100.........110.........120.....
 
   209210.........220.........230.........240.........250.........260...
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Query Sequence  . . . KGILFTSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMA
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Template Sequence  GGSQPLQVNVRLVCATNADLPAMVNEGTFRADLLDRLAFDVVQLPPLRERESDIMLMA
Template Known Secondary structure  SSS




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   133......140.........150.........160.........170.........180.........190
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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