Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence99.51%DateSun Sep 7 16:58:53 BST 2014
Rank39Aligned Residues194
% Identity11%Templatec3sylB_
PDB info PDB header:chaperoneChain: B: PDB Molecule:protein cbbx; PDBTitle: crystal structure of the aaa+ protein cbbx, native structure
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.........150. ....
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Query Sequence  AKRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAEREN. . TSTY
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Template Sequence  KDRIRETAALLLVERARQKLGLTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHL
Template Known Secondary structure  TT







TTSSTTS
SS

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   40.........50.........60.........70.........80.........90.........
 
   156...160.........170.........180.........190..... ....200....
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Query Sequence  SLPPDPSHFDGYKQQGVVIMDDLNQNPDGADMKLFCQMVS. . . . . . . . . . . TVEFIPPMA
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Template Sequence  VSVTRDDLVGQYIGHTAPKTKEVLKRAMGG. . VLFIDEAYYLYRPDNERDYGQEAIEILL
Template Known Secondary structure 
GGGT

SSTTSSTTS..TGGGG

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   103......110.........120.........130.. .......140.........150.........160
 
   205....210.........220.........230.........240.........250.........260....
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Query Sequence  SLEEKGILFTSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMAM
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Template Sequence  QVMENNRDDLVVILAGYADRMENFFQSNP. . . GFRSRIAHHIEFPDYSDEELFEIAGHML
Template Known Secondary structure  SS
TT

ST...TSTTT





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   161........170.........180......... 190.........200.........210.......
 
   265....270........ .280.........290......
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Query Sequence  ATEMCKNCHQPANF. . . . . . . . . . . . . . . . KRCCPLVCGKAIQLMDKS
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Template Sequence  DDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANR
Template Known Secondary structure  TT

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T
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   218.220.........230.........240.........250.........260.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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