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Job DescriptionGood_intensive
Confidence99.36%DateSun Sep 7 16:58:53 BST 2014
Rank53Aligned Residues162
% Identity17%Templatec3pxgA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca121 and clpc1-485 complex
Resolution3.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.........150.........160.........170... ....
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Query Sequence  RIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLPPDPSHFDGYKQQGVV. IMDD
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Template Sequence  RRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVP. . . . . . . . EILRDKRVMTLEDRLKKV
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   198.200.........210.........220.........230. ........240.........
 
   178.180.........190.........200.........210.........220.........230.......
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Query Sequence  LNQNPDGADMKLFCQMVSTVEFIPPMASLEEKGILFTSNYVLASTNSSRISPPTVAHSDA
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Template Sequence  MDEIRQAGNIILFID. . . . . . . . . . . . . . . AKPSLARGELQCIGATTLDEYRKYIEKDAA
Template Known Secondary structure  T




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   265....270......... 280.........290.........300.........
 
   238.240.........250.........260.........270.........280.........290.......
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Query Sequence  LARRFAFDMDIQVMNEYSRDGKLNMAMATEMCKNCHQPANFKRCCPLVCGKAIQLMDKSS
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Template Sequence  LERRFQP. IQVDQPSVDESIQILQGLRDRYEAHHRVSIT. . . . . . DDAIEAAVKLSDRYI
Template Known Secondary structure  S.




TTTTSGGGSS
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   330...... ...340.........350.........360....... ..370.........380..
 
   298.300.........310
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Query Sequence  RVRYSIDQITTMI
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Template Sequence  SDRFLPDKAIDLI
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   383......390.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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