Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence98.74%DateSun Sep 7 16:58:53 BST 2014
Rank100Aligned Residues212
% Identity11%Templatec1w5sB_
PDB info PDB header:replicationChain: B: PDB Molecule:origin recognition complex subunit 2 orc2; PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form)
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140.........150........
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Query Sequence  KRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLP
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Template Sequence  GEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVK
Template Known Secondary structure  T



TT

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   2930.........40.........50.........60.........70.........80........
 
   159160.........170.........180..... ....190.....
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Query Sequence  PDPSHFDGYKQQGVVIMDDLNQNPDGA. . . . . . . . . . . . . . . . . . . . . . . DMKLFCQMVS
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Template Sequence  QAYVNAFNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQ
Template Known Secondary structure  GGG

ST




TT

T
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   8990.........100.........110.........120.........130.........140........
 
   196...200.........210.........220.........230.........240....
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Query Sequence  . . . . . . . . . . . TVEFIPPMASLEEKGILFTSNYVLASTNSSRISPPTVAHSDALARRFAF
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Template Sequence  SMLSSPRIAAEDLYTLLRVHEEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVESQIGF
Template Known Secondary structure  S
TTS
TS

TTS
T
TT
S
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   149150.........160.........170.........180.........190.........200........
 
   245....250.........260.........270.........280..... ...
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Query Sequence  DMDIQVMNEYSRDGKLNMAMATEMCKNCHQPANFKRCCPLV. . . . . . . . . . . . . . . . CGK
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Template Sequence  KLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISDVYGEDKGGDGSARRAIVALKM
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B
GGG


GGGTS


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   209210.........220.........230.........240.........250.........260........
 
   289290.........300.........310
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Query Sequence  AIQLMDKSSRVRYSIDQITTMI
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Template Sequence  ACEMAEAMGRDSLSEDLVRKAV
Template Known Secondary structure  GGGT
SS

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   269270.........280.........290
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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