Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence99.60%DateSun Sep 7 16:58:53 BST 2014
Rank35Aligned Residues153
% Identity9%Templatec1nsfA_
PDB info PDB header:protein transportChain: A: PDB Molecule:n-ethylmaleimide sensitive factor; PDBTitle: d2 hexamerization domain of n-ethylmaleimide sensitive factor (nsf)
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110..... ....120.........130.........140.........150.......
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Query Sequence  KRIQKLEHTINNYIQFK. SKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSL
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Template Sequence  DPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPF. . . . IKI
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   512.......520.........530.........540.........550.........560.... ...
 
   158.160.........170... ......180.........190........ .200...
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Query Sequence  PPDPSHFDGYKQQGVV. IMDDLNQNPDGADMKLFCQMVSTVE. . . . . . . . . . . . . FIPPM
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Template Sequence  CSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALL
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   568.570.........580.........590.........600.........610.........620.......
 
   204.....210.........220.........230.........240.........250.........260
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Query Sequence  ASLEEKGILFTSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKL
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Template Sequence  VLLKKAPPQGRKLLIIGTTSRKDVLQE. . . . . MEMLNAFSTTIHVPNIATGEQLLEA
Template Known Secondary structure  TT


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   628.630.........640.........650.... .....660.........670.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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