Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence99.20%DateSun Sep 7 16:58:53 BST 2014
Rank78Aligned Residues207
% Identity9%Templated1fnna2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120.........130.........140.........150.........160.
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Query Sequence  QKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLPPDP
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Template Sequence  QQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFI
Template Known Secondary structure  STTSS



TTSSTTS


TTT
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   23......30.........40.........50.........60.........70.........80..
 
   162.... ...170.........180. ........190..... ....
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Query Sequence  SHFDG. . . . . . . . . . . . . . . . YKQQGVVIMDDLNQN. . PDGADMKLFCQMVS. . . . TVEF
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Template Sequence  YRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILS
Template Known Secondary structure 

STT



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TGGGS
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   83......90.........100.........110.........120.........130.........140..
 
   200.........210.........220.........230.........240.........250.........
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Query Sequence  IPPMASLEEKGILFTSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGK
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Template Sequence  TFIRLGQEADKLGAFRIALVIVGHNDAVLN. . NLDPSTRGIMGKYVIRFSPYTKDQIFDI
Template Known Secondary structure  TT
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SST..TS
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B
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   143......150.........160.........170.. .......180.........190.........200
 
   260.........270.........280.... .....290.........300
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Query Sequence  LNMAMATEMCKNCHQPANFKRCCPL. . . . . . . . . . . . . . . . . . . VCGKAIQLMDKSSRVR
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Template Conservation 
                    
              
  
    

  
   
       
Template Sequence  LLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKH
Template Known Secondary structure  B
TTSS
SBSSTT
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   201........210.........220.........230.........240.........250.........260
 
   301........310
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Query Sequence  YSIDQITTMI
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Template Sequence  IAPEDVRKSS
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   261........270
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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