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Job DescriptionGood_intensive
Confidence99.78%DateSun Sep 7 16:58:53 BST 2014
Rank26Aligned Residues204
% Identity13%Templatec2qz4A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:paraplegin; PDBTitle: human paraplegin, aaa domain in complex with adp
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   97..100.........110.........120.........130.........140.........150......
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Query Sequence  EAKRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYS
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Template Sequence  GMHEAKLEVREFVDYLK. . SPEAKVPKGALLLGPPGCGKTLLAKAVATEAQVPF. . . . LA
Template Known Secondary structure  S
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   313......320......... 330.........340.........350.........360.... ..
 
   157..160.........170.........180.........190.........200.........210......
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Query Sequence  LPPDPSHFDGYKQQGVVIMDDLNQNPDGADMKLFCQMVSTVEFIPPMASLEEKGILFTSN
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Template Sequence  MAGAEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIEQTLNQLLVEMDGM. . GTTDHV
Template Known Secondary structure  TTTTSSSSTTT
S


T
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   373......380.........390.........400.........410.........420.... .....430
 
   217..220.........230.........240.........250.........260.........270....
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Query Sequence  YVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMAMATEMCKNCHQ. .
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Template Sequence  IVLASTNRADILDGALMRPG. . . . RLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFY
Template Known Secondary structure  S
GGGGGSGGGSTT....S



S

TT

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   450.........460......... 470.........480.........490.........500.....
 
   275....280.........290.........300.........310.......
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Query Sequence  . . . . . . . . PANFKRCCPLVCGKAIQLMDKSSRVRYSIDQITTMIINERNRR
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Template Sequence  SQRLAELTPGFSGADIANICNEAALHVHTLN. . . . . FEYAVERVLAGTAKK
Template Known Secondary structure  T
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T


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   506...510.........520.........530...... ...540.........550.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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