Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence95.63%DateSun Sep 7 16:58:53 BST 2014
Rank411Aligned Residues140
% Identity16%Templatec2iuuE_
PDB info PDB header:membrane proteinChain: E: PDB Molecule:dna translocase ftsk; PDBTitle: p. aeruginosa ftsk motor domain, hexamer
Resolution2.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150. ........160.........170.
Predicted Secondary structure 








...





.........
Query SS confidence 



























. . .



















. . . . . . . . .
Query Sequence  CLLVHGSPGTGKSVATNLIARAIAEREN. . . TSTYSLPPDPSHFDGYKQQG. . . . . . . . .
Query Conservation   


 



 


 

  

  
     ...               
 
  .........
Alig confidence 



























...



















.........
Template Conservation 





 





  
 


 

     
  
 
 




  

     



   
 

Template Sequence  HLLVAGTTGSGKSVGVNAMLLSILFKSTPSEARLIMIDPKMLELSIYEGIPHLLCPVVTD
Template Known Secondary structure  S

TTSSTT

TTT
SSSSGGGGGTT
TTBSSS
B
S
Template Predicted Secondary structure 





















Template SS confidence 



























































   461........470.........480.........490.........500.........510.........520
 
   172.......180.
Predicted Secondary structure  ..................................................
Query SS confidence  . . . . . . . .









. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . VVIMDDLNQN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ........
   
     ..........................................
Alig confidence  ........









..........................................
Template Conservation         
  
  

 

  

   

  
  

                          
Template Sequence  MKEAANALRWSVAEMERRYRLMAAMGVRNLAGFNRKVKDAEEAGTPLTDPLFRRESPDDE
Template Known Secondary structure  T
SSTT


B
TT


SSSS

Template Predicted Secondary structure 























Template SS confidence 



























































   521........530.........540.........550.........560.........570.........580
 
   182.......190..... ....200.........210.........220....... ..
Predicted Secondary structure  ....







......















..

Query SS confidence  . . . .













. . . . . .































. .

Query Sequence  . . . . PDGADMKLFCQMVS. . . . . . TVEFIPPMASLEEKGILFTSNYVLASTNSSRI. . SP
Query Conservation  ....            

......       
     
        

 


    ..  
Alig confidence  ....













......















.














..

Template Conservation        

 






 


       
   
  

  

.
 











 
 
 
Template Sequence  PPQLSTLPTIVVVVDEFADMMMIVGKKVEELIARIAQKAR. AAGIHLILATQRPSVDVIT
Template Known Secondary structure 

B




TT

G.GGTS


TTTS
Template Predicted Secondary structure 








.










Template SS confidence 



























































   581........590.........600.........610.........620 .........630.........
 
   230.........240.........250.........260.........270
Predicted Secondary structure 














Query SS confidence 








































Query Sequence  PTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMAMATEMCK
Query Conservation    
    
  

    
 
           
          
Alig confidence  ......


































Template Conservation  ......
 

 
   

 


 
  

  


  


 
 
Template Sequence  . . . . . . GLIKANIPTRIAFQVSSKIDSRTILDQGGAEQLLG
Template Known Secondary structure  ......T




S
SSS
GGG

S
Template Predicted Secondary structure  ......











Template SS confidence 








































   640.........650.........660.........670....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D