Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence97.87%DateSun Sep 7 16:58:53 BST 2014
Rank142Aligned Residues198
% Identity9%Templated2fnaa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160.....
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Query Sequence  CLLVHGSPGTGKSVATNLIARAIAERENTSTYSLPPDPSHFD. . . . . . . . . . . . . . . . . .
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Template Sequence  ITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYISYKDFLLELQKEINKLVKR
Template Known Secondary structure  STTSST

GGGGTT
S


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   31........40.........50.........60.........70.........80.........90
 
   166...170.........180.........190....... ..200.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . GYKQQGVVIMDDLNQNPDGADMKLFCQMVSTV. . . EFIP
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Template Sequence  LPSLLKALKNIQGIVIXGNEIKFNRLSFANLLESFEQASKDNVIIVLDEAQELVKLRGVN
Template Known Secondary structure 
TTTTTSTT
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T
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TGGGGGG
TT

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   91........100.........110.........120.........130.........140.........150
 
   202.......210.........220.... .....230.........240.........250........
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Query Sequence  PMASLEEKGILFTSNYVLASTNS. . . SRISPPTVAHSDALARRFAFDMDIQVMNEYSRDG
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Template Sequence  LLPALAYAYDNLKRIKFIXSGSEXGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIE
Template Known Secondary structure 

TTSSTTTT
TTSTTTT






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   156...160.........170.........180.........190.........200.........210.....
 
   259260.........270.........280. ........290.........300.........310......
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Query Sequence  KLNMAMATEMCKNCHQPANFKRC. . CPLVCGKAIQLMDKSSRVRYSIDQITTMIINERNR
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Template Sequence  FLRRGFQEADIDFKDYEVVYEKIGGIPGWLTYFGFIYLDNKNLDFAINQTLEYAKKLILK
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   216...220.........230.........240.........250.........260.........270.....
 
   317..320.
Predicted Secondary structure 
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Query Sequence  RSNIG
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Template Conservation 
    
Template Sequence  EFENF
Template Known Secondary structure 
Template Predicted Secondary structure 
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   276...280
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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