Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence95.75%DateSun Sep 7 16:58:53 BST 2014
Rank404Aligned Residues92
% Identity17%Templatec4kssC_
PDB info PDB header:protein transportChain: C: PDB Molecule:type ii secretion system protein e, hemolysin-coregulated PDBTitle: crystal structure of vibrio cholerae atpase gspse hexamer
Resolution7.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160......... 170.......
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Query Sequence  CLLVHGSPGTGKSVATNLIARAIAERENTSTYSLPPDPSHFDGYKQ. . . . . . QGVVIMDD
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Template Sequence  IILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARG
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   259260.........270.........280.........290.........300.........310........
 
   178.180.........190.... .....200.........210.........220.
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Query Sequence  LNQNPDGADMKLFCQMV. STVEFIPPMASLEEKGILFTSNYVLAS
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Template Sequence  LRAILRQDPDVVMVGEIRDLETAQIAVQAS. . . . . . LTGHLVMST
Template Known Secondary structure  GGG

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   319320.........330.........340........ .350.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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