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Job DescriptionGood_intensive
Confidence99.66%DateSun Sep 7 16:58:53 BST 2014
Rank32Aligned Residues197
% Identity9%Templatec1qvrB_
PDB info PDB header:chaperoneChain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140.........150........
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Query Sequence  KRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLP
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Template Sequence  EAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRID.
Template Known Secondary structure  GGGTS
SSS
SBSSSSSSSSGGG
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   565....570.........580.........590.........600.........610.........620...
 
   159160.........170... ......180.........190...... ...200..... .
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Query Sequence  PDPSHFDGYKQQGVV. IMDDLNQNPDGADMKLFCQMVST. . . . . . VEFIPPMAS. . . . . L
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Template Sequence  . . . . . MTEYMEKHAVSRLQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDS
Template Known Secondary structure  .....TTT

SSGGGGG


SSSSGGGS
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S
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   624.....630.........640.........650.........660.........670........
 
   207..210.........220.... .....230.........240
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Query Sequence  EEKGILFTSNYVLASTNS. . . . . . . . . . . . . . . . . . . . . . . . . . SRISPPTVAHSDALAR
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Template Sequence  HGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRP. . . . . . EFLN
Template Known Secondary structure  SS


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   693......700.........710.........720.........730.........740.. ....
 
   241........250.........260.........270.........280.........290.........300
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Query Sequence  RFAFDMDIQVMNEYSRDGKLNMAMATEMCKNCHQPANFKRCCPLVCGKAIQLMDKSSRVR
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Template Sequence  RLDEIVVFRPLTKEQIRQIVEIQLS. . . . . . . . . . . . . . . . . . . . . . YLRARLAEKRISL
Template Known Secondary structure  T
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B




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   747..750.........760.........770. ........780....
 
   301........310... ......320.........
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Query Sequence  YSIDQITTMIINE. RNRRSNIGNCMEALFQ
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Template Sequence  ELTEAAKDFLAERGYDPVFGARPLRRVIQR
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   785....790.........800.........810....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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