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Job DescriptionGood_intensive
Confidence99.79%DateSun Sep 7 16:58:53 BST 2014
Rank23Aligned Residues201
% Identity17%Templatec3d8bB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:fidgetin-like protein 1; PDBTitle: crystal structure of human fidgetin-like protein 1 in complex with adp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120.........130.........140.........150....
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Query Sequence  AVEAKRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTST
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Template Sequence  EFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSIS
Template Known Secondary structure  T
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   407..410.........420.........430.........440.........450.........460......
 
   155....160.........170.........180.........190....... ..200.........210..
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Query Sequence  YSLPPDPSHFDGYKQQGVVIMDDLNQNPDGADMKLFCQMVSTV. . EFIPPMASLEEKGIL
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Template Sequence  . . . . . . . . . ASSLTEGEKMVRALFAVARCQQPAVIFIDEIDSLLSSRRIKTEFLVQLDGA
Template Known Secondary structure  .........GGGG

T
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   467..470.........480.........490.........500.........510.......
 
   213......220.........230.........240.........250.........260.........270..
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Query Sequence  FTSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMAMATEMCKNC
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Template Sequence  EDRILVVGATNRPQEIDE. . . . . . AARRRLVKRLYIPLPEASARKQIVINLMSKEQCCLS
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   536...540.........550... ......560.........570.........580.........
 
   273. .....280.........290...... ...300.........310
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Query Sequence  HQ. . . . . . . . . PANFKRCCPLVCGKAIQLMDKS. . . . . . . . . . SRVRYSIDQITTMI
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Template Sequence  EEEIEQIVQQSDAFSGADMTQLCREASLGPIRSLQTAATITPDQVRPIAYIDFENAF
Template Known Secondary structure  TTT









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   590.........600.........610.........620.........630.........640......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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