Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence98.72%DateSun Sep 7 16:58:53 BST 2014
Rank102Aligned Residues121
% Identity16%Templatec2w58B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:primosome component (helicase loader); PDBTitle: crystal structure of the dnai
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120.........130.........140.........150.........160.
Predicted Secondary structure 



















Query SS confidence 



























































Query Sequence  QKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLPPDP
Query Conservation                   
  
  


 



 


 

  

  
               
Alig confidence 




















.





































Template Conservation                       . 
 
 
  




 

 


  
               
Template Sequence  IKAIRFAERFVAEYEPGKKMK. GLYLHGSFGVGKTYLLAAIANELAKRNVSSLIVYVPEL
Template Known Secondary structure  T

TT



.
SSSSSSS


Template Predicted Secondary structure 







.








Template SS confidence 



























































   1142.......1150.........1160.. .......1170.........1180.........1190.........1200
 
   162.......170.........180.........190.........200.........210... .....
Predicted Secondary structure 



















...

Query SS confidence 



















































. . .




Query Sequence  SHFDGYKQQGVVIMDDLNQNPDGADMKLFCQMVSTVEFIPPMASLEEKGILF. . . TSNYV
Query Conservation       
 
  
   
                 

       
     
    ...    
Alig confidence 























..

























...




Template Conservation                          ..





 
           
  

  
       
Template Sequence  FRELKHSLQDQTMNEKLDYIKKVP. . VLMLDDLGAEASSWVRDDVFGPILQYRMFENLPT
Template Known Secondary structure  TTT
SSST
S..S
SS

TTT

Template Predicted Secondary structure 







..










Template SS confidence 



























































   1201........1210.........1220.... .....1230.........1240.........1250........
 
   219220.....
Predicted Secondary structure 


Query SS confidence 






Query Sequence  LASTNSS
Query Conservation 
 


  
Alig confidence 






Template Conservation 




  
Template Sequence  FFTSNFD
Template Known Secondary structure  SS
Template Predicted Secondary structure 



Template SS confidence 






   1260......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D