Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence98.88%DateSun Sep 7 16:58:53 BST 2014
Rank93Aligned Residues150
% Identity12%Templatec1jr3E_
PDB info PDB header:transferaseChain: E: PDB Molecule:dna polymerase iii, delta' subunit; PDBTitle: crystal structure of the processivity clamp loader gamma2 complex of e. coli dna polymerase iii
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130.........140.........150.........160....
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Query Sequence  EHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLPPDPSHF
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Template Sequence  LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ
Template Known Secondary structure  TTTTTS


S

TTSST
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S
S
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   7..10.........20.........30.........40.........50.........60......
 
   165.... 170.........180.. .......190.........200...
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Query Sequence  DGYKQ. . . . . . . . . . . . . . . . . . . . QGVVIMDDLNQNP. DGADMKLFCQMVSTVEFIPPM
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Template Sequence  LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAAN
Template Known Secondary structure  TS

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TTSSSB
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S
GGGB
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   67..70.........80.........90.........100.........110.........120......
 
   204.....210.........220.........230.........240.........250.........260.
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Query Sequence  ASLEEKGILFTSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLN
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Template Sequence  ALLKTLEEPPAETWFFLATREPERLLATLRS. . . . . . RC. RLHYLAPPPEQYAVTWLS
Template Known Secondary structure  S

TTS
STTS
TTTTT......TS.




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   127..130.........140.........150....... .. 160.........170.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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