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Job DescriptionGood_intensive
Confidence97.39%DateSun Sep 7 16:58:53 BST 2014
Rank234Aligned Residues131
% Identity8%Templatec2iy3A_
PDB info PDB header:rna-bindingChain: A: PDB Molecule:signal recognition particle protein ffh; PDBTitle: structure of the e. coli signal recognition particle2 bound to a translating ribosome
Resolution16.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70........
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Query Sequence  EWVSNKISKFIDWLKEKIIPQARDKLEFVTKLRQLEMLENQISTIHQSCPSQEHQEILFN
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Template Sequence  QQLSARLQEAIGRLRGRGRITEEDLKATLREI. . . . . . . . RRALMDADVNLEVARDFVER
Template Known Secondary structure  TTTS
S

........TTT

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   3......10.........20.........30.... .....40.........50....
 
   7980.........90.........100.........110.........120.........130........
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Query Sequence  NVRWLSIQSKRFAPLYAVEAKRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVA
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Template Sequence  VREEALGKQVLESLTPAEVILATVYEALKEALGGEARLPVLKDRNLWFLVGLQGSGKTTT
Template Known Secondary structure  TTTTT
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   55....60.........70.........80.........90.........100.........110....
 
   139140.........150.......
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Query Sequence  TNLIARAIAERENTSTYSL
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Template Sequence  AAKLALYYKGKGRRPLLVA
Template Known Secondary structure  TT

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   115....120.........130...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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