Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence98.71%DateSun Sep 7 16:58:53 BST 2014
Rank104Aligned Residues141
% Identity8%Templated1e94e_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140.........150.........160.........170... ......
Predicted Secondary structure 
















.
Query SS confidence 




















































.





Query Sequence  EPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLPPDPSHFDGYKQQGVV. IMDDLN
Query Conservation   
  


 



 


 

  

  
                    
 
  
 .  
   
Alig confidence 




















































.





Template Conservation   
 



 







 





  
  

   
 
   
 



      

 
   
 
Template Sequence  TPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAV
Template Known Secondary structure 





TTSSTTTT

GGGGGGGGTS


TT
Template Predicted Secondary structure 























Template SS confidence 



























































   4950.........60.........70.........80.........90.........100........
 
   180.........190.........200.........210...... ...220.........230...
Predicted Secondary structure 


















......







Query SS confidence 




































. . . . . .
















Query Sequence  QNPDGADMKLFCQMVSTVEFIPPMASLEEKGILFTSN. . . . . . YVLASTNSSRISPPTVA
Query Conservation                

       
     
       ...... 

 


        
 
Alig confidence 




































......
















Template Conservation             

             
        
                  
    
Template Sequence  KMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQL
Template Known Secondary structure  TTTTTTSSSTTTS


SS

S
SGGGSS


TTSS


Template Predicted Secondary structure 
























Template SS confidence 



























































   109110.........120.........130.........140.........150.........160........
 
   234.....240.........250.........260.....
Predicted Secondary structure 








Query SS confidence 































Query Sequence  HSDALARRFAFDMDIQVMNEYSRDGKLNMAMA
Query Conservation     
  

    
 
           
     
Alig confidence 


....
























Template Conservation     ....                         
Template Sequence  DDK. . . . EIEKQKARKLKIKDAMKLLIEEEAA
Template Known Secondary structure 


....






S


TT
Template Predicted Secondary structure 


....








Template SS confidence 































   169170. ........180.........190......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D