Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence97.95%DateSun Sep 7 16:58:53 BST 2014
Rank126Aligned Residues127
% Identity15%Templatec3vkgB_
PDB info PDB header:motor proteinChain: B: PDB Molecule:dynein heavy chain, cytoplasmic; PDBTitle: x-ray structure of an mtbd truncation mutant of dynein motor domain
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140 .........150.........160.........170.......
Predicted Secondary structure 





.








......
Query SS confidence 















.




































. . . . . .
Query Sequence  LLVHGSPGTGKSVATN. LIARAIAERENTSTYSLPPDPSHFDGYKQQGVVIMDD. . . . . .
Query Conservation 


 



 


 

 . 

  
                    
 
  
   
 ......
Alig confidence 















.




































......
Template Conservation 


 
  




  
   
          

 
  

   

  

              
Template Sequence  LILCGPPGSGKTMTLTSTLRAFPDFEVVSLNFSSATTPELLLKTFDHHCEYKRTPSGETV
Template Known Secondary structure 

STTSSTTT
TT

TT

TTTTTTTT
Template Predicted Secondary structure 
























Template SS confidence 



























































   2670.........2680.........2690.........2700.........2710.........2720.........
 
   178.180.........190.........200.........210..
Predicted Secondary structure 















.........................
Query SS confidence 


































. . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  LNQNPDGADMKLFCQMVSTVEFIPPMASLEEKGIL. . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation                  

       
     
   .........................
Alig confidence 

















.......









.........................
Template Conservation    
   

  







.......

  
  
 
  








  
 

        
Template Sequence  LRPTQLGKWLVVFCDEIN. . . . . . . LPSTDKYGTQRVITFIRQMVEKGGFWRTSDHTWIK
Template Known Secondary structure  SSTTSTTT.......
S


TTS

STTTT
Template Predicted Secondary structure 











.......



















Template SS confidence 



























































   2730.........2740....... ..2750.........2760.........2770.........2780..
 
   213......220...... ...230.........240.........250.........260.....
Predicted Secondary structure 






.....












Query SS confidence 













. . . . .






































Query Sequence  FTSNYVLASTNSSR. . . . . ISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMAMA
Query Conservation       

 


   .....     
    
  

    
 
           
     
Alig confidence 













.....



......






.




















Template Conservation 
     
 
 

    

  

 ......


  
 . 
 
   
  

  
    
 
Template Sequence  LDKIQFVGACNPPTDAGRVQLTH. . . . . . RFLRHAP. ILLVDFPSTSSLTQIYGTFNR
Template Known Secondary structure 
S

TTSTT




......TS

.




Template Predicted Secondary structure 














.......



Template SS confidence 

























































   2783......2790.........2800..... ....2810.. .......2820.........2830...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D