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Job DescriptionGood_intensive
Confidence99.93%DateSun Sep 7 16:58:53 BST 2014
Rank2Aligned Residues161
% Identity20%Templatec3cf2B_
PDB info PDB header:transport proteinChain: B: PDB Molecule:transitional endoplasmic reticulum atpase; PDBTitle: structure of p97/vcp in complex with adp/amp-pnp
Resolution3.50 Å
Model Dimensions (Å)X:53.833 Y:52.808 Z:41.666

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140.........150.........160.......
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Query Sequence  INNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLPPDPSHFDGY
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Template Sequence  VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANE. . . . . CQANFISIKGPELLTMW
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   497..500.........510.........520.........530.... .....540.........550.
 
   168.170... ......180.........190...... ...200.........210.........220
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Query Sequence  KQQGVV. IMDDLNQNPDGADMKLFCQMVST. . . . . . VEFIPPMASLEEKGILFTSNYVLA
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Template Sequence  FGESEANVREIFDKARQAAPCVLFFDELDSIADRVINQILTEMDGMSTKKN. . . . . VFII
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   552.......560.........570.........580.........590.........600.. ....
 
   221........230.........240.........250.........260.........270.........280
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Query Sequence  STNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMAMATEMCKNCHQPANFKR
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Template Sequence  GANRPDIIDPAILRPG. . . . RLDQLIYI. . . . . KSRVAILKANLRKSA. . . . . . . . . . KD
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   621........630...... ...640.... .....650......... 660.
 
   281........290.......
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Query Sequence  CCPLVCGKAIQLMDKSS
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Template Sequence  DLTEICQRACKLAIRES
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   686...690.........700..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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