Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence99.59%DateSun Sep 7 16:58:53 BST 2014
Rank36Aligned Residues167
% Identity10%Templatec1r6bX_
PDB info PDB header:hydrolaseChain: X: PDB Molecule:clpa protein; PDBTitle: high resolution crystal structure of clpa
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140.........150........
Predicted Secondary structure 


















Query SS confidence 



























































Query Sequence  KRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLP
Query Conservation    
                 
  
  


 



 


 

  

  
            
Alig confidence 



























































Template Conservation    
  
                     

 



 


 

  

  
   
  
  

 
Template Sequence  KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEY
Template Known Secondary structure  TT
S
TTS
S
STTSST
GGG
Template Predicted Secondary structure 















Template SS confidence 



























































   465....470.........480.........490.........500.........510.........520....
 
   159160.........170..... ....180.........190.........200....
Predicted Secondary structure 



......







........
Query SS confidence 
















. . . . . .




























. . . . . . . .
Query Sequence  PDPSHFDGYKQQGVVIM. . . . . . DDLNQNPDGADMKLFCQMVSTVEFIPPMA. . . . . . . .
Query Conservation          
 
  
   ......
                 

       
 ........
Alig confidence 
















......




























........
Template Conservation          
 
      
      
          

  



     
   
   

 
Template Sequence  MERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG
Template Known Secondary structure  SSSS

SSS



S
STT
SSTGGGS
S
Template Predicted Secondary structure 






















Template SS confidence 



























































   525....530.........540.........550.........560.........570.........580....
 
   205....210.........220.........230... ......240.........250.........
Predicted Secondary structure  ...


















..








Query SS confidence  . . .




























. .

























Query Sequence  . . . SLEEKGILFTSNYVLASTNSSRISPPTVA. . HSDALARRFAFDMDIQVMNEYSRDGK
Query Conservation  ...    
        

 


        
 ..   
  

    
 
           
Alig confidence  ...




























..

























Template Conservation                 


 


                
  
    
 
  
       
Template Sequence  TLTDNNGRKADFRNVVLVMTTNAGVRAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQV
Template Known Secondary structure  TTT
TT
SS


S
TT
S




Template Predicted Secondary structure 






















Template SS confidence 



























































   585....590.........600.........610.........620.........630.........640....
 
   260.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  LNMAMA
Query Conservation 
     
Alig confidence 





Template Conservation      
 
Template Sequence  VDKFIV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   662.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D