Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence96.88%DateSun Sep 7 16:58:53 BST 2014
Rank309Aligned Residues144
% Identity17%Templatec3f9vA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:minichromosome maintenance protein mcm; PDBTitle: crystal structure of a near full-length archaeal mcm: functional2 insights for an aaa+ hexameric helicase
Resolution4.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   123......130.........140.........150 .........160.........170...
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Query Sequence  VCLLVHGSPGTGKSVATNLIARAIAERE. . . . . . . . . NTSTYSLPPDPSHFDGYKQQGVV
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Template Sequence  IHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGAL
Template Known Secondary structure 

SS

TSSSTT
S



TT
STTTTS
SSGGGTSS
S
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   334.....340.........350.........360.........370.........380.........390...
 
   174.....180.........190...... ...200.........210.........220
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Query Sequence  IMDDLNQNPDGADMKLFCQMVST. . . . . . . . . . . . . VEFIPPMASLEEKGILFTSNYVLA
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Template Sequence  VLADGG. . . . . . . . IAVIDEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIA
Template Known Secondary structure  SSS........

TTTT


SSSSSSSS



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   394..... 400.........410.........420.........430.........440.....
 
   221.... ....230.........240.........250.........260.........270...
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Query Sequence  STNSS. . . . . . . RISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMAMATEMCKNCH
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Template Sequence  AGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPGEQDRELANYILDVHSGKSTK
Template Known Secondary structure 

TT

S
TTS
S
TTT
S
SSSGGG
S



TTTTT


SSS
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   446...450.........460.........470.........480.........490.........500.....
 
   274
Predicted Secondary structure 
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Query Sequence  Q
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  N
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 
   506
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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