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Job DescriptionGood_intensive
Confidence97.14%DateSun Sep 7 16:58:53 BST 2014
Rank274Aligned Residues227
% Identity7%Templatec3gehA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:trna modification gtpase mnme; PDBTitle: crystal structure of mnme from nostoc in complex with gdp, folinic2 acid and zn
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120.........130.........140.........150...
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Query Sequence  YAVEAKRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTS
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Template Sequence  IISDIENIAAEISQLLATKDKGELLRT. GLKVAIVGRPNVGKSSLLNAWSQSDRAIVTDL
Template Known Secondary structure  TTT.

TTSSBS

S

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   194.....200.........210.........220 .........230.........240.........250..
 
   154.....160.........170.........180.........190.........200.........210...
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Query Sequence  TYSLPPDPSHFDGYKQQGVVIMDDLNQNPDGADMKLFCQMVSTVEFIPPMASLEEKGILF
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Template Sequence  PGTTRDVVESQLVVGGIPVQVLDQAA. . . . . NTADLVLLTIDAATGWTTGDQEIYEQVKH
Template Known Secondary structure  TT

TT




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S
STTT
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TT
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   253......260.........270........ .280.........290.........300.......
 
   214.....220.........230.........240.........250.........260.........270...
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Query Sequence  TSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLNMAMATEMCKNCH
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Template Sequence  RPLILVM. . NKIDLVEKQLITSLEYPENITQIVHTAAAQKQGIDSLETAILEIVQTGKVQ
Template Known Secondary structure  S
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GGGSTT



TT


BTTTTBSTTSSSS
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   328.330.... .....340.........350.........360.........370.........380.....
 
   274. ....280.........290.........300........ .310.........320.
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Query Sequence  QP. . . . . . . . . . ANFKRCCPLVCGKAIQLMDKSSRVRYSIDQITT. . MIINERNRRSNIG
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Template Sequence  AADMDLAINQRQAAALTQAKMSLEQVQATITQQLPLDFWTIDLRGAIQALGEITGEEVTE
Template Known Secondary structure  S

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TTTT

GGGTTSS

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   386...390.........400.........410.........420.........430.........440.....
 
   322......
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Query Sequence  NCMEALF
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Template Sequence  SVLDRIF
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   446...450..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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