Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence98.87%DateSun Sep 7 16:58:53 BST 2014
Rank94Aligned Residues191
% Identity12%Templated1g8pa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130.........140...... ...150.
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Query Sequence  IEPVCLLVHGSPGTGKSVATNLIARAI. . . . . . . . . . . . . . . . . . . . . . . . . . . . AEREN
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Template Sequence  PGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRK
Template Known Secondary structure  GGG



GGG
TTS

TT
TT

SSGGGS
TT


S


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   43......50.........60.........70.........80.........90.........100..
 
   152.......160.........170.........180....... ..190..... ..
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Query Sequence  TSTYSLPPDPSHFDGYKQQGVVIMDDLNQNPDGADM. . . . . . . . KLFCQMVS. . . . . . TV
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Template Sequence  PTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVD
Template Known Secondary structure 



TT




GGG

TTTTGGGS
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   103......110.........120.........130.........140.........150.........160..
 
   198.200..... ....210.........220.........230.........240.........250
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Query Sequence  EFIPPMAS. . . . . . . LEEKGILFTSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQV
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Template Sequence  LLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLR. . . . . PQLLDRFGLSVEVLS
Template Known Secondary structure  S

TT




S
S



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   163......170.........180.........190.........200.. .......210.......
 
   251........260.........270.........280.........290.........300.........310
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Query Sequence  MNEYSRDGKLNMAMATEMCKNCHQPANFKRCCPLVCGKAIQLMDKSSRVRYSIDQITTMI
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Template Conservation 
        
                               
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Template Sequence  PRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAP. NTALYDC
Template Known Secondary structure 

S
GGG
B

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   218.220.........230.........240.........250.........260......... 270......
 
   311.....
Predicted Secondary structure 
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Query Sequence  INERNR
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Template Conservation        
Template Sequence  AALCIA
Template Known Secondary structure 
Template Predicted Secondary structure 
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   277..280..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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