Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence99.31%DateSun Sep 7 16:58:53 BST 2014
Rank59Aligned Residues161
% Identity11%Templated1g41a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120. ........130.........140.........150.....
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Query Sequence  AKRIQKLEHTINNYIQFKSKHRIE. . PVCLLVHGSPGTGKSVATNLIARAIAERENTSTY
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Template Sequence  KRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEA
Template Known Secondary structure  S
TTTTTT






TTSSTT

G
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   24.....30.........40.........50.........60.........70.........80...
 
   156... 160.........170.........180......
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Query Sequence  SLPP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . DPSHFDGYKQQGVVIMDDLNQNPDGAD
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Template Sequence  TKFTVGKEVDSIIRDLTDSAMKLVRQQEIAKNRLIDDEAAKLINPEELKQKAI. DAVEQN
Template Known Secondary structure  GGG




TS



GGGS
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   84.....90.........100.........110.........120.........130...... ...140..
 
   187..190...... ...200.........210.........220....
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Query Sequence  MKLFCQMVST. . . . . . . . . . . . . . . . . . . . . . VEFIPPMASLEEKGILFTSNYVLASTNS
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Template Sequence  GIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAF
Template Known Secondary structure 
TGGGGS

SS
SSS

TT
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   252.......260.........270.........280.........290.........300.........310.
 
   225....230.........240.........250.........260.
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Query Sequence  SRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLN
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Template Sequence  QVARPSDLIP. . ELQGRLPIRVELTALSAADFERILT
Template Known Secondary structure  SS

GGGS
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   312.......320. ........330.........340......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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