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Job DescriptionGood_intensive
Confidence99.19%DateSun Sep 7 16:58:53 BST 2014
Rank80Aligned Residues218
% Identity14%Templatec2c9oC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:ruvb-like 1; PDBTitle: 3d structure of the human ruvb-like helicase ruvbl1
Resolution2.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120.........130.........140.........150.........160.
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Query Sequence  QKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLPPDP
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Template Sequence  ENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELG. . . SKVPFCPMVGS
Template Known Secondary structure  TT

TT


TTSS
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GG
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   43......50.........60.........70.........80........ .90.........
 
   162.......170.........180......
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Query Sequence  SHFDGYKQQGVVIMDDLNQNPDGAD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EVYSTEIKKTEVLMENFRRAIGLRIKETKKKEIIQDVTLHDLDVAGEINKVVNKYIDQGI
Template Known Secondary structure  GG

SSS
T

TT


TTS
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   100.........110.........120.........130.........140.........150.........
 
   187..190.........200.........210.........220.........230.... .
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Query Sequence  . . . . . MKLFCQMVSTVEFIPPMASLEEKGILFTSNYVLASTNSSRISPPTVAH. . . . . . S
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Template Sequence  AELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIP
Template Known Secondary structure 

GGG
BTSSS



S
BTTSS
TT

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   292.......300.........310.........320.........330.........340.........350.
 
   236...240.........250.........260.........270.... .....280......
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Query Sequence  DALARRFAFDMDIQVMNEYSRDGKLNMAMATEMCKNCHQ. . . . . . . . . PANFKRCCPLVC
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Template Sequence  LDLLDRV. MIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLL
Template Known Secondary structure  TT.




TT

B
S
T
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   352...... .360.........370.........380.........390.........400.........410
 
   287..290.........300.........310.........320...
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Query Sequence  GKAIQLMDKSSRVRYSIDQITTMIINERNRRSNIGNC
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Template Sequence  TPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKIL
Template Known Secondary structure  TT
SSB



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   411........420.........430.........440.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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