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Job DescriptionGood_intensive
Confidence99.87%DateSun Sep 7 16:58:53 BST 2014
Rank10Aligned Residues204
% Identity16%Templatec2dhrC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:ftsh; PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l)
Resolution3.90 Å
Model Dimensions (Å)X:62.942 Y:44.722 Z:40.888

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.........150.......
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Query Sequence  AKRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSL
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Template Sequence  KEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGE. . . . . ARVPFIT
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   165....170.........180.........190.........200.........210.. .......
 
   158.160.........170... ......180.........190...... ...200
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Query Sequence  PPDPSHFDGYKQQGVV. IMDDLNQNPDGADMKLFCQMVST. . . . . . . . . . . . . . . . VEFI
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Template Sequence  ASGSDFVEMFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTL
Template Known Secondary structure  GGGGTSS
TTTTSTTSSS

GGGT


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   220.........230.........240.........250.........260.........270.........
 
   201........210.........220.........230.........240.........250.........260
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Query Sequence  PPMASLEEKGILFTSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKL
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Template Sequence  NQLLVEMDGFEKDTAIVVMAATNRPDILDPALLRPG. . . . RFDRQIAIDAPDVKGREQIL
Template Known Secondary structure  GGG

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   280.........290.........300.........310..... ....320.........330.....
 
   261........270.........280 .........290.........300.........310
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Query Sequence  NMAMATEMCKNCHQPANFKR. . . . . . . . CCPLVCGKAIQLMDKSSRVRYSIDQITTMI
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Template Sequence  RIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAA
Template Known Secondary structure  TTSSS



SSTTTTS
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   336...340.........350.........360.........370.........380.........390...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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