Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence98.55%DateSun Sep 7 16:58:53 BST 2014
Rank108Aligned Residues179
% Identity11%Templatec2qbyB_
PDB info PDB header:replication/dnaChain: B: PDB Molecule:cell division control protein 6 homolog 3; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
Resolution3.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140.........150. .
Predicted Secondary structure 
















......
Query SS confidence 




















































. . . . . .
Query Sequence  KRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAEREN. . . . . . T
Query Conservation    
                 
  
  


 



 


 

  

  
     ...... 
Alig confidence 

















.....





























......
Template Conservation   

  
   
        .....   


 
  




 

      
            
Template Sequence  DILRDAAIAIRYFVKNEV. . . . . KFSNLFLGLTGTGKTFVSKYIFNEIEEVKKEDEEYKD
Template Known Secondary structure  TT

.....


TTSSSSSSTT
Template Predicted Secondary structure 


.....
















Template SS confidence 



























































   37..40.........50.... .....60.........70.........80.........90.
 
   153......160......... 170.........180.........190...
Predicted Secondary structure 



...................






Query SS confidence 
















. . . . . . . . . . . . . . . . . . .























Query Sequence  STYSLPPDPSHFDGYKQ. . . . . . . . . . . . . . . . . . . QGVVIMDDLNQNPDGADMKLFCQM
Query Conservation                
 
...................  
   
                 
Alig confidence 
















...................























Template Conservation                                                           

 
Template Sequence  VKQAYVNCREVGGTPQAVLSSLAGKLTGFSVPKHGINLGEYIDKIKNGTRNIRAIIYLDE
Template Known Secondary structure 

S

S


SSSS
TSSS
T
Template Predicted Secondary structure 























Template SS confidence 



























































   92.......100.........110.........120.........130.........140.........150.
 
   194.. ...200.........210.........220.........230.........240.........250..
Predicted Secondary structure 

.



























Query SS confidence 


.























































Query Sequence  VST. VEFIPPMASLEEKGILFTSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMN
Query Conservation 

 .      
     
        

 


        
    
  

    
 
    
Alig confidence 


.



































...
















Template Conservation               
  
         
  
        
 ...  
  
           
Template Sequence  VDTLVKRRGGDIVLYQLLRSDANISVIMISNDINVRDYME. . . PRVLSSLGPSVIFKPYD
Template Known Secondary structure  TSTTSTSSS

SSTTTTTTS
...T






Template Predicted Secondary structure 











...









Template SS confidence 



























































   152.......160.........170.........180.........190. ........200........
 
   253......260.........270.........280.....
Predicted Secondary structure 








Query SS confidence 
































Query Sequence  EYSRDGKLNMAMATEMCKNCHQPANFKRCCPLV
Query Conservation         
                         
Alig confidence 
































Template Conservation    
    
                    
    
Template Sequence  AEQLKFILSKYAEYGLIKGTYDDEILSYIAAIS
Template Known Secondary structure  TS
TTS

S
Template Predicted Secondary structure 







Template SS confidence 
































   209210.........220.........230.........240.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D