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Job DescriptionGood_intensive
Confidence99.14%DateSun Sep 7 16:58:53 BST 2014
Rank83Aligned Residues158
% Identity5%Templatec3te6A_
PDB info PDB header:gene regulationChain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120.........130.........140.........150.. .
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Query Sequence  KRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENT. . . . . S
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Template Sequence  EDFTRIFLPIYDSLXSSQ. . . . . NKLFYITNADDSTKFQLVNDVXDELITSSARKELPIF
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   554.....560.........570. ........580.........590.........600........
 
   154.....160 .........170 .........180 .........190........
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Query Sequence  TYSLPPD. . . . . . . . PSHFDGYKQQ. . . . GVVIMDDLNQ. . . NPDGADMKLFCQMVSTVE
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Template Sequence  DYIHIDALELXDALYEKIWFAISKENGDISLEALNFYITNVPKAKKRKTLILIQNPENLL
Template Known Secondary structure  TT


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   609610.........620.........630.........640.........650.........660........
 
   199200........ .210.........220.........230.........240.........250.......
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Query Sequence  FIPPMASLEE. KGILFTSNYVLASTNSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRD
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Template Sequence  SEKILQYFEKWISSKNSKLSIICVGGHNVTIREQINIXP. . . . SLKAHFTEIKLNKVDKN
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   673......680.........690.........700.........710. ........720........
 
   258.260.....
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Query Sequence  GKLNMAMA
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Template Sequence  ELQQXIIT
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   729730......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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