Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence97.48%DateSun Sep 7 16:58:53 BST 2014
Rank212Aligned Residues130
% Identity14%Templatec4kxfF_
PDB info PDB header:immune systemChain: F: PDB Molecule:nlr family card domain-containing protein 4; PDBTitle: crystal structure of nlrc4 reveals its autoinhibition mechanism
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PVCLLVHGSPGTGKSVATNLIARA. . . . . . . IAERENTSTYSLPPD. . . . . . . . . . PSHF
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Template Sequence  KSPCLIEGESGKGKSTLLQRIAMLWASGGCRALKGFRLVFFIHLRSARGGLFETLYDQLL
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SSSTTSSTT

SGGGG
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S

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   162.......170.........180.........190.........200.........210.........220.
 
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Query Sequence  DGYKQQGVVIMDDLNQNPDGADMKLFCQMVS. . TVEFIPPMASLEEKGILFTSNYVLAST
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Template Sequence  NIPDFISKPTFKALLLKLHKE. VLFLLDGYNEFHPQNCPEIEALIKENHRFKNMVIVTTT
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TT

GGG.
GGG

TTT


TTT

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   222.......230.........240.. .......250.........260.........270.........280
 
   223......230.........240.........250.........260.
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Query Sequence  NSSRISPPTVAHSDALARRFAFDMDIQVMNEYSRDGKLN
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Template Sequence  T. . ECLR. . . . . . . HIRHVGALTAEVGDMTEDSAKDLIE
Template Known Secondary structure  G..GG.......TT
S



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   281 .... ....290.........300.........310
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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