Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence99.20%DateSun Sep 7 16:58:53 BST 2014
Rank77Aligned Residues197
% Identity12%Templated1um8a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140.........150.........160.......
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Query Sequence  INNYIQFKSKHRIEPVCLLVHGSPGTGKSVATNLIARAIAERENTSTYSLPPDPSHFDGY
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Template Sequence  SNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTVENILTRL
Template Known Secondary structure  TT






TTSSTT

GGG


T
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   128.130.........140.........150.........160.........170.........180.......
 
   168.170.........180.........190...... ...200.........210.........220.
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Query Sequence  KQQGVVIMDDLNQNPDGADMKLFCQMVST. . . . . . VEFIPPMASLEEKGILFTSNYVLAS
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Template Sequence  LQASD. . . . . . WNVQKAQKGIVFIDEIDKIGEGVQQALLKIVEGSLVNQIDTSDILFICA
Template Known Secondary structure  TT......T
TTSTGGG






TT
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   196...200 .........210.........220.........230.........240.........
 
   222.......230... ......240......
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Query Sequence  TNSSRISPPTVA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HSDALARRFAFDM
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Template Sequence  GAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTYGLIPELIGRLPVLS
Template Known Secondary structure 

TTTTTS
SS


S


SS

TTTTTTSGGG

TT

TT

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   279280.........290.........300.........310.........320.........330........
 
   247..250.........260.........270.........280.........290.........300......
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Query Sequence  DIQVMNEYSRDGKLNMAMATEMCKNCHQPANFKRCCPLVCGKAIQLMDKSSRVRYSIDQI
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Template Sequence  TLDSISLEAMVDILQKPKNA. . . . . . . . . . . . . . . . . . LIKQYQQLFKMDEVDLIFEEEA
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SSTT
..................TTT

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   339340.........350........ .360.........370.........380
 
   307..310........ .320........
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Query Sequence  TTMIINERNRRS. . . . NIGNCMEALF
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Template Sequence  IKEIAQLALERKTGARGLRAIIEDFC
Template Known Secondary structure  TT
TGGG
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   381........390.........400......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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