Return to main results Retrieve Phyre Job Id

Job DescriptionGood_intensive
Confidence97.18%DateSun Sep 7 16:58:53 BST 2014
Rank270Aligned Residues70
% Identity11%Templatec2wwwB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:methylmalonic aciduria type a protein, PDBTitle: crystal structure of methylmalonic acidemia type a protein
Resolution2.64 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   77..80.........90.........100.........110.........120.........130......
Predicted Secondary structure 













Query SS confidence 



























































Query Sequence  FNNVRWLSIQSKRFAPLYAVEAKRIQKLEHTINNYIQFKSKHRIEPVCLLVHGSPGTGKS
Query Conservation                          
                 
  
  


 



 


Alig confidence 



























































Template Conservation     
   
   
            

                      
 


 





Template Sequence  RACLAEAITLVESTHSRKKELAQVLLQKVLLYHREQEQSNKGKPLAFRVGLSGPPGAGKS
Template Known Secondary structure 

STTTT

SS

TTSS
Template Predicted Secondary structure 





















Template SS confidence 



























































   98.100.........110.........120.........130.........140.........150.......
 
   137..140......
Predicted Secondary structure 
Query SS confidence 









Query Sequence  VATNLIARAI
Query Conservation   

  

  
Alig confidence 









Template Conservation 



 
    
Template Sequence  TFIEYFGKML
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 









   158.160.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D