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Job DescriptionGood_intensive
Confidence95.35%DateSun Sep 7 16:58:53 BST 2014
Rank427Aligned Residues131
% Identity16%Templatec2iusB_
PDB info PDB header:membrane proteinChain: B: PDB Molecule:dna translocase ftsk; PDBTitle: e. coli ftsk motor domain
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150. ........160.........
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Query Sequence  CLLVHGSPGTGKSVATNLIARAIAEREN. . . TSTYSLPPDPSHFDGYKQ. . . . . . . . . . .
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Template Sequence  HLLVAGTTGSGASVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTD
Template Known Secondary structure  S

TTSSTT

TTT
TTSSSSGGGTT
TTBSSS
B
S
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   986...990.........1000.........1010.........1020.........1030.........1040.....
 
   170.........180. ....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . QGVVIMDDLNQN. . . . . . . . . . . . . . . . . . . . PDGA
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Template Sequence  MKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWHPVLKKEP
Template Known Secondary structure  TT
SSTT


B
TT


B




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   1046...1050.........1060.........1070.........1080.........1090.........1100.....
 
   186...190..... ....200.........210.........220....... ..230.......
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Query Sequence  DMKLFCQMVS. . . . . . TVEFIPPMASLEEKGILFTSNYVLASTNSSRI. . SPPTVAHSDA
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Template Sequence  YIVVLVDEFADLMMTVGKKVEELIARLAQKAR. AAGIHLVLATQRPSVDVIT. . . . . . GL
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   1115....1120.........1130.........1140...... ...1150.........1160..... ..
 
   238.240.........250.........260.
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Query Sequence  LARRFAFDMDIQVMNEYSRDGKLN
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Template Sequence  IKANIPTRIAFTVSSKIDSRTILD
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   1168.1170.........1180.........1190.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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