Job Description KCJ11_HUMAN_ATP-sensitive_inward_rectifier_potassium_channel_11_ Confidence 100.00% Date Wed Jun 17 23:05:45 BST 2015 Rank 5 Aligned Residues 239 % Identity 50% Template c2xkyI_ PDB info PDB header:metal transport Chain: I: PDB Molecule:inward rectifier potassium channel 2; PDBTitle: single particle analysis of kir2.1nc_4 in negative stain Resolution 17.20 Å Model Dimensions (Å) X:50.114 Y:79.812 Z:54.577

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	R	F	V	S	K	K	G	N	C	N	V	A	H	K	N	I	R	E	Q	G	R	F	L	Q	D	V	F	T	T	L	V	D	L	K	W	P	H	T	L	L	I	F	T	M	S	F	L	C	S	W	L	L	F	A	M	A	W	W
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	S	R	F	V	K	K	D	G	H	C	N	V	Q	F	I	N	V	G	E	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S		S	S		T	T	S			S								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	A	F	A	H	G	D	L	A	P	S	E	G	T	A	E	P	C	V	T	S	I	H	S	F	S	S	A	F	L	F	S	I	E	V	Q	V	T	I	G	F	G	G	R	M	V	T	E	E	C	P	L	A	I	L	I	L	I	V
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	I	V	G	L	M	I	N	A	I	M	L	G	C	I	F	M	K	T	A	Q	A	H	R	R	A	E	T	L	I	F	S	K	H	A	V	I	A	L	R	H	G	R	L	C	F	M	L	R	V	G	D	L	R	K	S	M	I	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	G	G	R	N	E	T	L	V	F	S	H	N	A	V	I	A	M	R	D	G	K	L	C	L	M	W	R	V	G	N	L	R	K	S	H	L	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S			S					S							B	T	T	B											S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	T	I	H	M	Q	V	V	R	K	T	T	S	P	E	G	E	V	V	P	L	H	Q	V	D	I	P	M	E	N	G	V	G	G	N	S	I	F	L	V	A	P	L	I	I	Y	H	V	I	D	A	N	S	P	L	Y	D	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	H	V	R	A	Q	L	L	K	S	R	I	T	S	E	G	E	Y	I	P	L	D	Q	I	D	I	N	V	G	F	D	S	G	I	D	R	I	F	L	V	S	P	I	T	I	V	H	E	I	D	E	D	S	P	L	Y	D	L	S
Template Known Secondary structure													B			T	T				B	S	S							S	S	T	T	T	T	T	T	B				S	S										T	T	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	D	L	H	H	H	Q	D	L	E	I	I	V	I	L	E	G	V	V	E	T	T	G	I	T	T	Q	A	R	T	S	Y	L	A	D	E	I	L	W	G	Q	R	F	V	P	I	V	A	E	E	D	G	R	Y	S	V	D	Y	S
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		K	Q	D	I	.	D	N	A	D	F	E	I	V	V	I	L	E	G	M	V	E	A	T	A	M	T	T	Q	C	R	S	S	Y	L	A	N	E	I	L	W	G	H	R	Y	E	P	V	L	F	E	E	K	H	Y	Y	K	V	D	Y	S
Template Known Secondary structure						.																S	S		S											S	T	T				T											S	S	S					G	G
Template Predicted Secondary structure						.
Template SS confidence
		165	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		332	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.				370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure											.																														.	.	.
Query SS confidence											.																														.	.	.
Query Sequence		K	F	G	N	T	I	K	V	P	.	T	P	L	C	T	A	R	Q	L	D	E	D	H	S	L	L	E	A	L	T	L	A	S	A	R	G	P	L	R	.	.	.	K	R	S	V	P	M	A	K	A	K	P	K	F	S	I	S	P	D
Query Conservation											.																														.	.	.
Alig confidence											.																														.	.	.
Template Conservation
Template Sequence		R	F	H	K	T	Y	E	V	P	N	T	P	L	C	S	A	R	D	L	A	E	K	K	Y	I	L	S	N	A	N	S	F	C	Y	E	N	E	V	A	L	T	S	K	E	E	E	E	D	S	E	N	G	V	P	E	S	T	S	T	D
Template Known Secondary structure		G	T	T						T	T	S			S								T	T	T			S	S								S				T	T	T	T			S		S	S		S	S	S		S	S				S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		388	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	P
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		284	.	.

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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
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