Job Description KCJ11_HUMAN_ATP-sensitive_inward_rectifier_potassium_channel_11_ Confidence 24.06% Date Wed Jun 17 23:05:45 BST 2015 Rank 49 Aligned Residues 92 % Identity 20% Template c3j5pB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:transient receptor potential cation channel subfamily v PDBTitle: structure of trpv1 ion channel determined by single particle electron2 cryo-microscopy Resolution 3.27 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	I	F	T	M	S	F	L	C	S	W	L	L	F	A	M	A	W	W	L	I	A	F	A	H	G	D	L	A	P	S	E	G	T	A	E	P	C	V	T	S	I	H	S	F	S	S	A	F	L	F	S	I	E	V	Q	V	T	I
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		L	C	R	F	M	F	V	Y	L	V	F	L	F	G	F	S	T	A	V	V	T	L	I	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	Y	N	S	L	Y	S	T	C	L	E	L	F	.	.	K	F	T	I
Template Known Secondary structure																										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S	S										.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.																.	.	.	.	.	.	.	.	610	.	.	.	.	.			.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		G	F	G	G	R	M	V	T	E	E	C	.	.	.	.	P	L	A	I	L	I	L	I	V	Q	N	I	V	G	L	M	I	N	A	I	M	L	G	C	I	F	M	K	T	A	Q	A	H	R	R	A	E	T
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.
Template Conservation
Template Sequence		G	M	G	D	L	E	F	T	E	N	Y	D	F	K	A	V	F	I	I	L	L	L	A	Y	V	I	L	T	Y	I	L	L	L	N	M	L	I	A	L	M	G	E	T	V	N	K	I	A	Q	E	S	K	N
Template Known Secondary structure		T				S	S						S	S																T
Template Predicted Secondary structure
Template SS confidence
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
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