Job Description multi-dom Confidence 68.04% Date Sun Sep 7 16:46:09 BST 2014 Rank 175 Aligned Residues 113 % Identity 12% Template c4ovrA_ PDB info PDB header:solute-binding protein Chain: A: PDB Molecule:trap dicarboxylate transporter, dctp subunit; PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 xanthobacter autotrophicus py2, target efi-510329, with bound beta-d-3 galacturonate Resolution 1.65 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																											.	.												.	.
Query SS confidence																											.	.												.	.
Query Sequence		V	I	W	I	N	G	D	K	G	Y	N	G	L	A	E	V	G	K	K	F	E	K	D	T	G	.	.	I	K	V	T	V	E	H	P	D	K	L	.	.	E	E	K	F	P	Q	V	A	A	T	G	D	G	P	D	I	I	F	W	A
Query Conservation																											.	.												.	.
Alig confidence																											.	.												.	.														.
Template Conservation																																																							.
Template Sequence		D	V	Q	P	A	D	Y	P	T	V	K	A	V	Q	S	X	S	D	E	L	N	K	E	T	N	G	K	I	S	I	K	V	F	P	N	S	Q	L	G	S	E	K	D	T	I	E	Q	V	K	L	G	A	L	.	D	F	I	R	I	N
Template Known Secondary structure			S	S		T	T	S																	T	T	T	S								T	T	T	T													T	S	S	.	S
Template Predicted Secondary structure																																																							.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.									.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.
Query Sequence		H	D	R	F	G	G	Y	A	Q	S	G	L	L	A	E	I	T	P	.	.	.	.	.	.	.	.	D	K	A	F	Q	D	K	L	Y	P	F	T	W	D	A	V	R	Y	N	G	K	L	I	A	Y	P	I	A	V	E	A	L	S	L
Query Conservation																				.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	T	L	N	T	V	C	P	A	X	T	V	P	V	L	P	F	L	F	R	D	K	A	H	X	R	A	V	L	D	G	P	I	G	D	E	I	L	A	D	C	A	S	H	G	L	V	G	L	A	F	Y	D	S	G	A	R	S	F
Template Known Secondary structure						T	T	T		G	G	G					S	T	T		S	S	S										S									T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		117	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	N	K	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	T	T	P	I
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D