Job Description multi-dom Confidence 58.24% Date Sun Sep 7 16:46:09 BST 2014 Rank 210 Aligned Residues 116 % Identity 12% Template c4ovpB_ PDB info PDB header:solute-binding protein Chain: B: PDB Molecule:c4-dicarboxylate transport system substrate-binding PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 sulfitobacter sp. nas-14.1, target efi-510292, with bound alpha-d-3 manuronate Resolution 1.70 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.												.	.
Query SS confidence																						.	.												.	.
Query Sequence		G	D	K	G	Y	N	G	L	A	E	V	G	K	K	F	E	K	D	T	G	.	.	I	K	V	T	V	E	H	P	D	K	L	.	.	E	E	K	F	P	Q	V	A	A	T	G	D	G	P	D	I	I	F	W	A	H	D	R	F	G
Query Conservation																						.	.												.	.
Alig confidence																						.	.												.	.
Template Conservation
Template Sequence		E	H	A	F	T	K	T	L	R	K	F	E	E	L	V	D	E	K	Y	D	G	D	V	T	F	D	L	R	L	N	G	E	L	G	V	E	S	D	Y	V	T	F	L	N	Q	G	V	A	I	D	Y	T	I	L	A	P	S	N	X	A
Template Known Secondary structure		T	S																		S	S									T	T	T	T													T		S		S						G	G	G		T
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.									.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure															.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.
Query Sequence		G	Y	A	Q	S	G	L	L	A	E	I	T	P	.	.	.	.	.	.	.	.	D	K	A	F	Q	D	K	L	Y	P	F	T	W	D	A	V	R	Y	N	G	K	L	I	A	Y	P	I	A	V	E	A	L	S	L	I	Y	N	K	D
Query Conservation															.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.																																							.
Template Conservation																																																													.
Template Sequence		K	F	A	P	S	I	P	L	X	D	X	P	F	L	F	R	D	L	D	H	W	N	A	V	L	S	S	D	V	L	A	P	L	E	D	E	L	L	E	K	A	D	I	K	I	V	G	Y	T	G	G	G	T	R	N	L	L	S	K	.
Template Known Secondary structure		T	T		T	T	G	G	G	G	G		T	T			S	S										S	S	T	T																													S	.
Template Predicted Secondary structure																																																													.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	P	N	P	P	K	T	W	E	E	I
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	Q	P	V	V	T	F	D	D	L
Template Known Secondary structure		.	.	.	S				S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					159	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D