30 c4rknD_ Probab=99.57  E-value=3.2e-15  Score=166.49  Aligned_cols=375  Identities=17%  Similarity=0.221  Sum_probs=0.0  Template_Neff=10.432

Q ss_pred             ccccchhhhhhhhccccccCCcHhhhhccccceeeecCCccccCCCCcccchhhhhcccc
Q Swiss-Prot_ent  345 YPEITEKNMYESFAGLEKGDGIWGDYYSPIPLYTYFNPSRHYVPPESDAYTNLLVKYRPD  404 (852)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~y~~p~~~y~~~~~~~~~~~~~~~~~~  404 (852)
                      |-++.....|....++.....+...-|+..+-.+-..|+.+ +-++.             
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-------------  113 (662)
T c4rknD_          68 WIEEGRGNDFSKASKRSGGEGFSSMMYRVARNSTLQYPNKF-IGPEK-------------  113 (662)
T ss_dssp             CCCGGGHHHHHHTSCGGGGTCCCCCSCCCSSCCTTCSSCCC-CCHHH-------------
T ss_pred             HHhcCCchhhHhhcccccccCchhhhhhhccccccccccCC-cChHH-------------


Q ss_pred             hhhhhhhcCChHHHHHHHhcccccCCCC--------------------------------
Q Swiss-Prot_ent  405 QCVECHEETTPGIVAEWKMSNHANPKKN--------------------------------  432 (852)
Q Consensus       405 ~Ci~CH~~~tPGIV~dW~~S~HA~~~~~--------------------------------  432 (852)
                       |.+||    |.+++.|++|+||++-..                                
T Consensus       114 -C~~CH----~~~~~~w~~s~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (662)
T c4rknD_         114 -CGECH----PAQYETWSRSRHATTIRFPGEHPEVNNKLNDPVFDKDTASILPQGITPDV  168 (662)
T ss_dssp             -HHHHC----HHHHHHHHTSHHHHSEECTTCCGGGTTCSSSCSSSTTSCCSS-TTCCGGG
T ss_pred             -HHHhh----HHHHHHHccCchhhhhcCCCccccccCCCCcceecCCCcceecccccCCc


Q ss_pred             ------------------------------------------------------------
Q Swiss-Prot_ent  433 ------------------------------------------------------------  432 (852)
Q Consensus       433 ------------------------------------------------------------  432 (852)
                                                                                  
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (662)
T c4rknD_         169 VYCTVGHIRTKFGFFDAWLLRGTYHVEGGLLKNGTGQIVAGGNQWQRTWALNLSPEVAKK  228 (662)
T ss_dssp             EEEEEEETTTEEEEEETTCBBCCEEEESSCGGGTCSEEEESCCEEEHCCCCCCCHHHHHH
T ss_pred             eEEEeCCCccccccceEEEEecceeeeeeeeecCCccEEeCCcccchhhhhccCHhHhhh


Q ss_pred             --------------------------------------------HhHhhhcccccc----
Q Swiss-Prot_ent  433 --------------------------------------------PHVSAETQEIEA----  444 (852)
Q Consensus       433 --------------------------------------------~~~~~~~~~~~~----  444 (852)
                                                                  |..||.......    
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~  288 (662)
T c4rknD_         229 IKKWVPDFPVTLEEYGDNGGYVRGLASYAAKYKKSMSFQASTSYCEVCHPWKFDFKNESE  288 (662)
T ss_dssp             HHHHSTTCCCSGGGGGGGCCSSTTEECSSEETTTEEEECBGGGTHHHHSCEEECCSSHHH
T ss_pred             hhhccCCCCccccCCCCCCcccccccCcccccccccccCCCCCcchhhCCCccccccccc


Q ss_pred             ---cccccccccccccccccchhhhccc--cccccccccChhhhhhcCHHHHHHHHhhhh
Q Swiss-Prot_ent  445 ---LIGKELNNWRPGTKDGVYCSYCHGS--DHEKLFMPTVDNSCGACHPKQAAEFIKGRD  499 (852)
Q Consensus       445 ---~~~~~~~~~~~~~~~~V~C~~CH~~--~h~~~~~~~~~~~C~~CH~~e~~e~~~~~~  499 (852)
                         ...............+|.|..||+.  .+...... .+..|.+||......-...  
T Consensus       289 ~~~~~~~~~~~~~~~~~~~v~Ce~CHg~~~h~~~~~~~-~~~~C~~CH~~~~~~~~~~--  345 (662)
T c4rknD_         289 FYAALGNAKELQKHTISKGVSCEECHGAGGHLEGGSGL-LISNCERCHQRFSYSPDLM--  345 (662)
T ss_dssp             HHHHTTCHHHHHHTEEEESSCHHHHHCTTTTSTTSCCC-CCCCSHHHHTCEEECHHHH--
T ss_pred             cccccccccccccccccCCCchhhcCCccccccccccc-ccchhhhhhcccccCCccc--


Q ss_pred             hcCCcchhhhhhhhcchhhhhhcccccccccchhhh-cc------------cCCCccccc
Q Swiss-Prot_ent  500 HGRPNHPQSWEGNVSTPWYAEYYRRGEGYSMVGCDQ-CH------------QNMSSCDDC  546 (852)
Q Consensus       500 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GC~~-CH------------gs~g~C~aC  546 (852)
                           .............+...+..       .|.. ||            ....+|..|
T Consensus       346 -----~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~s~~~~~~~~C~~C  393 (662)
T c4rknD_         346 -----RNNPLNAGKPDLALSSKFKS-------MGPGCCGSEGSQTYFTAHYEKGMRCATC  393 (662)
T ss_dssp             -----HTCGGGTTCGGGGEEECEET-------TEEBT-TCHHHHHHTSHHHHTTCCHHHH
T ss_pred             -----ccccccccccccchhhhccc-------cccccccccccccccccccCCCCcCCCc


Q ss_pred             cCccccCHHH------------------------cCChhHhhccCCCCCccchhhhhhcC
Q Swiss-Prot_ent  547 HSRHRFSAAE------------------------ARRPEACSICHMGPDHPDWESYSRSK  582 (852)
Q Consensus       547 HtRH~FS~~e------------------------ARkP~aC~~CHlGpDHPq~EiY~~SK  582 (852)
                      |..|.+....                        +..+..|.+||.+             
T Consensus       394 H~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~CH~~-------------  440 (662)
T c4rknD_         394 HDPHDVTGNVTGEKGIKGVSYNSEQGYLSSLYSKPKLKKECTDCHKE-------------  440 (662)
T ss_dssp             BCSSCCSCSCCCCTTCCCSSCCTTSGGGGCSCCCCCBSCCHHHHCHH-------------
T ss_pred             CCCCCCCCCcccccccccccccccccccccccccccccChhhhcccc-------------


Q ss_pred             CceeeeeccccccccccccccccCCCcCCCcceeeeeecCCC-------------Ccccc
Q Swiss-Prot_ent  583 WGVIYETTKERWNWDKNLAEVIPGEDYLAPTCQYCHMYVGNN-------------KWEMN  629 (852)
Q Consensus       583 HG~iy~~~~~~~n~~~~~~~w~~G~Dy~APTCatCHM~~g~~-------------~~thn  629 (852)
                                      ....+.....-..++|.+|||+....             ...-+
T Consensus       441 ----------------~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~~~~~~~~~~  484 (662)
T c4rknD_         441 ----------------QAYIQSKADTHSKNSCASCHMPFMMSCCENFYAIQFQDQAGFDT  484 (662)
T ss_dssp             ----------------HHHHHHSSSTTTTSCHHHHHSCCCBBS-SCCGGGCBGGGTBSSC
T ss_pred             ----------------cccccccCCCCCCCCCcccCCCccCCcccCcccccCCccccccc


Q ss_pred             cccceeeccccccccccccccCcccccccccccccccccccChhHHHHHHHHHHHHH---
Q Swiss-Prot_ent  630 VETKGIWRMGVIPPKEVEFKSGLKDFPYGIKIPPMDKKLEIYSAESQEKRRKWVELC---  686 (852)
Q Consensus       630 v~~r~~w~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~e~~~~R~~m~~vC---  686 (852)
                      +...-.|.+...+....      ...|..-......+.+.+...+....-..+...|   
T Consensus       485 ~~~~h~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~  538 (662)
T c4rknD_         485 QRRAHIWKIDVDPARKS------LVAGSTSKDPRDGKDWHFERNEEGRNFVDLMWACART  538 (662)
T ss_dssp             CBCCCCC-B-CCSSCCS------EECCTTCCSTTSCTTCEECCCTTSCCCBCHHHHHHCC
T ss_pred             cccceeeccccCccccc------cCCCCCccCcccccCceeeeccCCCcccccccccccc


Q ss_pred             ----------HhccChHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q Swiss-Prot_ent  687 ----------SKCHSSRFA-----------GMWLDSLDQYMFESWRRIDEAQLIIEKLFS  725 (852)
Q Consensus       687 ----------~~CHS~~fa-----------~~~~~~~D~~v~e~~~~~~eA~~~v~~l~~  725 (852)
                                ..||++...           ++.+...+....+....+++..+.|+.+.+
T Consensus       539 ~~~~~~~~~c~~CH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  598 (662)
T c4rknD_         539 TWADKDQAEAKGCHSPVVSELKETLHFKDQKQVYNEVMGWQTPVKDKFTQVKVGIQGLYS  598 (662)
T ss_dssp             CSSCHHHHHTTTTTCTTTCCSCGGGCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCcccccCCCCCchhhhccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH


Q ss_pred             cCCcccCcccccccccccchhhcccccccccccccccccccccccccccccccccccccc
Q Swiss-Prot_ent  726 ENAIEPPPEKRPPFPLSDLIIKVLGAEKLGAEMYRLFKQTNGHLPVIGPILGAYSIFTQN  785 (852)
Q Consensus       726 ~Gll~~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~f~~~~~~~p~~~~~~~~~~~~~~~  785 (852)
                      .-....                                                      
T Consensus       599 ~~~~~~------------------------------------------------------  604 (662)
T c4rknD_         599 LLEVKK------------------------------------------------------  604 (662)
T ss_dssp             HHTTSC------------------------------------------------------
T ss_pred             HHhhcc------------------------------------------------------


Q ss_pred             cccccHHHHHHHHHHHHhhhhHhHhHhhcCCchhhh-ccHHHHHHHHHHHHHHHHHHHHh
Q Swiss-Prot_ent  786 EGNPGGIEREYAEMWFWSHLQGYKGAAHAQPDISWW-WGTAQGVGNLTRIRDEAEKLRRL  844 (852)
Q Consensus       786 ~~~~s~iE~~~~~mw~~~~~r~~~Ga~h~~PDYa~W-~G~~~~~~~l~~i~~~a~~lRr~  844 (852)
                            +...-..-+......++.-.....-|-+|+ |+..-.++.|.+..+.+++.+.+
T Consensus       605 ------~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~  658 (662)
T c4rknD_         605 ------LAPSDKTRVYELIEKAQDTVDLIEKDGSWGMHGFKYTKQRLDAAVEYINEAQRI  658 (662)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHHHHCSTTTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------ccccchhHHHHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHHHHHHh


Q ss_pred             hccc
Q Swiss-Prot_ent  845 KSGS  848 (852)
Q Consensus       845 ~~g~  848 (852)
                      -.++
T Consensus       659 ~~~~  662 (662)
T c4rknD_         659 MKKS  662 (662)
T ss_dssp             HTTC
T ss_pred             hcCC


