24 c4rknA_ Probab=99.59  E-value=1.3e-15  Score=169.64  Aligned_cols=367  Identities=18%  Similarity=0.229  Sum_probs=0.0  Template_Neff=10.451

Q ss_pred             ccccchhhhhhhhccccccCCcHhhhhccccceeeecCCccccCCCCcccchhhhhcccc
Q Swiss-Prot_ent  345 YPEITEKNMYESFAGLEKGDGIWGDYYSPIPLYTYFNPSRHYVPPESDAYTNLLVKYRPD  404 (852)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~y~~p~~~y~~~~~~~~~~~~~~~~~~  404 (852)
                      |-++.....|....|.-+-..+...-|+..+-.+-..|+.+ +-++.             
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~-------------  112 (660)
T c4rknA_          67 WIEEGRGNDFSKASKRSGGEGFSSMMYRVARNSTLQYPNKF-IGPEK-------------  112 (660)
T ss_dssp             CCCGGGHHHHHHHSCGGGGTSCCCCSCCCSSCCTTSSSCCC-CCHHH-------------
T ss_pred             HHhcCCchhHHHhccccccccchhhhhccCCCccccCcccC-CCcHH-------------


Q ss_pred             hhhhhhhcCChHHHHHHHhcccccCCC---------------------------------
Q Swiss-Prot_ent  405 QCVECHEETTPGIVAEWKMSNHANPKK---------------------------------  431 (852)
Q Consensus       405 ~Ci~CH~~~tPGIV~dW~~S~HA~~~~---------------------------------  431 (852)
                       |.+||    |.+.++|++|+||++-.                                 
T Consensus       113 -C~~CH----~~~~~~w~~s~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (660)
T c4rknA_         113 -CGECH----PAQYETWSRSRHATTIRFPGEHPEVNNKLNDPVFDKDTASILPQGITPDV  167 (660)
T ss_dssp             -HHHHC----HHHHHHHHTSHHHHSEECTTCCGGGTTCSSSCSSSTTSCCSS-TTCCGGG
T ss_pred             -HHHhC----HHHHHHhccCcccccccCCCccccccCcCCCccccCCCceeccccccCcc


Q ss_pred             ------------------------------------------------------------
Q Swiss-Prot_ent  432 ------------------------------------------------------------  431 (852)
Q Consensus       432 ------------------------------------------------------------  431 (852)
                                                                                  
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (660)
T c4rknA_         168 VYCTVGHIRTKFGFFDAWLLRGTYHVEGGLLKNGTGQIVAGGNQWQRTWALNLSPEVAKK  227 (660)
T ss_dssp             EEEEEECTTSEEEEEETTCBBCCEEEESSCGGGTCSEEEESCCEEEHCCCCCCCHHHHHH
T ss_pred             EEEEeCCCccccccceeeEeeccEeeecccccCCCceEEeCCccchhhHHhhcCHHHHhh


Q ss_pred             -------------------------------------------CHhHhhhcccccccc--
Q Swiss-Prot_ent  432 -------------------------------------------NPHVSAETQEIEALI--  446 (852)
Q Consensus       432 -------------------------------------------~~~~~~~~~~~~~~~--  446 (852)
                                                                 .|..||.........  
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~  287 (660)
T c4rknA_         228 IKKWVPDFPVTLEEYGDNGGYVRGLASYAAKYKKSMSFQASTSYCEVCHPWKFDFKNESE  287 (660)
T ss_dssp             HHHHSTTCCCSGGGGGGGCCSSTTEECSSEETTTEEEECBGGGTHHHHSCEEECCSSHHH
T ss_pred             hhhccCCCccchhccCCCCcccccccccccccccccccCCCCCcchhhCcCccccccccc


Q ss_pred             -----cccccccccccccccchhhhccc-cccccccccChhhhhhcCHHHHHHHHh----
Q Swiss-Prot_ent  447 -----GKELNNWRPGTKDGVYCSYCHGS-DHEKLFMPTVDNSCGACHPKQAAEFIK----  496 (852)
Q Consensus       447 -----~~~~~~~~~~~~~~V~C~~CH~~-~h~~~~~~~~~~~C~~CH~~e~~e~~~----  496 (852)
                           .............+|.|..||+. .|........+..|.+||.+....-..    
T Consensus       288 ~~~~~~~~~~~~~~~~~~~v~Ce~CHg~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~  347 (660)
T c4rknA_         288 FYAALGNAKELQKHTISKGVSCEECHGAGGHLEGGSGLLISNCERCHQRFSYSPDLMRNN  347 (660)
T ss_dssp             HHHHTTCHHHHHHTEEEESSCHHHHHCTTTTSTTSCCCCCCCSHHHHCCEEECHHHHHTC
T ss_pred             cccccccchhcccccccCCCchhhcCCCCCccccccccccccchhccccccccccccccc


Q ss_pred             --hhhhcCCcchhhhhhhhcchhhhhhcccccccccchhhhccc------------CCCc
Q Swiss-Prot_ent  497 --GRDHGRPNHPQSWEGNVSTPWYAEYYRRGEGYSMVGCDQCHQ------------NMSS  542 (852)
Q Consensus       497 --~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GC~~CHg------------s~g~  542 (852)
                        ............+..                    .|..||.            ...+
T Consensus       348 ~~~~~~~~~~~~~~~~~--------------------~c~~ch~~~~~~~~s~~~~~~~~  387 (660)
T c4rknA_         348 PLNAGKPDLALSSKFKS--------------------MGPGCGSEGSQTYFTAHYEKGMR  387 (660)
T ss_dssp             GGGTTCGGGGEEECEET--------------------TEEBTTCHHHHHHTSHHHHTTCC
T ss_pred             ccccccccccccccccc--------------------cccccCcccccccccccCCCCCc


Q ss_pred             cccccCccccCHHH------------------------cCChhHhhccCCCCCccchhhh
Q Swiss-Prot_ent  543 CDDCHSRHRFSAAE------------------------ARRPEACSICHMGPDHPDWESY  578 (852)
Q Consensus       543 C~aCHtRH~FS~~e------------------------ARkP~aC~~CHlGpDHPq~EiY  578 (852)
                      |..||..|.++...                        .+.+..|.+||..    +.+++
T Consensus       388 C~~CH~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~CH~~----~~~~~  443 (660)
T c4rknA_         388 CATCHDPHDVTGNVTGEKGIKGVSYNSEQGYLSSLYSKPKLKKECTDCHKE----QAYIQ  443 (660)
T ss_dssp             HHHHBCSSCCSCSCCCCTTCCCSSCCTTSGGGGCSCCCCCBSCCHHHHCHH----HHHHH
T ss_pred             hhhcCcccCCCcccccccccccccccccccccccccccCccCchhhhhccC----hhhcc


Q ss_pred             hhcCCceeeeeccccccccccccccccCCCcCCCcceeeeeecCCC------------Cc
Q Swiss-Prot_ent  579 SRSKWGVIYETTKERWNWDKNLAEVIPGEDYLAPTCQYCHMYVGNN------------KW  626 (852)
Q Consensus       579 ~~SKHG~iy~~~~~~~n~~~~~~~w~~G~Dy~APTCatCHM~~g~~------------~~  626 (852)
                      ..+.+.                         ..++|.+|||+....            ..
T Consensus       444 ~~~~~~-------------------------~~~~C~~CH~~~~~~~~~~~~~~~~~~~~  478 (660)
T c4rknA_         444 SKADTH-------------------------SKNSCASCHMPFMMSCENFYAIQFQDQAG  478 (660)
T ss_dssp             TSSSTT-------------------------TTSCHHHHHSCCCBBSSCCGGGCBGGGTB
T ss_pred             ccCCCC-------------------------CCCcccccCCCCCcccccccccccCCccc


Q ss_pred             ccccccceeeccccccccccccccCcccccccccccccccccccChhHHHHHHHHHHHHH
Q Swiss-Prot_ent  627 EMNVETKGIWRMGVIPPKEVEFKSGLKDFPYGIKIPPMDKKLEIYSAESQEKRRKWVELC  686 (852)
Q Consensus       627 thnv~~r~~w~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~e~~~~R~~m~~vC  686 (852)
                      ..++...-.|.+...+....      ...|.+-......+.+.+...+.-.....+...|
T Consensus       479 ~~~~~~~h~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c  532 (660)
T c4rknA_         479 FDTQRRAHIWKIDVDPARKS------LVAGSTSKDPRDGKDWHFERNEEGRNFVDLMWAC  532 (660)
T ss_dssp             SCCCBCCCCCCBCCCSSCCS------EECCTTCSSTTSCCSCEECCCTTSCCCBCHHHHH
T ss_pred             ccchhhccccccccChhhcc------cCCcCCcCCCCccccceeeeccCCCcccCccccC


Q ss_pred             -------------HhccChHHH--------------HHHHHHHHHHHHHHHHHHHHHHHH
Q Swiss-Prot_ent  687 -------------SKCHSSRFA--------------GMWLDSLDQYMFESWRRIDEAQLI  719 (852)
Q Consensus       687 -------------~~CHS~~fa--------------~~~~~~~D~~v~e~~~~~~eA~~~  719 (852)
                                   ..||++...              .+.+....+-|++....+..+.+.
T Consensus       533 ~~~~~~~~~~~~c~~CH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  592 (660)
T c4rknA_         533 ARTTWADKDQAEAKGCHSPVVSELKETLHFKDQKQVYNEVMGWQTPVKDKFTQVKVGIQG  592 (660)
T ss_dssp             HCCCSSCHHHHHTTTTTCTTTCCSCGGGCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCCCccCCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH


Q ss_pred             HHHHHhcCCcccCcccccccccccchhhcccccccccccccccccccccccccccccccc
Q Swiss-Prot_ent  720 IEKLFSENAIEPPPEKRPPFPLSDLIIKVLGAEKLGAEMYRLFKQTNGHLPVIGPILGAY  779 (852)
Q Consensus       720 v~~l~~~Gll~~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~f~~~~~~~p~~~~~~~~~  779 (852)
                      ++++.+..-+......                                            
T Consensus       593 ~~~~~~~~~~~~~~~~--------------------------------------------  608 (660)
T c4rknA_         593 LYSLLEVKKLAPSDKT--------------------------------------------  608 (660)
T ss_dssp             HHHHTTCSSSCHHHHH--------------------------------------------
T ss_pred             HHHHHhhccCCccchh--------------------------------------------


Q ss_pred             cccccccccccHHHHHHHHHHHHhhhhHhHhHhhcCCchhhh-ccHHHHHHHHHHHHHHH
Q Swiss-Prot_ent  780 SIFTQNEGNPGGIEREYAEMWFWSHLQGYKGAAHAQPDISWW-WGTAQGVGNLTRIRDEA  838 (852)
Q Consensus       780 ~~~~~~~~~~s~iE~~~~~mw~~~~~r~~~Ga~h~~PDYa~W-~G~~~~~~~l~~i~~~a  838 (852)
                                  -.+.+..       .++.-......|-+|. |+....++.|.+..+.+
T Consensus       609 ------------~~~~~~~-------~a~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~  649 (660)
T c4rknA_         609 ------------RVYELIE-------KAQDTVDLIEKDGSWGMHGFKYTKQRLDAAVEYI  649 (660)
T ss_dssp             ------------HHHHHHH-------HHHHHHHHHHHHCSTTTTCHHHHHHHHHHHHHHH
T ss_pred             ------------HHhHHHH-------HHHHHHHHHHhCCCccCcCHHHHHHHHHHHHHHH


Q ss_pred             HHHHHhhccc
Q Swiss-Prot_ent  839 EKLRRLKSGS  848 (852)
Q Consensus       839 ~~lRr~~~g~  848 (852)
                      ++.+++-.+.
T Consensus       650 ~~~~~~~~~~  659 (660)
T c4rknA_         650 NEAQRIMKKS  659 (660)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHhcc


