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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank108Aligned Residues260
% Identity18%Templatec7z5pA_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: copper oxidase; PDBTitle: bilirubin oxidase from bacillus pumilus
PDB Entry: PDBe RCSB PDBj
Resolution2.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50......... 60.........70.........80.........90....
Predicted Secondary structure 







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Query Sequence  DGAVHLEMEAKPLTIEPRPGVFFD. AWGYCLKGDVPTVPGPVIKVREGTKVKILFRNKLT
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Template Conservation                               
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Template Sequence  PRQTYYEIAMEEVFLKVHRDLPPTKLWTYNGS. . . . . LPGPTIHANRNEKVKVKWMNKLP
Template Known Secondary structure  SS

SSTTS..TTB.....SSTT



Template Predicted Secondary structure 














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   95....100.........110.........120...... ...130.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . VPASIHPHGVKYTTANVGVNIAGNPASIVAPG. . . DSRIF
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Template Conservation                           
 

                      
        
Template Sequence  LKHFLPVDHTIHEGHHDEPEVKTVVHLHGGVTPASSDGYPEAWFSRDFEATGPFFEREVY
Template Known Secondary structure  SS
SS


TTSS


TT

S

B
T



GGGT

TTS
B
GGGSSB
TT


SS
Template Predicted Secondary structure 



















































   132.......140.........150.........160.........170..... ....180........
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Query Sequence  EWDTAGTPGTWFYHSYVFERGGEEGLSRGLWGALIVEPVGGDPN. . . PPDKEFVVFMHAF
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Template Conservation          

  

 
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Template Sequence  EYPNHQQACTLWYHDHAMA. LTRLNVYAGLAGFYLISDAFEKSLELPKDEYDIPLMIMDR
Template Known Secondary structure 


S
S

TT.TTT

TTTGGG



GGG
Template Predicted Secondary structure 














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   189190.........200.... .....210......
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Query Sequence  NVNGQEYYAFNNKSGD. . . . . . . . . . . . . . . . . IELMRGDSSAFP. . . . . . . . . . . . . . .
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Template Conservation                                        


             
 
 

Template Sequence  TFQEDGALFYPSRPNNTPEDSDLPDPSIVPFFCGETILVNGKVWPYLEVEPRKYRFRILN
Template Known Secondary structure 
B
TTS
B


SS
S

GGG
S

SS


S



STTS


SS
Template Predicted Secondary structure 




































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                     
  

     
       
  
 
                 
Template Sequence  ASNTRTYELHLDNDATILQIGSDGGFLPRPVHHQSFTIAPAERFDVIIDFSAYENKTITL
Template Known Secondary structure 

SS

TT



TT

S
TT

GGGTT
Template Predicted Secondary structure 






























  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  KNKAGCGQEVNPETDANIMQFKVTRPLKGPKTLRIFKPLPPLRPSRADQERTLTLTGTQD
Template Known Secondary structure 


SSS...TTTTTTTS

SS




S




SS




S
Template Predicted Secondary structure 











































   217..220.........230.........240.........250.....
Predicted Secondary structure  ................



















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Query Sequence  . . . . . . . . . . . . . . . . GETWKAKMGDKVRFHLINITEEAHTFHTHGHRWLDKSCD. . . . .
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Template Conservation           
              
        
     

 



  
 
         
Template Sequence  KYGRPILLLDNHFWNDPVTENPRLGSVEVWSIVNPTRGTHPIHLHLVQFRVIDRRPFDTE
Template Known Secondary structure  TTS
TTB
TTS..
B


TT

SSS

SS

B

S
Template Predicted Secondary structure 







































   256...260.........270..... ....280.........290..
Predicted Secondary structure  ......................





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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . KLIDTIGLNPFDSYVLDFVA. GEGVGKGNWAFHCQSQE
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Template Conservation                           

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Template Sequence  VYQSTGDIVYTGPNEAPPLHEQGYKDTIQAHAGEVIRIIARFVPY. . . SGRYVWHCHILE
Template Known Secondary structure  S




SS

B...TTTSS
BS

TT

S
...
S
Template Predicted Secondary structure 






























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   293......300....
Predicted Secondary structure 


Query Sequence  HMMNGMFGIFMV
Query Conservation 
   



 
 
Alig confidence 











Template Conservation 
   

      
Template Sequence  HEDYDMMRPMDI
Template Known Secondary structure  TT
Template Predicted Secondary structure 






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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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