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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank50Aligned Residues259
% Identity22%Templatec2zooA_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: probable nitrite reductase; PDBTitle: crystal structure of nitrite reductase from pseudoalteromonas2 haloplanktis tac125
PDB Entry: PDBe RCSB PDBj
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90...
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Query Sequence  GKDGAVHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRNKL
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Template Sequence  DHSAKVVINLETREQVGRIADGVEYVFWSFGET. . . . . VPGSFIRVREGDEIEFNLSNHP
Template Known Secondary structure  SS

TTTTB.....SS

BTT

T
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   94 .....100.........110.........120.........130.........140.........150.
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Query Sequence  T. . VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFER
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Template Sequence  SSKMPHNIDLHAVTGP. . . . . . . GGGAESSFTAPGHTSTFNF. KALNPGLYIYHCATA. .
Template Known Secondary structure  T
SS
B

TT

SG.......GGGGGG

B
TT
.

S


.S..
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   152.......160.........170.........180.........190.........200. ...
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Query Sequence  GGEEGLSRGLWGALIVEPVGGDPNPPDKEFVVFMHAFNVNGQEYYAFNNK. . . . . . . SGD
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Template Conservation          
  
   
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Template Sequence  PVGMHIANGMYGLILVEPKE. GLAPVDREYYLVQGDFYTKGEFGEAGLQPFDMAKAIDED
Template Known Secondary structure  STT

TT.
...
S
BSS
TT

.B
TT
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   205....210......... 220.........230...... ...240.........250......
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Query Sequence  IELMRGDSSAFPGET. . . WKAKMGDKVRFHLINIT. EEAHTFHTHGHRWLDKSCDK. . . .
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Template Sequence  ADYVVFNGSVGSTTDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSLK
Template Known Secondary structure 
STTSTTTTSGGG
TT
SS

T

BSGGGSS
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   257..260.........270.........280.........290.... .....300.........310.
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Query Sequence  . . LIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHM. MNGMFGIFMVEEGKRVN
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Template Conservation                         ... 
                              
Template Sequence  NHNVQTTLIPAGGAAIVEFKVEV. . . PGTFILVDHSIFRAFNKGALAMLKVEGPDDHS
Template Known Secondary structure 
SBS
TT

S...
SSTTTS
S


TT
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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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