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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank29Aligned Residues255
% Identity25%Templatec4ystA_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: nitrite reductase; PDBTitle: structure of copper nitrite reductase from geobacillus2 thermodenitrificans - 24.9 mgy
PDB Entry: PDBe RCSB PDBj
Resolution1.34 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.
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Query Sequence  LTGKDGAVHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRN
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Template Sequence  ERVGPHDVHIEMTAQITDIEIDKGKIYKAWTFNGQ. . . . . APGPLVVVNEGDTIHFTLKN
Template Known Secondary structure  TTTTTTB.....SS


TT
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   92... ....100.........110.........120.........130.........140.........150
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Query Sequence  KLTV. PASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFE
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Template Sequence  MDPVVPHSMDFHAVHASPSKD. . . . . . . . FIDVMPNKSGTFTYPA. NKPGVFMYHCGTKP
Template Known Secondary structure 

SS

B

TTS


........S

B
TT
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S


.SS
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   151........160.........170..... ....180.........190.........200........
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Query Sequence  RGGEEGLSRGLWGALIVEPVGGDPN. . PPDKEFVVFMHAFNVNGQEYYAFNNKSGDIELM
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Template Sequence  . . VLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYND. MNDFQNGVPSYVVF
Template Known Secondary structure  ..TT

TT

TTGGG


STT
.S..S
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   209210.........220.........230...... ...240.........250.....
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Query Sequence  . . . . . . . . . . . . RGDSSAFPGETWKAKMGDKVRFHLINIT. EEAHTFHTHGHRWLDKSCD
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Template Conservation              

              
        
                     
Template Sequence  SSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLD
Template Known Secondary structure 

SSTT




SBSSS
TT.SS

TT

T
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   256 ...260.........270.........280.........290.........300......
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Query Sequence  K. . . . . . . LIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHMMNGMFGIFMVEE
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Template Conservation                   
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Template Sequence  GNPNNHLQGMQTVMLPASGGAVVEFTVTR. . . PGTYPIVTHQFNHAQKGAVAMLKVTE
Template Known Secondary structure  T
TTSS

TT


S...SSSTT

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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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