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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank55Aligned Residues257
% Identity22%Templatec6f5kA_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: extracellular laccase, lcc1; PDBTitle: crystal structure of laccase from myceliophthora thermophila
PDB Entry: PDBe RCSB PDBj
Resolution1.62 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.... ..... 50...... ...60... ......70.........80.........90
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Query Sequence  DGAVHLEME. . AKPLT. IEPRPGV. FFDAWGY. CLKGDVPTVPGPVIKVREGTKVKILFR
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Template Conservation                                   

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Template Sequence  GVVRPYTLTTLLTEVDNWTGPDGVVKEKVMLVNNNS. . . . . IIGPTIFADWGDTIQVTVI
Template Known Secondary structure 

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TTS.TT.B.....SSTT
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   91... ... ..100.........110.........120..... ....130.........140......
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Query Sequence  NKLT. . VPA. SIHPHGVKYTTANVGVNIAGNPASIVAP. GDSRIFEWDTAGTPGTWFYHS
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Template Conservation 
 
        

 

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Template Sequence  NNLEETNGTSSIHWHGL. QKGTNLHDGANGITECPIPPKGGRKVYRF. KAQQYGTSWYHS
Template Known Secondary structure 
S.S

B
.T
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TT
GGGS

BTTTB..B.TTT.

S
Template Predicted Secondary structure 









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   147..150.........160. ........170.........180.........190... ......200..
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Query Sequence  YVFERGGEEGLSRGL. WGALIVEPVGGDPNPPDKEFVVFMHAFNVNGQ. . . EYYAFNNKS
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Template Conservation 
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Template Sequence  HF. . . . . SAQYGNGVVVGAIQINGPASLPYDTD. LGVFPISDYYYSSADELVELTKNSGA
Template Known Secondary structure 
S.....TTGGGGT
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SS

S.
SS
S..
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   203......210........ .220.........230.....
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Query Sequence  GDIELMRGDSSAFPGE. . . . . . . TWKAKMGDKVRFHLINI. . . . . . . . . . . . . . . . . . . .
Query Conservation   
    



   
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Template Conservation         


                   
   
 
 

          
      

  
Template Sequence  PFSDNVLFNGTAKHPETGEGEYANVTLTPGRRHRLRLINTSVENHFQVSLVNHTMTIIAA
Template Known Secondary structure  ..BSTTB
B
TTT

B


.TT


SS

TTB
Template Predicted Secondary structure 




























  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation 

    
       
  
 
 

 
       
                           
Template Sequence  DMVPVNAMTVDSLFLGVGQRYDVVIEEASRTPGNYWFNVTFGGGLLCGGSRNPYPAAIFH
Template Known Secondary structure  TTS

TT
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S.SS

GGGTT

BSSSS
Template Predicted Secondary structure 































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  YAGAPGGPPTDEGKAPVDHNCLDLPNLKPVVARDVPLSGFAKRPDNTLDVTLDTTGTPLF
Template Known Secondary structure  TTS

S

S



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TT


S


BSS

B


SS



GGG
SSSSS
Template Predicted Secondary structure 


















































   236...240
Predicted Secondary structure  .......................................................




Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TEEAH
Query Conservation  .......................................................
   
Alig confidence  .......................................................




Template Conservation      
                                            
         
Template Sequence  VWKVNGSAINIDWGRPVVDYVLTQNTSFPPGYNIVEVNGADQWSYWLIENDPGAPFTLPH
Template Known Secondary structure  TTB




TTS
TT




GGG

STT

TT
S



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   241........250...... ...260.........270...
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Query Sequence  TFHTHGHRWLDKSCDK. . . . . . . . . . . . . . . . . . . . . . . . . . . LIDTIGLNPFDSYVLDF
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Template Conservation 
 



  
 
                                  


 
       

 
Template Sequence  PMHLHGHDFYVLGRSPDESPASNERHVFDPARDAGLLSGANPVRRDVTMLPAFGWVVLAF
Template Known Secondary structure  SSS
S..

TTS






GGG


BS
S
TT
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   274.....280.........290.........300........
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Query Sequence  VAGEGVGKGNWAFHCQSQEHMMNGMFGIFMVEEGK
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Template Conservation      ...

 
  



  
   

          
Template Sequence  RADN. . . PGAWLFHCHIAWHVSGGLGVVYLERADD
Template Known Secondary structure 

S...
SSTT

Template Predicted Secondary structure 


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Download:Text version FASTA version

No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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