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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank63Aligned Residues266
% Identity21%Templatec1v10A_
PDB info PDB header: oxidaseChain: A: PDB Molecule: laccase; PDBTitle: structure of rigidoporus lignosus laccase from hemihedrally twinned2 crystals
PDB Entry: PDBe RCSB PDBj
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90....
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Query Sequence  GAVHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRNKLT. .
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Template Sequence  ATVALDLHILNANLDPDGTGARSAVTAEGT. . . . . TIAPLITGNIDDRFQINVIDQLTDA
Template Known Secondary structure 

S
TTSS

SSS.....SS...TT




T
Template Predicted Secondary structure 










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   95....100.........110.........120.........130.........140.........150.
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Query Sequence  . . . VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFER
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Template Sequence  NMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHL. . .
Template Known Secondary structure  TS


B
T


TT
GGGS

BTTTB..B.TT
TT


S...
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   152.......160.........170....... ..180.........190.........200.......
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Query Sequence  GGEEGLSRGLWGALIVEPVGGDPNPP. . . . DKEFVVFMHAFNVNGQEYYAFNNKSGDIEL
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Template Sequence  . . STQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLST. . . KAPPAPDTTL
Template Known Secondary structure  ..TTGGGGT

TT
TTGGG
SB
SGGG
SS
SS...SS
S

S
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   208.210.... .....220.........230.....
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Query Sequence  MRGDSSA. . . . . . FPGETWKAKMGDKVRFHLINI. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  INGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQ
Template Known Secondary structure  TTB


SS
GGGS...
TT


SS

TT

TT
Template Predicted Secondary structure 






























  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation          
  
 
                                              
Template Sequence  PLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEP
Template Known Secondary structure  SB
TT


S
SSSSSS
S
GGGTTTT

S


Template Predicted Secondary structure 

































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                     
        
Template Sequence  TTSQNSGTALNEANLIPLINPGAPGNPVPGGADINLNLRIGRNATTADFTINGAPFIPPT
Template Known Secondary structure 
...

S
B

GGG

BSS



SS
SSTT
SS



SSSS

SS





S
Template Predicted Secondary structure 













































   236...240.........250......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TEEAHTFHTHGHRWLDKSCDK. .
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Template Conservation                                           

 
 

  
         
Template Sequence  VPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPGGGNHPFHLHGHNFDVVRTPGSS
Template Known Secondary structure  S
T


GGGSSSTTT
TT


BS
SS


TT
S
Template Predicted Secondary structure 


































   257..260..... ....270.........280.........290.........300.......
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Query Sequence  . . . . . . . . LIDTIGLNP. FDSYVLDFVAGEGVGKGNWAFHCQSQEHMMNGMFGIFMVEEG
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Template Conservation            

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Template Sequence  VYNYVNPVRRDVVSIGGGGDNVTFRFVTDN. . . PGPWFLHCHIDWHLEAGLAVVFAEDIP
Template Known Secondary structure 



SS

S

BSS


S...
S
TTT
SGG
Template Predicted Secondary structure 
















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   308.310........
Predicted Secondary structure 






Query Sequence  KRVNAVIASCD
Query Conservation             
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Template Conservation             
Template Sequence  NIPIANAISPA
Template Known Secondary structure  GS


Template Predicted Secondary structure 






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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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