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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank54Aligned Residues258
% Identity22%Templatec6qq0A_
PDB info PDB header: metal binding proteinChain: A: PDB Molecule: copper-containing nitrite reductase; PDBTitle: crystal structure of nitrite bound y323e mutant of haem-cu containing2 nitrite reductase from ralstonia pickettii
PDB Entry: PDBe RCSB PDBj
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90...
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Query Sequence  GKDGAVHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRNKL
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Template Sequence  TYPAKVIVELEVVEKEMQISEGVSYTFWTFGGT. . . . . VPGSFIRVRQGDTVEFHLKNHP
Template Known Secondary structure  SS

TTSSS.....SS

BTT

T
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   94 .....100.........110.........120.........130.........140.........150.
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Query Sequence  T. . VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFER
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Template Sequence  SSKMPHNIDLHGVTGPGG. . . . . . . GAASSFTAPGHESQFTF. KALNEGIYVYHCATA. .
Template Known Secondary structure  T
SS
B

TT

SGGG.......GGGG

B
TT
.

S



S..
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   152.......160.........170.........180.........190. ........200....
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Query Sequence  GGEEGLSRGLWGALIVEPVGGDPNPPDKEFVVFMHAFNVN. . . . . . . GQEYYAFNNKSGD
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Template Conservation          
  
   
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Template Sequence  PVGMHIANGMYGLILVEPPE. GLPKVDHEYYVMQGDFYTAGKYREKGLQPFDMEKAIDER
Template Known Secondary structure  STT

TT.
...
S
BSS.TT

..B
TT
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   205....210...... ...220.........230...... ...240.........250......
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Query Sequence  IELMRGDSSAFP. . . GETWKAKMGDKVRFHLINIT. EEAHTFHTHGHRWLDKSCDK. . . .
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Template Conservation        
                
        
                           
Template Sequence  PSYVLFNGAEGALTGDKALHAKVGETVRIFVGNGGPNLVSSFHVIGAIFDQVRYEGGTNV
Template Known Secondary structure 
STTSTTTTSGGG
TT
SS..T

BSTT
S

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   257..260.........270.........280.........290.... .....300.........310
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Query Sequence  . . LIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHM. MNGMFGIFMVEEGKRV
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Template Conservation                         ... 
                             
Template Sequence  QKNVQTTLIPAGGAAVVKFTARV. . . PGSYVLVDHSIFRAFNKGAMAILKIDGAENK
Template Known Secondary structure  B
SBS
TT


S...
SSS

S


T
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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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