Return to main results Retrieve Phyre Job Id

Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence98.32%DateWed Nov 27 10:14:46 GMT 2024
Rank135Aligned Residues158
% Identity19%Templatec1duwA_
PDB info PDB header: electron transportChain: A: PDB Molecule: nonaheme cytochrome c; PDBTitle: structure of nonaheme cytochrome c
PDB Entry: PDBe RCSB PDBj
Resolution1.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   405....410... ......420........ .430.........440.. .......450..
Predicted Secondary structure 

..





.........







.









Query Sequence  QCVECHEET. . TPGIVAEWKMSNHAN. . . . . . . . . PKKNPHVSAETQEI. EALIGKELNN
Query Conservation   

 

   ..




 

  
 

 .........              .          
Alig confidence 








..














.........













.


.......
Template Conservation   
  

                 
               
  

         .......
Template Sequence  ACSTCHTTEGKAEGNFVTLDRAMHATNIAKRAKGNTPVSCVSCHEQQTKERRE. . . . . . .
Template Known Secondary structure 
GGGT

SS

GGGTT



S....SSS




S.......
Template Predicted Secondary structure 










































.......
   453......460.........470.........480.........490....
Predicted Secondary structure 
























..................
Query Sequence  WRPGTKDGVYCSYCHGSDHEKLFMPTVDNSCGACHPKQAAEF. . . . . . . . . . . . . . . . . .
Query Conservation          
 
  

   
           
  

  
  
 ..................
Alig confidence  ..........








....


















..................
Template Conservation  ..........
  

    ....       
  

                         
Template Sequence  . . . . . . . . . . CAGCHAIVT. . . . PKRDQAWCATCHNVTSSMTPEQMQQGIKGKLPPDQNE
Template Known Secondary structure  ..........T

....



S


TT

TT
S
Template Predicted Secondary structure  ..........






....


















   495....500.........510.........520....
Predicted Secondary structure  ..............................









Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IKGRDHGRPNHPQSWEGNVSTPWYAEYYRR
Query Conservation  ..............................                     
        
Alig confidence  ..............................





























Template Conservation                                        
 
  
                
Template Sequence  ALAAETVLNHKPVQPLTAMQGPYKVSIDALADKYEPSNFTHRRHMASLMERIKGDKLAEA
Template Known Secondary structure 




...GGGS
S

TT
SSB


TT
Template Predicted Secondary structure 



































   525....530.........540.. ..... ..550.........560.........570.
Predicted Secondary structure 













......




.......















Query Sequence  GEGYSMVGCDQCHQNMSS. . . . . . CDDCH. . . . . . . SRHRFSAAEARRPEACSICHMGPD
Query Conservation         

  



 
 ......
 


.......


 

  




 

  





Alig confidence 

















......




.......











.










Template Conservation          
  

           
  

                   .  
  

    
Template Sequence  FHNKPETLCATCHHRSPLSATPPKCGSCHTKEIDPANPNRPNLKAAYH. LQCMGCHQGMN
Template Known Secondary structure 

STTGGGGGTS
SS
S
SS...GGGTS
SS

SSS
S



.



TT
Template Predicted Secondary structure 



































.







   572.......580.........590.........600.........610........
Predicted Secondary structure 































Query Sequence  HPDWESYSRSKWGVIYETTKERWNWDKNLAEVIPGEDYLAPTCQYCH
Query Conservation 


 


  



 

       
       
  
 

 







Alig confidence  ..................................












Template Conservation  ..................................        
  

Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VGRPKNTDCTTCH
Template Known Secondary structure  ..................................
SSS
TT
S
Template Predicted Secondary structure  ..................................








Download:Text version FASTA version

No model constructed - rank, confidence too low


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions