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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence99.97%DateWed Nov 27 10:14:46 GMT 2024
Rank97Aligned Residues271
% Identity18%Templatec5d4hB_
PDB info PDB header: oxidoreductaseChain: B: PDB Molecule: copper-containing nitrite reductase; PDBTitle: high-resolution nitrite complex of a copper nitrite reductase2 determined by synchrotron radiation crystallography
PDB Entry: PDBe RCSB PDBj
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.... .....60.........70.........80.........90
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Query Sequence  LTGKDGAVHLEMEAKPLTIEPRP. GVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFR
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Template Sequence  AEGGPKVVEFTMVIEEKKIVIDDAGTEVHAMAFNGT. . . . . VPGPLMVVHQDDYLELTLI
Template Known Secondary structure 

SS


STT

TT
.....SS...TT
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   91... .....100.........110.........120.........130.........140........
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Query Sequence  NKLT. . VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYV
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Template Sequence  NPETNTLMHNIDFHAAT. . . . . . . GALGGGGLTEINPGEKTILRF. KATKPGVFVYHCAP
Template Known Secondary structure 
TT

S
B

TTS
.......SGGGGGGG

B
TT.

S



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   149150.........160.........170..... ....180........ .190...
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Query Sequence  FERGGEEGLSRGLWGALIVEPVGGDPN. . . . . . PPDKEFVVFMHAF. . . . NVNGQ. . . . .
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Template Sequence  PG. MVPWHVVSGMNGAIMVLPREGLHDGKGKALTYDKIYYVGEQDFYVPRDENGKYKKYE
Template Known Secondary structure  TT.
TT

TB

B
TTS
B


S


B
TTS.B.

S
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   194.....200.........210....... ..220.........230.........240....
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Query Sequence  . . . . . . EYYAFNNKSGDIELMRGDSSAFPG. . . ETWKAKMGDKVRFHLINITEEAHTFHT
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Template Conservation                         

               
      
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Template Sequence  APGDAYEDTVKVMRTLTPTHVVFNGAVGALTGDKAMTAAVGEKVLIVHSQANR. DTRPHL
Template Known Secondary structure  SGGGGTT

STTBTTTTSGGG
TT
SSS.
B
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   245....250...... ...260.........270.........280.........290.... .
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Query Sequence  HGHRWLDKSCDK. . . . . . . . LIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHM. M
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Template Sequence  IGGHGDYVWATGKFNTPPDVDQETWFIPGGAAGAAFYTFQQ. . . PGIYAYVNHNLIEAFE
Template Known Secondary structure  T

TTSBTTS..SS

B
TT

S...
SST
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   296...300.........310.........320
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Query Sequence  NGMFGIFMVEEGKRVNAVIASCDEG
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Template Conservation   
                       
Template Sequence  LGAAAHFKVTGEWNDDLMTSVLAPS
Template Known Secondary structure  SS
S


TTT


SS
S
Template Predicted Secondary structure 


















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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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