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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank119Aligned Residues267
% Identity16%Templatec1zv2A_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: copper-containing nitrite reductase; PDBTitle: cu-containing nitrite reductase
PDB Entry: PDBe RCSB PDBj
Resolution1.74 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.........80.........
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Query Sequence  RCLTGKDGAVHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILF
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Template Sequence  QVAASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGS. . . . . IPGPLMIVHEGDYVELTL
Template Known Secondary structure  SS
SSS

TTTTB.....SS..TT
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   90.... .....100.........110.........120.........130.........140.......
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Query Sequence  RNKLT. . VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSY
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Template Sequence  INPPENTMPHNIDFHAA. . . TGALGG. . . . GGLTLINPGEKVVLRF. KATRAGAFVYHCA
Template Known Secondary structure 
TT

S
B

TTS...
SGGGG....GGG

B
TT.

S


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   148.150.........160.........170..... ....180.........190.......
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Query Sequence  VFERGGEEGLSRGLWGALIVEPVGGDPN. . . . . . PPDKEFVVFMHAFNVNGQEYYA. . . .
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Template Conservation              
  
   
                                        
Template Sequence  PGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPKDEDGTYMRF
Template Known Secondary structure 
STTTT

TT

B
TTS
B


S


B
TTS.B.

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   198.200.........210....... ..220.........230.........240...
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Query Sequence  . . . . . . . . . . . FNNKSGDIELMRGDSSAFPG. . . ETWKAKMGDKVRFHLINITEEAHTFH
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Template Conservation                          

               
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Template Sequence  SDPSEGYEDMVAVMDTLIPSHIVFNGAVGALTGEGALKAKVGDNVLFVHSQPNRD. SRPH
Template Known Secondary structure  SST

STTSTTTTSGGG
TT
SSS
.B
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   244.....250..... ....260.........270.........280.........290....
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Query Sequence  THGHRWLDKSCD. . . . . . . . KLIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHM.
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Template Sequence  LIGGHGDLVWETGKFHNAPERDLETWFIRGGSAGAALYKFLQ. . . PGVYAYVNHNLIEAV
Template Known Secondary structure  T

BSTT

TTS..B
SBSB

B
TT

S...
SS


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   295....300.........310...
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Query Sequence  MNGMFGIFMVEEGKRVNAV
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Template Conservation    
                
Template Sequence  HKGATAHVLVEGEWDNDLM
Template Known Secondary structure 



S


TTT
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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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