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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence99.03%DateWed Nov 27 10:14:46 GMT 2024
Rank125Aligned Residues207
% Identity19%Templatec5ze8A_
PDB info PDB header: photosynthesisChain: A: PDB Molecule: cytochrome c552; PDBTitle: crystal structure of a penta-heme cytochrome c552 from2 thermochromatium tepidum
PDB Entry: PDBe RCSB PDBj
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   398.400.........410.........420.........430.........440.........450.......
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Query Sequence  LVKYRPDQCVECHEETTPGIVAEWKMSNHANPKKNPHVSAETQEIEALIGKELNNWRPGT
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Template Sequence  IHRVSSELCANCHE. . . . DIYRQWKGSMHAKSTALSDPIHGLFYQQEVGDPTAEGMVHKK
Template Known Secondary structure  GGG

TT
....TSTTTT
STTT
T

TT
TT


TT
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   458.460........ .470.........480.........490.........500........
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Query Sequence  . KDGVYCSYCHG. . . . . . . . SDHEKLFMPTVDNSCGACHPKQAAEFIKGRDHGRPNHPQS
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Template Sequence  SGKFPLCLYCHAPNAARDQTTKLDAHPAYTEGVNCVACHTLKTYNGIQDAEGKLRYGIKA
Template Known Secondary structure  T
SS.TTSTT


TTS
T
S
T

SB
TTS
B

GGGG
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   509510.........520.........530.........540. ........550.........560....
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Query Sequence  WEGNVSTPWYAEYYRRGEGYSMVGCDQCHQNMS. . . . SCDDCHSRHRFSAAEARRPEACS
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Template Conservation    ..                                                      
 
Template Sequence  YD. . LSDRLQAPIGFPRELERLKAKPNPHLGEPVELDGKTIPALTMEANPRQLRTSDACM
Template Known Secondary structure  ..
SSSS



SSS
TTSSS
TT..


SGGGT
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   565....570.........580.........590.........600.........610.........620....
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Query Sequence  ICHMGPDHPDWESYSRSKWGVIYETTKERWNWDKNLAEVIPGEDYLAPTCQYCHMYVGNN
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Template Sequence  GCHDQRDNPQ. . . . . . . . . GVPLCQTGKEFIAGG. . . . . . . . . . . SQVACQTCHMPVAGG
Template Known Secondary structure  S

TT.........S

T...........



S
TT
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   625....630
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Query Sequence  KWEMNV
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Template Conservation     
 
Template Sequence  FADHSM
Template Known Secondary structure 



Template Predicted Secondary structure 



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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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