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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence98.63%DateWed Nov 27 10:14:46 GMT 2024
Rank127Aligned Residues201
% Identity18%Templatec19hcA_
PDB info PDB header: electron transportChain: A: PDB Molecule: protein (nine-haem cytochrome c); PDBTitle: nine-haem cytochrome c from desulfovibrio desulfuricans atcc 27774
PDB Entry: PDBe RCSB PDBj
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   366...370.........380... ......390.........400. .......
Predicted Secondary structure 








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Query Sequence  IWGDYYSPIPLYTYFNPS. . . . . . . RHYVPPESDAYTNLLVKY. . . . . . . . . . RPDQCVE
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Template Conservation                                     
  
      
  

       
  
Template Sequence  ALEPTDSGAPSAIVMFPVGEKPNPKGAAMKPVVFNHLIHEKKIADCETCHHTGDPVSCST
Template Known Secondary structure  .....SSSS
S



SS

TT

S...


STTS

S
GGG
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   409410... ......420........ .430.........440.. .......450......
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Query Sequence  CHEET. . TPGIVAEWKMSNHAN. . . . . . . . . PKKNPHVSAETQEI. EALIGKELNNWRPG
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Template Conservation 

                 
               
  

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Template Sequence  CHTVEGKAEGDYITLDRAMHATDIAARAKGNTPTSCVSCHQSETKERRE. . . . . . . . . . .
Template Known Secondary structure  T

SS

GGGTT


S
....SSS




S...........
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   457..460.........470.........480.........490 ..
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Query Sequence  TKDGVYCSYCHGSDHEKLFMPTVDNSCGACHPKQ. . . . . . . . . . . . . . . . . . . . . . . . AA
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Template Conservation  ......
  

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Template Sequence  . . . . . . CAGCHAITT. . . . PKDDEAWCATCHDITPSMTPSEMQKGIAGTLLPGDNEALAA
Template Known Secondary structure  ......T

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SB


TT

T
S
Template Predicted Secondary structure  ......



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   493......500. ........510.........520........
Predicted Secondary structure 
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Query Sequence  EFIKGRDHG. . . . . . . . . . . . . . . . . . . . . . . . RPNHPQSWEGNVSTPWYAEYYRRGEGY
Query Conservation 
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Template Conservation                                      
  
                    
Template Sequence  ETVLAEATVAPVSPMLAPYKVVIDALADKYEPSDFTHRRHLTSLMESIKDDKLAQAFHDK
Template Known Secondary structure 

......GGGS
S

TT
SSB


TTTT
S
S
Template Predicted Secondary structure 









































   529530.........540. ...... ..550.........560.........570.....
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Query Sequence  SMVGCDQCHQNMS. . . . . . SCDDCH. . . . . . . SRHRFSAAEARRPEACSICHMGPDHPDW
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Template Conservation      
  

           
  

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Template Sequence  PEILCATCHHRSPLSLTPPKCGSCHTKEIDAADPGRPNLMAAYH. LECMGCHKGMAV. . .
Template Known Secondary structure  TTGGGGGTS
SS


SS...S
SS

TTSTTS...TT
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   576...580.........590.........600.........610.........620..
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Query Sequence  ESYSRSKWGVIYETTKERWNWDKNLAEVIPGEDYLAPTCQYCHMYVG
Query Conservation 


  



 

       
       
  
 

 








  
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Template Conservation  ...............................       
  

    
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ARPRDTDCTTCHKAAA
Template Known Secondary structure  ...............................
SS
TT
SSSSS.B.
Template Predicted Secondary structure  ...............................











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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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