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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank34Aligned Residues262
% Identity24%Templatec5ytmA_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: copper-containing nitrite reductase; PDBTitle: c135a mutant of copper-containing nitrite reductase from geobacillus2 thermodenitrificans determined by in-ouse source
PDB Entry: PDBe RCSB PDBj
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40. ........50.........60.........70.........80........
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Query Sequence  CLTGKDGAVHL. . EMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKIL
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Template Sequence  ERVGPHDVVHIEEMMTAQITDIEIDKGKIYKAWTFNGQ. . . . . APGPLVVVNEGDTIHFT
Template Known Secondary structure  TT...TTTTB.....SS


TT
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   8990.. ... ....100.........110.........120.........130.........140......
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Query Sequence  FRNK. LTV. PASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHS
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Template Conservation    
             
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Template Sequence  LKNMMDPVVPHSMDFHAVHASPSKDFI. . . . . . . . DVMPNKSGTFTYPANNKPGVFMYHA
Template Known Secondary structure 
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SS

B

TTS


S
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B
TT

.S

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   147..150.........160.........170..... ....180.........190.........200....
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Query Sequence  YVFERGGEEGLSRGLWGALIVEPVGGDPN. . PPDKEFVVFMHAFNVNGQEYYAFNNKSGD
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Template Sequence  GTKP. . VLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQQNGVPS
Template Known Secondary structure 
.SS..TT

TT

TTGGG


STT
.S

S
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   205... .210.........220.........230...... ...240.........250.
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Query Sequence  IELM. . . . . . . . . . . . RGDSSAFPGETWKAKMGDKVRFHLINIT. EEAHTFHTHGHRWLD
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Template Conservation                  

              
        
                  
Template Sequence  YVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDD
Template Known Secondary structure 

SSTT




SBSSS
TT
SS

TT

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   252..... ..260.........270.........280.........290.........300...
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Query Sequence  KSCDKL. . . . . . . . IDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHMMNGMFGIFM
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Template Conservation                        
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Template Sequence  VYLDGNPNNHHLQGMQTVMLPASGGAVVEFTVTR. . . PGTYPIVTHQFNHAQKGAVAMLK
Template Known Secondary structure  TT
TTS.S

TT


S...SSSTT
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   304.....310
Predicted Secondary structure 




Query Sequence  VEEGKRV
Query Conservation 


    
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Template Conservation         
Template Sequence  VTETGED
Template Known Secondary structure  SSS

Template Predicted Secondary structure 




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No model constructed - rank, confidence too low


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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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