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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence98.29%DateWed Nov 27 10:14:46 GMT 2024
Rank128Aligned Residues165
% Identity22%Templatec1z1nA_
PDB info PDB header: electron transportChain: A: PDB Molecule: PDBTitle: crystal structure of the sixteen heme cytochrome from desulfovibrio2 gigas
PDB Entry: PDBe RCSB PDBj
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   405.. ..410... ......420.........430. ........440.........450.........460
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Query Sequence  QCV. ECHEET. . TPGIVAEWKMSNHANPKK. NPHVSAETQEIEALIGKELNNWRPGTKDG
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Template Sequence  ACGVACHTTTGSKDGNFVTTAQSAHQLGVTTSCVGCHTTQA. . . . . . . . . . . . . . . . NAR
Template Known Secondary structure 
TTTTTS
SS

GGGTT


TT
SSS................S
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   461........470.........480.........490....
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Query Sequence  VYCSYCHGSDHEKLFMPTVDNSCGACHPKQAAEF. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KECAGCHAPMQKTAL. . . SQNSCIQCHEAGFPTSGTQTLGKEEREATAAKILAAKDEKPK
Template Known Secondary structure  TTS
SSS
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TTTGGGTB.SSS
SS

T




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   495....500.........510.........520.........530.......
Predicted Secondary structure  .................


















Query Sequence  . . . . . . . . . . . . . . . . . IKGRDHGRPNHPQSWEGNVSTPWYAEYYRRGEGYSMVGCDQCH
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Template Conservation                             
                           
  

Template Sequence  TVPLENVPEKLTLNYMKGDEWQAAEFPHRKIYQKLVEEAAKSPMANHFHGDALTMCSGCH
Template Known Secondary structure 


GGGS





SS

B
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TT

STTTGGGGTS
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   538.540. ........550 .........560.........570.........580.....
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Query Sequence  QNMS. . . . . . SCDDCHSRH. . . . . . RFSAAEARRPEACSICHMGPDHPDWESYSRSKWGV
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Template Sequence  HNAKPSLNPPKCASCHSKPFQERTANQPGLKGAFHNQCIGCHQEMQV. . . . . . . . . . . . .
Template Known Secondary structure 
SS


SS...TS
GGGS
TT


T
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Template Predicted Secondary structure 
































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   586...590.........600.........610.........620...
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Query Sequence  IYETTKERWNWDKNLAEVIPGEDYLAPTCQYCHMYVGN
Query Conservation 

       
       
  
 

 








  
 
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Template Conservation  ......................      
  

     
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . NPKATDCQGCHKPKNS
Template Known Secondary structure  ......................SS.TT
S.B.

Template Predicted Secondary structure  ......................












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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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