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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence99.57%DateWed Nov 27 10:14:46 GMT 2024
Rank30Aligned Residues375
% Identity17%Templatec4rknD_
PDB info PDB header: unknown functionChain: D: PDB Molecule: mcca; PDBTitle: wolinella succinogenes octaheme sulfite reductase mcca, form ii
PDB Entry: PDBe RCSB PDBj
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   345....350.........360.........370.........380.........390.........400....
Predicted Secondary structure 





































Query Sequence  YPEITEKNMYESFAGLEKGDGIWGDYYSPIPLYTYFNPSRHYVPPESDAYTNLLVKYRPD
Query Conservation                      
             
  
   
                  
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Template Conservation                                           . 
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Template Sequence  WIEEGRGNDFSKASKRSGGEGFSSMMYRVARNSTLQYPNKF. IGPEK. . . . . . . . . . . . .
Template Known Secondary structure 


GGGTS
GGGGT




S


SS

TT
SS


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Template Predicted Secondary structure 
























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   405....410.........420.........430..
Predicted Secondary structure 











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Query Sequence  QCVECHEETTPGIVAEWKMSNHANPKKN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation   

 

   




 

  
 

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Template Conservation  .
  

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Template Sequence  . CGECH. . . . PAQYETWSRSRHATTIRFPGEHPEVNNKLNDPVFDKDTASILPQGITPDV
Template Known Secondary structure  .
....TSS
TT

GGGTT
SSS
SSSTTS

SS.TT

GGG
Template Predicted Secondary structure  .....

































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  VYCTVGHIRTKFGFFDAWLLRGTYHVEGGLLKNGTGQIVAGGNQWQRTWALNLSPEVAKK
Template Known Secondary structure  TTTTT
BB

SS
GGGT
SS








Template Predicted Secondary structure 

























   433......440....
Predicted Secondary structure  ............................................





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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PHVSAETQEIEA. . . .
Query Conservation  ............................................            ....
Alig confidence  ............................................











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Template Conservation                                              
  

           
Template Sequence  IKKWVPDFPVTLEEYGDNGGYVRGLASYAAKYKKSMSFQASTSYCEVCHPWKFDFKNESE
Template Known Secondary structure  STT


SGGGGGGG

SSTT
SSTTT
BGGGTS


SS
Template Predicted Secondary structure 





















































   445....450.........460......... 470.........480.........490.........
Predicted Secondary structure  ...




















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Query Sequence  . . . LIGKELNNWRPGTKDGVYCSYCHGS. . DHEKLFMPTVDNSCGACHPKQAAEFIKGRD
Query Conservation  ...                
 
  

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Template Conservation                     
 

 


   
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          ..
Template Sequence  FYAALGNAKELQKHTISKGVSCEECHGAGGHLEGGSGL. LISNCERCHQRFSYSPDLM. .
Template Known Secondary structure  TT
TSS

TTTTSTTS


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ST

..
Template Predicted Secondary structure 


































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   500.........510.........520.........530..... .. ..540......
Predicted Secondary structure 
















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Query Sequence  HGRPNHPQSWEGNVSTPWYAEYYRRGEGYSMVGCDQ. CH. . . . . . . . . . . . QNMSSCDDC
Query Conservation                  
               

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Alig confidence  .....



















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Template Conservation  .....                    .......               
        
  
Template Sequence  . . . . . RNNPLNAGKPDLALSSKFKS. . . . . . . MGPGCCGSEGSQTYFTAHYEKGMRCATC
Template Known Secondary structure  .....T
GGGTT
GGGG
T.......TBT.T
TSTT

Template Predicted Secondary structure  .....















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   547..550...... ...560.........570.........580..
Predicted Secondary structure 






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Query Sequence  HSRHRFSAAE. . . . . . . . . . . . . . . . . . . . . . . . ARRPEACSICHMGPDHPDWESYSRSK
Query Conservation 



 

  
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Alig confidence 









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Template Conservation 
  
                                    
  

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Template Sequence  HDPHDVTGNVTGEKGIKGVSYNSEQGYLSSLYSKPKLKKECTDCHKE. . . . . . . . . . . . .
Template Known Secondary structure  B
SS

S
S



TT


SS

TTSGGGG
S




BS


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Template Predicted Secondary structure 










































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   583......590.........600.........610.........620.... .....
Predicted Secondary structure 






























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Query Sequence  WGVIYETTKERWNWDKNLAEVIPGEDYLAPTCQYCHMYVGNN. . . . . . . . . . . . . KWEMN
Query Conservation 

 

       
       
  
 

 








  
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Alig confidence  ................

























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Template Conservation  ................               
  

                        
Template Sequence  . . . . . . . . . . . . . . . . QAYIQSKADTHSKNSCASCHMPFMMSCCENFYAIQFQDQAGFDT
Template Known Secondary structure  ................SSSTTTTS
S


BBS.S

GGG
BGGGTBSS
Template Predicted Secondary structure  ................











































   630.........640.........650.........660.........670.........680......
Predicted Secondary structure 






































...
Query Sequence  VETKGIWRMGVIPPKEVEFKSGLKDFPYGIKIPPMDKKLEIYSAESQEKRRKWVELC. . .
Query Conservation 
  
  
                   
                 
    
  
  

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Template Conservation      
            ......                                 
   
Template Sequence  QRRAHIWKIDVDPARKS. . . . . . LVAGSTSKDPRDGKDWHFERNEEGRNFVDLMWACART
Template Known Secondary structure 
B




.B.

SS

S......

TT

STTS
TT



TTS


B


Template Predicted Secondary structure 













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   687..690..... ....700.........710.........720.....
Predicted Secondary structure  ..........


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Query Sequence  . . . . . . . . . . SKCHSSRFA. . . . . . . . . . . GMWLDSLDQYMFESWRRIDEAQLIIEKLFS
Query Conservation  ..........  


  

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Alig confidence  ..........








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Template Conservation           
  

                                              
Template Sequence  TWADKDQAEAKGCHSPVVSELKETLHFKDQKQVYNEVMGWQTPVKDKFTQVKVGIQGLYS
Template Known Secondary structure 
SS
TTTTT
TTT

S
GGG


S
Template Predicted Secondary structure 
























   726...730.........740.........750.........760.........770.........780.....
Predicted Secondary structure 
























































Query Sequence  ENAIEPPPEKRPPFPLSDLIIKVLGAEKLGAEMYRLFKQTNGHLPVIGPILGAYSIFTQN
Query Conservation   


          
  
                  
       
               
Alig confidence 





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Template Conservation        ......................................................
Template Sequence  LLEVKK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTS
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Template Predicted Secondary structure 

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   786...790.........800.........810.........820. ........830.........840....
Predicted Secondary structure 








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Query Sequence  EGNPGGIEREYAEMWFWSHLQGYKGAAHAQPDISWW. WGTAQGVGNLTRIRDEAEKLRRL
Query Conservation      
 

     

     
   

 
  



 
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Alig confidence  ......





























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Template Conservation  ......               
               
                      
Template Sequence  . . . . . . LAPSDKTRVYELIEKAQDTVDLIEKDGSWGMHGFKYTKQRLDAAVEYINEAQRI
Template Known Secondary structure  ......


STTTT
Template Predicted Secondary structure  ......












   845...
Predicted Secondary structure 


Query Sequence  KSGS
Query Conservation    
 
Alig confidence 



Template Conservation      
Template Sequence  MKKS
Template Known Secondary structure  TT
Template Predicted Secondary structure 


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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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