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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank105Aligned Residues264
% Identity18%Templatec8s5xA_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: copper-containing nitrite reductase; PDBTitle: high ph (8.0) as-isolated msox movie series dataset 10 of the copper2 nitrite reductase (nirk) from bradyrhizobium japonicum usda110 [3.53 mgy]
PDB Entry: PDBe RCSB PDBj
Resolution1.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.... .....60.........70.........80.........90.
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Query Sequence  TGKDGAVHLEMEAKPLTIEPRP. GVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRN
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Template Sequence  KQGPKIVEFKLTIEEKKVVIDEKGTTFQAMTFNGS. . . . . MPGPLMVVHEGDYVETTLVN
Template Known Secondary structure 





STT

TTB.....SS..TT
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   92.. .....100.........110.........120.........130.........140.........
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Query Sequence  KLT. . VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVF
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Template Sequence  PATNTMPHNIDFHSAT. . . . . . . GALGGGALTLINPGEQVVLRW. KATKTGVFVYHCAPG
Template Known Secondary structure 
TT

S
B

TTS
.......SGGGGGGG

B
TT.

S



S
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   150.........160.........170..... ....180.........190.......
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Query Sequence  ERGGEEGLSRGLWGALIVEPVGGDPN. . . . . . PPDKEFVVFMHAFNVNGQEYYA. . . . . .
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Template Sequence  GPMIPWHVVSGMNGAVMVLPRDGLNDGKGHALKYDKVYYVGEQDMYVPRDEKGNFKSYDS
Template Known Secondary structure  TTTT

TT

SSS


S


B
TTS.B.

SS
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   198.200.........210....... ..220.........230.........240.....
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Query Sequence  . . . . . . . . . FNNKSGDIELMRGDSSAFPG. . . ETWKAKMGDKVRFHLINITEEAHTFHTH
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Template Sequence  PGEAFTDTEEMMKKLIPSHVVFNGKVGALTGKNALTANVGENV. LIVHSQANRDSRPHLI
Template Known Secondary structure  TT

STTSTTTTSGGG
TT
.SSS
B
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   246...250....... . .260.........270.........280.........290.... ..
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Query Sequence  GHRWLDKSCDKL. . . . . . I. . DTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHM. MN
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Template Sequence  GGHGDYVWETGKFGNAPEVGLETWFIRGGSAGAAMYKFMQ. . . PGIYAYVTHNLIEAADL
Template Known Secondary structure  T

TT

TTS..SB

B
TT

S...
S





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   297..300.........310...
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Query Sequence  GMFGIFMVEEGKRVNAV
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Template Conservation 
                
Template Sequence  GATAHFKVEGKWNDDLM
Template Known Secondary structure  S
S


TTT
Template Predicted Secondary structure 










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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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