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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank39Aligned Residues261
% Identity23%Templatec3sqrA_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: laccase; PDBTitle: crystal structure of laccase from botrytis aclada at 1.67 a resolution
PDB Entry: PDBe RCSB PDBj
Resolution1.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.
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Query Sequence  LTGKDGAVHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRN
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Template Sequence  VTPTGVTREYWLSVENSTIT. PDGYTRSAMTFNGT. . . . . VPGPAIIADWGDNLIIHVTN
Template Known Secondary structure 






.SSSB
TTB.....SS


TT.
Template Predicted Secondary structure 






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   92.... ...100.........110.........120.........130.........140.........150
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Query Sequence  KLTVP. ASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFE
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Template Sequence  NLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQV. TQYGTTWYHSHF. .
Template Known Secondary structure 

SS

B
TT


TT
GGGS

BTTTB..B.TT

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S..
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   151........160.........170.........180.........190... ......200.......
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Query Sequence  RGGEEGLSRGLWGALIVEPVGGDPNPPDKEFVVFMHAFNVNGQ. . . EYYAFNNKSGDIEL
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Template Sequence  . . . SLQYGDGLFGPLIINGPATADYDED. VGVIFLQDWAHESVFEIWDTARLGAPPALEN
Template Known Secondary structure  ...TTGGGGT



SS

S.
SS
TTS
...BS
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   208.210...... ...220.........230.....
Predicted Secondary structure 





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Query Sequence  MRGDSSAFP. . . . . . . . . . . . . . . GETWKAKMGDKVRFHLINI. . . . . . . . . . . . . . . . .
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Template Conservation     

                           
   
 
  
                  
Template Sequence  TLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTV
Template Known Secondary structure  TTB




TT


TTB








TT


SS

TT

Template Predicted Secondary structure 
































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation 
  

    
       
  
 
 
  
                                
Template Sequence  IANDLVPIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGIL
Template Known Secondary structure  TTSS
TT


S.SS



TTTS
BTTGGG
Template Predicted Secondary structure 


























  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  RYDSSSIANPTSVGTTPRGTCEDEPVASLVPHLALDVGGYSLVDEQVSSAFTNYFTWTIN
Template Known Secondary structure  SSTT

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S

S
GGG

BSS

B

SSSST
Template Predicted Secondary structure 













































   236...240........
Predicted Secondary structure  ...............................................








Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TEEAHTFHTHGHR
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Template Conservation                                                     

 



  
Template Sequence  SSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQEEWVVYVIEDLTGFGIWHPIHLHGHD
Template Known Secondary structure  TB




TTS
TT




GGG

SSS
SSS


SS

Template Predicted Secondary structure 








































   249250...... ...260.........270.........280.........290
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Query Sequence  WLDKSCDK. . . . . . . . . . . . . . . . . . LIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQS
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Template Conservation 
 
                         

   
      
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Template Sequence  FFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDN. . . PGSWLLHCHI
Template Known Secondary structure  SS


TTTSGGG


BS

S
TTSS
S...

S
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   291........300........
Predicted Secondary structure 





Query Sequence  QEHMMNGMFGIFMVEEGK
Query Conservation    
   



 
 


  
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Template Conservation    
   

          
Template Sequence  AWHASEGLAMQFVESQSS
Template Known Secondary structure  TT
SGGG
Template Predicted Secondary structure 



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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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