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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence95.69%DateWed Nov 27 10:14:46 GMT 2024
Rank183Aligned Residues68
% Identity25%Templatec6hr0A_
PDB info PDB header: electron transportChain: A: PDB Molecule: cytochrome c; PDBTitle: optimizing electroactive organisms: the effect of orthologous proteins
PDB Entry: PDBe RCSB PDBj
Resolution1.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   460.... ..... 470.........480.... .....490.........500.........510....
Predicted Secondary structure 


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Query Sequence  GVYCS. YCHGS. . . DHEKLFMPTVDNSCG. ACHPKQAAEFIKGRDHGRPNHPQSWEGNVS
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Template Sequence  GG. CEESCHADDGGSSPSADGAYEFEQCQSSCHGSLAEMDA. . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
.GG.GTSGG..GS.

SSS.

GGGS
T...................
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   515....520.........530.........540.........550.........560.... ...
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Query Sequence  TPWYAEYYRRGEGYSMVGCDQCHQNMSSCDDCHSRHRFSAAEARRPEACS. ICH
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Template Sequence  . . . . . . . . . . . . . VVHKP. . . . HDGALMCADCHAPHDMNV. . . GQKPTCDSSCH
Template Known Secondary structure  .............T.TGG....GTTT

S
TTTSBT...T...
GGG.T
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No model constructed - rank, confidence too low


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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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