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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank41Aligned Residues256
% Identity23%Templatec3kw7A_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: laccase b; PDBTitle: crystal structure of lacb from trametes sp. ah28-2
PDB Entry: PDBe RCSB PDBj
Resolution3.44 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90....
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Query Sequence  VHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRNKLT. . . .
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Template Conservation                 .            ..... 


 
    
    
   
 
     
Template Sequence  PVTDLTISNADVTPD. GFTRAAVVANGV. . . . . FPGPLITGNKGDNFQINVIDNLTNATM
Template Known Secondary structure  S
SS.S

SSS.....SS
..TT



GGG
Template Predicted Secondary structure 



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   95....100.........110.........120.........130.........140.........150...
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Query Sequence  . VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFERGG
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Template Conservation        
 

         

        
 

    
        
   

 
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Template Sequence  LKTTTIHWHGLFQHGTNWADGPAFVNQCPIASGNSFLYDFTVPDQAGTFWYHSHL. . . . .
Template Known Secondary structure 
S
B
T


TT
GGGG

BTTTB..B.TT


S


S.....
Template Predicted Secondary structure 



































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   154.....160.........170....... ..180.........190.........200.........
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Query Sequence  EEGLSRGLWGALIVEPVGGDPNPP. . . . DKEFVVFMHAFNVNGQEYYAFNNKSGDIELMR
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Template Conservation        

 
  

                   
                         
Template Sequence  STQYCDGLRGPLVVYDPSDPYASMYDVDDDTTVITLSDWYHTAAKLGPAFPPNADSVLIN
Template Known Secondary structure  TTGGGGT

TT
TTTTT
SB
SGGG
SS
TTTS
SS
SS
ST
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   210....... ..220.........230...
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Query Sequence  GDSSAFPG. . . . . ETWKAKMGDKVRFHLI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation 
                   
     
  
                     

       
Template Sequence  GLGRFAGGNASDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVDGVNHEPLE
Template Known Secondary structure  TB


TT






TT


SS..TT

TT
Template Predicted Secondary structure 






























  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation       
  
 
                                                 
Template Sequence  VDSIQIFASQRYSFVLNATQSVDNYWIRAIPNTGTIDTTGGLNSAILRYSGADIVDPTAN
Template Known Secondary structure  S
TT


S
S
SSS



TTSTTTTS
SS




Template Predicted Secondary structure 

































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                 
            
Template Sequence  ATTSVIPLVETDLVPLDSPAAPGDPVVGGVDLAMNLDFSFNGTNFFINNETLIPPTVPVL
Template Known Secondary structure 
...SS


GGG

BSSS
S.SS
SSTT
SS


SS
TTB




SS
Template Predicted Secondary structure 











































   234.....240.........250..
Predicted Secondary structure  .........................................











Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NITEEAHTFHTHGHRWLDK
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Template Conservation                                                 

 
 
   
 
 
Template Sequence  LQILSGAQSASDLLPTGSVYTLPLNSTIELSFPITTVNGVTNAPGAPHPFHLHGHAFSVV
Template Known Secondary structure  TT

SGGGSSSTTT
TT


B

TTTT
SS
S


TT

Template Predicted Secondary structure 


































   253 ......260... ......270.........280.........290.........300.
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Query Sequence  S. . . . . . . . . . CDKLIDTIGL. NPFDSYVLDFVAGEGVGKGNWAFHCQSQEHMMNGMFGI
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Template Conservation                  

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Template Sequence  RSAGSSDYNYVNPVRRDTVSTGNPGDNVTIRFTTDN. . . AGPWFLHCHIDFHLEAGFAIV
Template Known Secondary structure 
TT





SS

S

STTB




...
S
TTT
Template Predicted Secondary structure 























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   302......
Predicted Secondary structure 


Query Sequence  FMVEEGK
Query Conservation 
 


  
Alig confidence 






Template Conservation         
Template Sequence  FAEDTPD
Template Known Secondary structure  T
Template Predicted Secondary structure 

Download:Text version FASTA version

No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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