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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence94.66%DateWed Nov 27 10:14:46 GMT 2024
Rank180Aligned Residues125
% Identity14%Templatec8q1bV_
PDB info PDB header: membrane proteinChain: V: PDB Molecule: PDBTitle: iii2-iv1 respiratory supercomplex from s. pombe
PDB Entry: PDBe RCSB PDBj
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60......
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Query Sequence  ALVPVVLAFLFLFLCFQCLYADIRCLTGKDGAVHLEMEAKPLTIEPRPGVFFDAWGYCLK
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Template Sequence  TLIPALILILVALPSFKLLYLLD. . . EVQKPSMTVKAIGRQW. . . . . . . . . . . FWTYEL.
Template Known Secondary structure  T...S




B

B



SS...........S.
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   67..70..... ....80.........90....
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Query Sequence  GDVPTVPGP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VIKVREGTKVKILFRNKLT
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Template Sequence  . . . . . . NDFVTNENEPVSFDSYMVPEEDLEEGSLRQLEVDNRLVLPIDTRIRLILTSGD.
Template Known Secondary structure  ......
TT

TT



B..STT

TT..TTS
BSS
TT

B


BSS.
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   95....100.........110.........120.........130.........140.........150....
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Query Sequence  VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFERGGE
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Template Sequence  . . . VIHSWAVP. . . . . . . . . . SLGIKCDCIPGRLNQVSL. SIDREGLFYGQCSELCG. . .
Template Known Secondary structure  ...S
T..........TTT
BTS


B.


S



S

S...
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   155....160.........170.
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Query Sequence  EGLSRGLWGALIVEPVG
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Template Sequence  . VLHSSMPIVVQGVSLE
Template Known Secondary structure  .TTTTS

Template Predicted Secondary structure  .





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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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