Return to main results Retrieve Phyre Job Id

Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence99.96%DateWed Nov 27 10:14:46 GMT 2024
Rank40Aligned Residues257
% Identity23%Templatec4knuD_
PDB info PDB header: oxidoreductaseChain: D: PDB Molecule: multicopper oxidase type 1; PDBTitle: copper nitrite reductase from nitrosomonas europaea at ph 6.5
PDB Entry: PDBe RCSB PDBj
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.... .....60.........70.........80.........90.....
Predicted Secondary structure 




.





















Query Sequence  GAVHLEMEAKPLTIEPRP. GVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRNKLTV
Query Conservation       
  
     
  
.

    

 



   








 




 
 
 
 
 
Alig confidence 

















.











.....























Template Conservation                                 .....     
    
        
    
Template Sequence  KTVQVTLHAVETDVAYDNKGSTYRAWTFDGK. . . . . VPGPVVRVTEGDTVEFTLINDKNS
Template Known Secondary structure 

STT

TTB.....SS


TT

TT
Template Predicted Secondary structure 








.....










   96...100.........110.........120.........130.........140.........150...
Predicted Secondary structure  ..









































Query Sequence  . . PASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFERGG
Query Conservation  ..








  
   


   
 

  
 






 
 

  









     
Alig confidence  ..

















........











.















..
Template Conservation           
          ........            .     
          .. 
Template Sequence  KNSHSMDFHAARLDVVEDFE. . . . . . . . SIKPGETKKYTF. TADNPGVFFYHCGSDP. . M
Template Known Secondary structure  SS
B

TT



TTTTT
........
B
TT
.

S


.SS..
Template Predicted Secondary structure 














........





.









..
   154.....160.........170..... ....180.........190.........200.... .....210.
Predicted Secondary structure 









.



















.
Query Sequence  EEGLSRGLWGALIVEPVGGDPN. PPDKEFVVFMHAFNVNGQEYYAFNNKSGD. IELMRGD
Query Conservation   


  

 
 




      .  


 



 
 
  

     
    
.    


Alig confidence 





















.




























.






Template Conservation        
  
   
                                           

 
Template Sequence  IQHIARGMYGVIIVDPKDANALPKADREYVLIQAEHYENPDDKTAMMQNKWSSNVVFNGG
Template Known Secondary structure  TT

SSTTSS...S.SSTT
TT

S.TTB
Template Predicted Secondary structure 





























   212....... 220.........230...... ...240.........250......
Predicted Secondary structure 






.......





.












.......
Query Sequence  SSAFPGET. . . . . . . WKAKMGDKVRFHLINIT. EEAHTFHTHGHRWLDKSCDK. . . . . . .
Query Conservation 
   
  
.......
 
  

 






 
.   







 
 

    .......
Alig confidence 







.......
















.



















.......
Template Conservation                      
        
                     
        
Template Sequence  VFKYDPVHDSEATSWLQAKPGERVRIYFVNAGPNELSSLHPIAGIWDRVYPSGNPKNVQY
Template Known Secondary structure  TTTT
TTT
TT




TT

SS

T

TT
GGG
Template Predicted Secondary structure 



































   257..260.........270.........280.........290.........300.........310..
Predicted Secondary structure 
























Query Sequence  LIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHMMNGMFGIFMVEEGKRVNA
Query Conservation   



 
 



 

 
 


   

 






  
   



 
 


      
Alig confidence 




















...































Template Conservation           
           ... 
                              
Template Sequence  ALQSYLIGAGDAATLDLISPV. . . EGANAIVDHSMRHAHSGAIAVIMFTNDADPEA
Template Known Secondary structure  S

TT

SS...SSSTTT

TT

TTT
Template Predicted Secondary structure 









...


















Download:Text version FASTA version

No model constructed - rank, confidence too low


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions