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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank65Aligned Residues251
% Identity22%Templatec5zl1A_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: putative copper-type nitrite reductase; PDBTitle: hexameric structure of copper-containing nitrite reductase of an2 anammox organism ksu-1
PDB Entry: PDBe RCSB PDBj
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.... .....70.........80.
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Query Sequence  CLTGKDGAVHLEMEAKPLTIEPRPGVFFDAWGYC. . . . . . . . . LKGDVPTVPGPVIKVRE
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Template Sequence  ISRSCPKTVTVNLVAKEVVADLAPGKKFWFWTFAEKKGDTVGPAT. . . . . VPGPMVRVME
Template Known Secondary structure 



S

TTBTTB


.....BS
..T
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   82.......90.... .....100.........110.........120.........130.........
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Query Sequence  GTKVKILFRNKLT. . VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTP
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Template Conservation 
        
             
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Template Sequence  GDTVVINLTNDLHNEEPHNLDFHA. . . . . . . GFG. . . . AMLMDIEPGETDTLTF. KAKRE
Template Known Secondary structure  T

TT

S
B

TT.......STT....
B

.B.TT
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S
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   140.........150.... .....160.........170.........180.........190..
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Query Sequence  GTWFYHSYVFERGGE. . EGLSRGLWGALIVEPVGGDPNPPDKEFVVFMHAFNVNG. . . . .
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Template Sequence  GAYIYHCGA. . . EGMPWEHVAYGMYGLIVVEPKGGLS. RVDKEFYIGQGEWYIKPGIEDH
Template Known Secondary structure 

G...GG
TT

TT
S...
S
S
SS
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   193......200.........210........ .220.........230...... ...
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Query Sequence  . . . . . QEYYAFNNKSGDIELMRGDSSAFPGE. . . . . . . TWKAKMGDKVRFHLINIT. EEA
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Template Conservation                         

                   
        
      
Template Sequence  PHIRGYSLDEDKALAEHPDYFTFNGHTQALMDPSIYGNAITVNQGDKVRLFFVAGGPNIG
Template Known Secondary structure  TTS


TT

STTBSSTTTBTTTBTT
S
TT
SS

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   240.........250...... ...260.........270.........280.........290...
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Query Sequence  HTFHTHGHRWLDKSCDK. . . . . . LIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEH
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Template Conservation                               
  
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Template Sequence  SNFHIIGQIFDKFYPGHRRDFIRNEETAYIPPGSAAVFEFKALA. . . TGDFLIVDHALFR
Template Known Secondary structure  TT

BSSS
SSS
BSSBSS
SS

S...
SSGGG
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   294.....300.....
Predicted Secondary structure 


Query Sequence  MMNGMFGIFMVE
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Template Conservation     
        
Template Sequence  VPKGAGGLLHVK
Template Known Secondary structure  TTTT

Template Predicted Secondary structure 




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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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