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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank33Aligned Residues242
% Identity26%Templatec4f7kA_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: laccase; PDBTitle: crystal structure of lac15 from a marine microbial metagenome
PDB Entry: PDBe RCSB PDBj
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.... .. ...60.........70.........80..... ....90.....
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Query Sequence  VHLEMEAKPLTIEPRP. GV. FFDAWGYCLKGDVPTVPGPVIKVREGTKV. KILFRNKLTV
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Template Sequence  APVELVAQPVNAQILPEGEPATPMLGFNGG. . . . . TPGPVLRARQGEVFDDIRFQNQIGE
Template Known Secondary structure 
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S.TTS..TTB.....SS


TT..
SSS
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   96...100.........110.........120.........130.........140.........150.....
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Query Sequence  PASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFERGGEE
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Template Sequence  GSAVHWHGLRIDNAMDGV. . PGMTQDVVEAGGEFEYSFRAPD. AGTFWYHSHN. . . RSWE
Template Known Secondary structure 
B
T



GGGS

..BTTTB

B
TT


S.
TT...TTT
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   156...160.........170.........180.........190.........200.........210.....
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Query Sequence  GLSRGLWGALIVEPVGGDPNPPDKEFVVFMHAFNVNGQEYYAFNNKSGDIELMRGDSSAF
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Template Sequence  QVAKGLYGPLIVEEPTPP. . DVDHDLIIMIDDWRITENGVLAHQGRLGNFARALVE. . . .
Template Known Secondary structure  GGGGG

SS

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S
B
TTS
B
SSS



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   216...220.........230........
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Query Sequence  PGETWKAKMGDKVRFHLINITEE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . PVTPVRRGDRVRLRLINVATDRRIFPVELEGVEGKVVALDGMPIVDPQEFSGLILAPA
Template Known Secondary structure  ..S


T


SS
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STT

TT

TT
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation   
                                                          
Template Sequence  QRADIIADVITDAPIGFVFPTRRDGPYLLGEIPVKGANTTRQPSEIPALPPNEVTSPDMG
Template Known Secondary structure 

SSS.

T.T




S...


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   239240.........250...... ...260
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AHTFHTHGHRWLDKSCDK. . . . LIDT
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Template Conservation                                     
  



                

Template Sequence  SAVSLTLTGLTDTPLHSFERGQTARIRLVNDTRFPHGIHLHGHHFFEVGADGNLGALRDT
Template Known Secondary structure  SSSS
SS
S..TT

SSS
TT


TTSSS
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   261........270.........280.........290.........300....
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Query Sequence  IGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHMMNGMFGIFMV
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Template Sequence  TLVDAGETRDIVCVFDN. . . PGNWLLHCHMLGHQAA. . KTWVEV
Template Known Secondary structure 
TT

S...
STTS


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No model constructed - rank, confidence too low


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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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