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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank71Aligned Residues256
% Identity21%Templatec3pxlA_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: laccase; PDBTitle: type-2 cu-depleted fungus laccase from trametes hirsuta
PDB Entry: PDBe RCSB PDBj
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90....
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Query Sequence  VHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRNKLT. . . .
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Template Conservation                 .            .....  

      
    
   
       
Template Sequence  PVADLTITDAAVSPD. GFSRQAVVVNGV. . . . . TPGPLVAGNIGDRFQLNVIDNLTNHTM
Template Known Secondary structure  S
TT.S

TTB.....SS...TT.



GGG
Template Predicted Secondary structure 



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   95....100.........110.........120.........130.........140.........150...
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Query Sequence  . VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFERGG
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Template Conservation        
 

         
            
    
        
   
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Template Sequence  LKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHL. . . . .
Template Known Secondary structure 
S
B
T


TT
GGGS

BTTTB..B.TT

SS


S.....
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   154.....160.........170....... ..180.........190.........200.........
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Query Sequence  EEGLSRGLWGALIVEPVGGDPNPP. . . . DKEFVVFMHAFNVNGQEYYAFNNKSGDIELMR
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Template Conservation        
  
  

                                            

Template Sequence  STQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKLGPRFPGGADATLIN
Template Known Secondary structure  TTGGGGT

TT
TTGGG
SB
SGGG
SS
TTTS
SS
SS
ST
Template Predicted Secondary structure 





































   210........ .220.........230.....
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Query Sequence  GDSSAFPGE. . . . . TWKAKMGDKVRFHLINI. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation 
                   
   
 
  
                     

    
  
Template Sequence  GKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLE
Template Known Secondary structure  TB


TT
TT....
TT


SS

TTB
TT
Template Predicted Secondary structure 





























  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation          
 
    
                                            
Template Sequence  VDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTN
Template Known Secondary structure  SB
TT


S
SSSSSS
S
GGGTTTTS
SS




Template Predicted Secondary structure 


































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                

            
Template Sequence  QTTSVKPLNEVDLHPLVSTPVPGAPSSGGVDKAINMAFNFNGSNFFINGASFVPPTVPVL
Template Known Secondary structure 



SSB

GGG

BSS

..SS
SSTT
SS


SS
TTB




SS
Template Predicted Secondary structure 










































   236...240.........250..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TEEAHTFHTHGHRWLDK. . . . .
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Template Conservation                                            

 



  
 
      
Template Sequence  LQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAGS
Template Known Secondary structure  TT

STTTSSSTTS
TT


TTS
S.S.TT


TT
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   253......260..... ....270.........280.........290.........300....
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Query Sequence  . . . . . SCDKLIDTIGLNP. . . FDSYVLDFVAGEGVGKGNWAFHCQSQEHMMNGMFGIFMV
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Template Conservation             

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Template Sequence  TVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNN. . . PGPWFLHCHIDFHLEGGFAVVMAE
Template Known Secondary structure 



SSS

S


GGGT


S...
SSTT
Template Predicted Secondary structure 























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   305...
Predicted Secondary structure 


Query Sequence  EEGK
Query Conservation 

  
Alig confidence 



Template Conservation      
Template Sequence  DTPD
Template Known Secondary structure  SGGG
Template Predicted Secondary structure 



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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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