Return to main results Retrieve Phyre Job Id

Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank48Aligned Residues260
% Identity22%Templatec2dv6A_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: nitrite reductase; PDBTitle: crystal structure of nitrite reductase from hyphomicrobium2 denitrificans
PDB Entry: PDBe RCSB PDBj
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90...
Predicted Secondary structure 



























Query Sequence  GKDGAVHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRNKL
Query Conservation          
  
     
  


    

 



   








 




 
 
 
 
Alig confidence 
































.....





















Template Conservation                                
  .....          
        
  
Template Sequence  RQAKTVRIDLETVEVKGQLDDNTTYTYWTFNGK. . . . . VPGPFLRVRVGDTVELHLKNHK
Template Known Secondary structure  ...
TTTTB.....BS
..TT

T
Template Predicted Secondary structure 









.....








   94.....100.........110.........120.........130.........140.........150...
Predicted Secondary structure 











































Query Sequence  TVPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFERGG
Query Conservation   









  
   


   
 

  
 






 
 

  









     
Alig confidence 
...






















..










.














..

Template Conservation   ...                       ..   
       .     
         ..  
Template Sequence  D. . . SLMVHSVDFHGATGPGGAAAFTQ. . TDPGEETVVTF. KALIPGIYVYHCATP. . SV
Template Known Secondary structure  T...
SS
B

TT

SGGGGGGG

..B
TT
.

S


SS..S
Template Predicted Secondary structure 
...
















..




.







..
   154.....160.........170.........180.........190.. .......200......
Predicted Secondary structure 

















.......











Query Sequence  EEGLSRGLWGALIVEPVGGDPNPPDKEFVVFMHAFNVNG. . . . . . . QEYYAFNNKSGDIE
Query Conservation   


  

 
 




        


 



 
 
  
.......
     
    
  
Alig confidence 




















.
















.......













Template Conservation        
  
   
       .                                      
Template Sequence  PTHITNGMYGLLLVEPEGGLP. QVDREFYVMQGEIYTVKSFGTSGEQEMDYEKLINEKPE
Template Known Secondary structure  TT

TT
S...
S
BSS
TT



B
TT

S
Template Predicted Secondary structure 








.






















   207..210..... ....220.........230...... ...240.........250.....
Predicted Secondary structure 




...








.











.......
Query Sequence  LMRGDSSAF. . . PGETWKAKMGDKVRFHLINIT. EEAHTFHTHGHRWLDKSCD. . . . . . .
Query Conservation    



   ...
  

 
  

 






 
.   







 
 

   .......
Alig confidence 








...




















.


















.......
Template Conservation      
                         
                             
Template Sequence  YFLFNGSVGSLTRSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSPP
Template Known Secondary structure  TTSTT







TT
SS..T


GGG
SSS..
Template Predicted Secondary structure 

































   256...260.........270.........280.........290.........300.........310
Predicted Secondary structure  .
























Query Sequence  . KLIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHMMNGMFGIFMVEEGKRV
Query Conservation  .  



 
 



 

 
 


   

 






  
   



 
 


    
Alig confidence  .





















...





























Template Conservation             
           ... 
              
             
Template Sequence  LIGVQTVSVPPGGATIVDFKIDR. . . AGRYILVDHALSRLEHGLVGFLNVDGPKND
Template Known Secondary structure  S
TT

S...
SSGGGGGGT


S
S

Template Predicted Secondary structure 











...

















Download:Text version FASTA version

No model constructed - rank, confidence too low


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions