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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank96Aligned Residues263
% Identity19%Templatec5of5A_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: copper-containing nitrite reductase; PDBTitle: cu nitrite reductase serial data at varying temperatures
PDB Entry: PDBe RCSB PDBj
Resolution1.08 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.... .....60.........70.........80.........90.
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Query Sequence  TGKDGAVHLEMEAKPLTIEPRP. GVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRN
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Template Sequence  KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGS. . . . . VPGPLMVVHENDYVELRLIN
Template Known Secondary structure  SSSS

STT

TTB.....SS..TT
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   92.. .....100.........110.........120.........130.........140.........
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Query Sequence  KLT. . VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVF
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Template Sequence  PDTNTLLHNIDFHAA. . . TGALGG. . . . GALTQVNPGEETTLRF. KATKPGVFVYHCAPE
Template Known Secondary structure 
TT

S
B

TTS...
SGGGG....GGG

B
TT.

S



T
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   150.........160.........170. ........180........ .190...
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Query Sequence  ERGGEEGLSRGLWGALIVEPVG. . . . . . GDPNPPDKEFVVFMHAF. . . . NVNGQ. . . . . .
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Template Conservation   .        
  
   
                                          
Template Sequence  G. MVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVPKDEAGNYKKYET
Template Known Secondary structure  T.
TTT

TB

TTS


S


B
TTS.B.

SS
Template Predicted Secondary structure 
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   194.....200.........210........ .220.........230.........240.....
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Query Sequence  . . . . . EYYAFNNKSGDIELMRGDSSAFPGE. . . TWKAKMGDKVRFHLINITEEAHTFHTH
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Template Conservation                        

               
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Template Sequence  PGEAYEDAVKAMRTLTPTHIVFNGAVGALTGDHALTAAVGERV. LVVHSQANRDTRPHLI
Template Known Secondary structure  TT

STTSTTTTSGGG
TT
.SSS
B
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   246...250...... ...260.........270.........280.........290.... ..
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Query Sequence  GHRWLDKSCDK. . . . . . . . LIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHM. MN
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Template Conservation 
                           
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Template Sequence  GGHGDYVWATGKFRNPPDLDQETWLIPGGTAGAAFYTFRQ. . . PGVYAYVNHNLIEAFEL
Template Known Secondary structure  T

TT

TTS..S


B
TT

S...
SSTT
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   297..300.........310...
Predicted Secondary structure 







Query Sequence  GMFGIFMVEEGKRVNAV
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Template Conservation 
                
Template Sequence  GAAGHFKVTGEWNDDLM
Template Known Secondary structure  S
S


TTT
Template Predicted Secondary structure 








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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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