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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence98.51%DateWed Nov 27 10:14:46 GMT 2024
Rank129Aligned Residues249
% Identity14%Templatec2e84A_
PDB info PDB header: electron transportChain: A: PDB Molecule: high-molecular-weight cytochrome c; PDBTitle: crystal structure of high-molecular weight cytochrome c from2 desulfovibrio vulgaris (miyazaki f) in the presence of zinc ion
PDB Entry: PDBe RCSB PDBj
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   372.......380.........390.........400.. .......410..... ...
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Query Sequence  SPIPLYTYFNPSRHYVPPESDAYTNLLVKYR. . . . . . . . . PDQCVECHEETTP. . . . GIV
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Template Conservation                                             
  

            
Template Sequence  EQRADLVEIGVMAKFGNLELPKVTFPHDRHSEAVAKVAAPGKECATCHKNDDKGKMSLKF
Template Known Secondary structure 
S

GGGGGS

SS..

STTTTTTT

B
SS

B
SSS
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   419420.........430.........440.........450.........460.........470........
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Query Sequence  AEWKMSNHANPKKNPHVSAETQEIEALIGKELNNWRPGTKDGVYCSYCHGSDHEKLFMPT
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Template Conservation             ..........................       
  

           
Template Sequence  MRLEDTTAADL. . . . . . . . . . . . . . . . . . . . . . . . . . KNIYHANCIGCHTEQAKAGKKTG
Template Known Secondary structure  S
SS


..........................TT



Template Predicted Secondary structure 






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   479 480.........490.........500.........510.........520.........530.......
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Query Sequence  V. DNSCGACHPKQAAEFIKGRDHGRPNHPQSWEGNVSTPWYAEYYRRGEGYSMVGCDQCH
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Template Conservation       
  

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Template Sequence  PQDGECRSCHNPKP. . MASSW. . . . . . KQIGLDKSLHFRHVAAKAIAPVNDPQKNCGACH
Template Known Secondary structure 

TT
S
SS
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S
TTS


SSSS

GGGT
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   538 .540.........550.. .......560.........570.........580
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Query Sequence  Q. . . . . . . . . . . . . . NMSSCDDCHSRHRF. . . SAAEARRPEACSICHMGPDHPDWESYSR
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Template Conservation                     
  

                  
  

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Template Sequence  HVYDEAAKKLSWVKNKEDSCRACHGDARVEKKPSLREAAHTQCITCHRSVAAAP. . . . . .
Template Known Secondary structure 
TTTT

TT





SS

SSS

ST......
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   581........590.........600.........610.........620.........630.........640
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Query Sequence  SKWGVIYETTKERWNWDKNLAEVIPGEDYLAPTCQYCHMYVGNNKWEMNVETKGIWRMGV
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Template Conservation  ........................         
  

                      
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . AKADSGPVSCAGCHDPAMQAKFKVVRDVPRLERGQP
Template Known Secondary structure  ........................T






S
TTS


TT




SS

Template Predicted Secondary structure  ........................
































   641........650.........660.........670.........680.........690..
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Query Sequence  IPPKEVEFKSGLKDFPYGIKIPPMDKKLEIYSAESQEKRRKWVELCSKCHSS
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Template Conservation                              ........         
  

  
Template Sequence  DAAMVLPVVGPGAKKGMKGAMKPVAFNH. . . . . . . . KVHEAASNTCRACHHV
Template Known Secondary structure  S

...SS

SS


SS

........T
S
STTTS
S
Template Predicted Secondary structure 























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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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