Return to main results Retrieve Phyre Job Id

Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank73Aligned Residues282
% Identity19%Templatec5nq8A_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: laccase; PDBTitle: crystal structure of laccases from pycnoporus sanguineus, izoform ii
PDB Entry: PDBe RCSB PDBj
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90....
Predicted Secondary structure 
























....
Query Sequence  VHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRNKLT. . . .
Query Conservation     
  
     
  


    

 



   








 




 
 
 
 
 ....
Alig confidence 














.











.....






















....
Template Conservation                 .            ..... 


 
    
    
   
 
     
Template Sequence  PVADLTLTNAAVSPD. GFSREAVVVNGV. . . . . TPAPLISGQKGDRFQLNVIDNLTNHTM
Template Known Secondary structure  S
TT.S

TTB.....SS...TT.



GGG
Template Predicted Secondary structure 



.



.....













   95.... 100.........110.........120.........130.........140.........150..
Predicted Secondary structure  .

.







































Query Sequence  . VPASI. HPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFERG
Query Conservation  .




.




  
   


   
 

  
 






 
 

  









    
Alig confidence  .




.















































....
Template Conservation         
 

                   
 

    
        
   

 
.... 
Template Sequence  LKTTSIIHWHGFFQHGTNWADGPAFVNQCPIASGHSFLYDFQVPDQAGTFWYHSH. . . . L
Template Known Secondary structure 
S
B
.T


TT
GGGS

BTTTB..B.TT
SS


....S
Template Predicted Secondary structure 




































....
   153......160.........170....... ..180.........190.........200........
Predicted Secondary structure 












....

















Query Sequence  GEEGLSRGLWGALIVEPVGGDPNPP. . . . DKEFVVFMHAFNVNGQEYYAFNNKSGDIELM
Query Conservation    


  

 
 




        ....


 



 
 
  

     
    
    
Alig confidence 
























....






























Template Conservation         
  
  

                                             
Template Sequence  STQYCCDGLRGPFVVYDPNDPQASLYDIDNDDTVITLADWYHVAAKLGPRFPPGSDATLI
Template Known Secondary structure  TTGGG.GT

TT
TTGGG
SB
SGGG
SS
TTTS
SS
SS
S
Template Predicted Secondary structure 














































   209210.... .....220.........230.......
Predicted Secondary structure 



.....










..........................
Query Sequence  RGDSSA. . . . . FPGETWKAKMGDKVRFHLINITE. . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 



  ..... 
  

 
  

 






 
 ..........................
Alig confidence 





.....






















..........................
Template Conservation 

                   
   
 
  
                      

    
Template Sequence  NGLGRSPGTTAADLAVIKVTQGKRYRFRLVSLSCCDPNHTFSIDGHTMTIIEADSVNTQP
Template Known Secondary structure  TTB


TT
TTS...
TT


S.S

TT

TT
Template Predicted Secondary structure 


































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation         
  
 
 

 
                                          
Template Sequence  LEVDSIQIFAAQRYSFVLDASSQPVDNYWIRANPSFGNTGFAGGINSAILRYLGAPEIEP
Template Known Secondary structure  SB
TT


.S
SSSSSS
S
GGGTTTTS
SS

Template Predicted Secondary structure 

































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  TTTQTTPTKPLTEVDLHPLTPMMAVPGRPEPGGVDKPLNMVFNFNGTNFFINNNHSFVPP
Template Known Secondary structure 






SSB

GGG

BSS

...SS
SSTT
SS


SS
TT.B




Template Predicted Secondary structure 














































   238.240.........250..
Predicted Secondary structure  .............................................







Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EAHTFHTHGHRWLDK
Query Conservation  .............................................  







 
 

Alig confidence  .............................................














Template Conservation                                                 

 
 
   
 
 
Template Sequence  SVPVLLQILSGAQAAQDLVPEGSVYVLPSNSSIEISFPATVNAPGAPHPFHLHGHTFAVV
Template Known Secondary structure  SS
TT

SGGGSSSTTS
TT


TTS
S.S.TT

Template Predicted Secondary structure 





































   253 ......260.... .....270.........280.........290.........300.
Predicted Secondary structure 
..........



.

















Query Sequence  S. . . . . . . . . . CDKLIDTIGLN. PFDSYVLDFVAGEGVGKGNWAFHCQSQEHMMNGMFGI
Query Conservation   ..........    



 
 .



 

 
 


   

 






  
   



 
Alig confidence 
..........










.












...




















Template Conservation                  

                  ... 
    


   
   

   
Template Sequence  RSAGSSEYNYDNPIFRDVVSTGTPGDNVTIRFQTAN. . . PGPWFLHCHIDFHLDAGFAVV
Template Known Secondary structure 
TT




SSS..S

STT


S...
SSTT
Template Predicted Secondary structure 

























...




   302.......310.........320.........330...
Predicted Secondary structure 





















Query Sequence  FMVEEGKRVNAVIASCDEGRKTLSAPGQDRQP
Query Conservation 
 


                           
Alig confidence 































Template Conservation                                  
Template Sequence  MAEDTPDDTTAANPVPQAWSDLCPIYDALDPS
Template Known Secondary structure 
.S...TTS
GG
Template Predicted Secondary structure 























Download:Text version FASTA version

No model constructed - rank, confidence too low


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions