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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence98.55%DateWed Nov 27 10:14:46 GMT 2024
Rank126Aligned Residues204
% Identity18%Templatec6r2qA_
PDB info PDB header: electron transportChain: A: PDB Molecule: PDBTitle: structure of the mtr complex
PDB Entry: PDBe RCSB PDBj
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   401........410. ........420.........430.........440...
Predicted Secondary structure 



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Query Sequence  YRPDQCVECHE. . ETTPGIVAEWKMSNHANPKKNPHVSAETQEIE. . . . . . . . . . . . . . .
Query Conservation       

 

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Template Conservation       
  

                        
  

                     
Template Sequence  KGADSCLMCHKKMDLFKGVHGAIDSSKSPMAGLQCEACHGPLGQHNKEPMITFGKQSTLS
Template Known Secondary structure 


TTS
SSS


SSTT

SSSSSSTTTTTT

SSBSSSSTT
B



SSSS
Template Predicted Secondary structure 
















































   444.....450.........460.........470......... 480........
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Query Sequence  . . . . . . . . . . . . ALIGKELNNWRPGTKDGVYCSYCHGSDHEKLFMPTV. . . DNSCGACHP
Query Conservation  ............                 
 
  

   
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Template Conservation         
  

                   
  

                  
  

 
Template Sequence  AEKQNSVCMSCHQDDKRVSWNGSHHDNADVACASCHQVHVAKDPVLSKNTEMEVCTSCHT
Template Known Secondary structure 
SSTT

SSSTTGGG
TTGGGT




SSSS
GGGSTTTTTT
Template Predicted Secondary structure 











































   489490.........500.........510.........520.........530.........540.
Predicted Secondary structure 






















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Query Sequence  KQAAEFIKGRDHGRPNHPQSWEGNVSTPWYAEYYRRGEGYSMVGCDQCHQNMS. . . . . . .
Query Conservation   
  
                      
               

  



 
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Template Conservation                      
  

                   
  

           
Template Sequence  KQKADMNKRSSHPLKWAQMTCSDCHNPHGSMTDSDLNKPSINETCYSCHAEKRGPKLWEH
Template Known Secondary structure  TTSSB

STTTTS

GGGTB
TT

SSTT
BSSSSTT
GGG
S

SB

Template Predicted Secondary structure 





















































   542.......550 .........560.........570.........580.........590...
Predicted Secondary structure  .....








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Query Sequence  . . . . . SCDDCHSRH. . . RFSAAEARRPEACSICHMGPDHPDWESYSRSKWGVIYETTKER
Query Conservation  ..... 
 





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Template Conservation        
  

                  
  

                          
Template Sequence  APVTENCVTCHNPHGSVNDAMLKTRAPQLCQQCHASDGHASNAYLGNTGLGSNVGDNAFT
Template Known Secondary structure 
GGGTB
SS
BSSGGGBSS



SSTTSS



S
SSS

TTSSTTT
Template Predicted Secondary structure 
















































   594.....600.........610.........620
Predicted Secondary structure 




















Query Sequence  WNWDKNLAEVIPGEDYLAPTCQYCHMY
Query Conservation   
       
  
 

 








 
Alig confidence  ................










Template Conservation  ................    
  

  
Template Sequence  . . . . . . . . . . . . . . . . GGRSCLNCHSQ
Template Known Secondary structure  ................STTGGGGT


Template Predicted Secondary structure  ................










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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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