|   |
460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | |
480 | . | . | . | . | . | . | . | . | . | 490 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 500 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . |  |  |  |  |  |  |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
Query Sequence |   |
G | V | Y | C | S | Y | C | H | G | S | D | H | E | K | L | F | M | P | T | V | . |
D | N | S | C | G | A | C | H | P | K | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | A | E | F | I | K | G | R | D | H | G |
Query Conservation |   |
  |
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   | . |   |   |   |
|   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | I | N | C | K | Y | C | H | S | A | A | R | V | S | K | T | A | G | I | P | S | L | N | V | C | M | N | C | H | K | N | I | S | E | V | A | E | T | T | A | T | A | E | Y | S | K | A | F | Y | D | A | Q | I | Q | K | L | Y | D | A | V |
Template Known Secondary structure |   |
|
|
|  |  |  |  | S |
| T | T | T | T | S | S |
|
| . | . | . | . | T | T |  |  |  |  | S | T | T | S |
|
| S |
|
| S | S | S |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
  |   |
502 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | |
. | . | . | . | . | . | . | . | . | 540 | |
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Query Sequence |   |
R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | N | H | P | Q | S | W | E | G | N | V | S | T | P | W | Y | A | E | Y | Y | R | R | G | E | G | Y | S | M | . |
V | G | C | D | Q | C | H | Q | N | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |
|
|   |   |
|
|
|
|   | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | W | D | K | T | K | Q | A | Y | T | G | K | T | Q | P | V | K | W | V | R | I | H | N | L | P | D | F | V | Y | F | N | H | S | Q | H | V | S | V | A | G | V | E | C | Q | T | C | H | G | P | V | Q | E | F | E | I | M | K | Q | Y | S |
Template Known Secondary structure |   |
T |  |  | T | T | T | T |  |  |
| S |
|
|
|
|
|
|
|
|
|
|
|
|
|
| T | T |
|
|
|
| S | S | T | T | T | T | S | S |
|
|
| T | T | T | T | T |
|
| G | G | G |
| S | S |
|
|
|
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
541 | . | . | . | . | . | . | . | . | 550 | . | |
|
|
|
|
|
|
|
. | . | |
|
|
|
|
. | . | . | . | . | . | 560 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
| . | . | . | . | . |  |  |  |
|
|
|  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
Query Sequence |   |
. |
. |
. |
. |
S | S | C | D | D | C | H | S | R | H | R | . |
. |
. |
. |
. |
. |
. |
. |
F | S | . |
. |
. |
. |
. |
A | A | E | A | R | R | P | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | C | S | I | C | H |
Query Conservation |   |
. | . | . | . |
|   |
|   |
|
|
|
|
|
|   | . | . | . | . | . | . | . | . |
|
| . | . | . | . | . |   |   |
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|
|
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
| . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
Template Sequence |   |
K | L | T | M | G | W | C | V | D | C | H | R | K | T | D | V | K | M | E | G | N | A | Y | Y | E | K | I | H | A | E | L | S | K | K | Y | G | V | E | K | L | T | A | A | Q | M | G | G | L | E | C | G | K | C | H |
Template Known Secondary structure |   |
|
| S | S | S | S |  |  |  |  |  |  | T |
| B |
|
|
| S | S |
| S | T | T |  |  |  |  | S | S | S | T | T | T | T |
| S |
|
| B | T |  |  |  |  | T |
|
|
| T | T | T | S |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|