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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence99.97%DateWed Nov 27 10:14:46 GMT 2024
Rank57Aligned Residues257
% Identity22%Templatec4bxsB_
PDB info PDB header: blood clottingChain: B: PDB Molecule: PDBTitle: crystal structure of the prothrombinase complex from the venom of2 pseudonaja textilis
PDB Entry: PDBe RCSB PDBj
Resolution3.32 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70. ........80..
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Query Sequence  AVHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPT. . . . . . . . . . . . . . . VPGPVIKVREG
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Template Conservation                              .....                           
Template Sequence  LREYHIAAQLEDWDYNPQLTFKKIVYRE. . . . . YELDFKQEKPRDALSGLLGPTLRGEVG
Template Known Secondary structure 


S
SSS


.....

GGGSS




SSSTTS
..B


SS
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   83......90.........100.........110......... 120.........130......
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Query Sequence  TKVKILFRNKLTVPASIHPHGVKYTTANVGVNIAGNP. . . . . . ASIVAPGDSRIFEWDTA
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Template Conservation                                                              
Template Sequence  DSLIIYFKNFATQPVSIHPQSAVYNKWSEGSSYSDGTSDVERLDDAVPPGQSFKYVWNIT
Template Known Secondary structure 
SSS
B


BSSS


TTT



SS



TTTSTTT
B
TT



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   137..140 .........150.........160.........170..... ....180..
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Query Sequence  GTPG. . . . . . . . . TWFYHSYVFERGGEEGLSRGLWGALIVEPVGGDPN. . . . . PPDKEFV
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Template Conservation                       ...                                    
Template Sequence  AEIGPKKADPPCLTYAYYSHV. . . NMVRDFNSGLIGALLICKEGSLNANGSQKFFNREYV
Template Known Secondary structure  SSSS
TTTS
S

TT...TTTT

.TT
B
TTSSBSS
S
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   183......190.........200.........210....... ..220.........230.........240.
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Query Sequence  VFMHAFNVNGQEYYAFNNKSGDIELMRGDSSAFPG. ETWKAKMGDKVRFHLINITEEAHT
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Template Conservation               ......                                         
Template Sequence  LMFSVFDESKNWY. . . . . . RKPSLQYTINGFANGTLPDVQACAYDHISWHLIGMSSSPEI
Template Known Secondary structure 
TTTSSS......

S

TTB
TT



TT


SS

B
Template Predicted Secondary structure 






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   242.......250.........260.........270.........280.........290.........300.
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Query Sequence  FHTHGHRWLDKSCDKLIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHMMNGMFGI
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Template Conservation                                      ...                     
Template Sequence  FSVHFNGQTLEQNHYKVSTINLVGGASVTADMSVSR. . . TGKWLISSLVAKHLQAGMYGY
Template Known Secondary structure 

TT


BBTS
B
S

BTT



S...


TT

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   302.......310.
Predicted Secondary structure 





Query Sequence  FMVEEGKRVN
Query Conservation 
 


     
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Template Conservation            
Template Sequence  LNIKDCGNPD
Template Known Secondary structure 

S


Template Predicted Secondary structure 






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No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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