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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank70Aligned Residues269
% Identity20%Templatec5z1xA_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: laccase; PDBTitle: crystal structure of laccase from cerrena sp. rsd1
PDB Entry: PDBe RCSB PDBj
Resolution1.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90....
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Query Sequence  VHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRNKLT. . . .
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Template Sequence  PVTDIHIVNKDIAP. DGFSRPSVLAGGT. . . . . FPGPLITGQKGDNFKLNVVDDLTDASM
Template Known Secondary structure  S
T.TS

TTS.....SS
..TT




GGG
Template Predicted Secondary structure 


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   95....100.........110.........120.........130.........140.........150...
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Query Sequence  . VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFERGG
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Template Conservation        
 

                      
    
        
   

 
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Template Sequence  LKSTSIHWHGFFQKGTNWADGPAFVNQCPISTGNSFLYNFQVPDQAGTYWYHSHL. . . . .
Template Known Secondary structure 
S
B
T


TT
GGGS

BTTTB..B.TT

SS


S.....
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   154.....160.........170....... ..180.........190.........200.......
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Query Sequence  EEGLSRGLWGALIVEPVGGDPNPP. . . . DKEFVVFMHAFNVNGQEYYAFNNKSGDIEL. .
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Template Conservation        
  
   
                                            

Template Sequence  STQYCDGLRGAFVVYDPTDPHKALYDVDDESTVITLADWYHTLARQIVGVAIADTTLING
Template Known Secondary structure  TTGGGGT

TT
TTGGG
SB
SGGG
SS
GGG

SS



TT
Template Predicted Secondary structure 




































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                      
     
  
                     

       
Template Sequence  LGRNTNGPADAALAVINVEAGKRYRLRLVSISCDPNYVFSIDNHDFNIIEVDGVNSKPLN
Template Known Secondary structure  B


TTS
TTS...
TT


SS

TT

TT
Template Predicted Secondary structure 






























  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation       
  
 
    
                                            
Template Sequence  VDSIQIFAGQRYSAVLNANQPVGNYWVRANPNLGTTGFTGGINSAILRYKGAPVAEPTTT
Template Known Secondary structure  SB
TT


S.SSSSSS
S
GGGTTTTS
SS




Template Predicted Secondary structure 

































   208.210.........220
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MRGDSSAFPGETW. . .
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Template Conservation                                                 
            
Template Sequence  QTTSTKPLQEPNLRPLVSMPVPGSATPGGVDVVHNLILGFSAGKFTINGAAFTPPSVPVL
Template Known Secondary structure 



SSB

GGG

BSS

..SS
SSTT
SS

TTTTB




SS
Template Predicted Secondary structure 






































   221........230...... ...240.........250......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . KAKMGDKVRFHLINIT. EEAHTFHTHGHRWLDKSCDK. . .
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Template Conservation                                          

 
 
   
 
        
Template Sequence  LQILSGTTNAQDLLPSGSVITLPIGKTIELTLAAGVLGGPHPFHLHGHNFHVVRSAGQTT
Template Known Secondary structure  TT


GGGSSSTTS
TT





TT


TT


TT

S
Template Predicted Secondary structure 




































   257..260..... ....270.........280.........290.........300........
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Query Sequence  . . . . . . . LIDTIGLNP. FDSYVLDFVAGEGVGKGNWAFHCQSQEHMMNGMFGIFMVEEGK
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Template Conservation           
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Template Sequence  PNYVDPIVRDVVNTGGTGDNVTIRFTTDN. . . PGPWFLHCHIDWHLEAGFAVVFAEGVNQ
Template Known Secondary structure 


SS

S

STT




S...
SSTT
T
Template Predicted Secondary structure 



















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   309310.........320.
Predicted Secondary structure 








Query Sequence  RVNAVIASCDEGR
Query Conservation               
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Template Conservation               
Template Sequence  TNAANPTPADWNN
Template Known Secondary structure 



Template Predicted Secondary structure 







Download:Text version FASTA version

No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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