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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank102Aligned Residues267
% Identity18%Templatec6kliA_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: laccase; PDBTitle: crystal structure of the zea mays laccase 3 complexed with sinapyl
PDB Entry: PDBe RCSB PDBj
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90........
Predicted Secondary structure 


























Query Sequence  VHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRNKLTVPAS
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Template Conservation                 .            ..... 


 
    
        
       
Template Sequence  THYDFVITETKVTRL. CHEKTILAVNGQ. . . . . FPGPTIYARKDDVVIVNVYNQGYKNIT
Template Known Secondary structure 
T.TTTB.....SS
..TT

SSS
B
Template Predicted Secondary structure 



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   99100.........110.........120.........130.........140.........150........
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Query Sequence  IHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFERGGEEGLS
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Template Conservation   
 

         
         
 

             
   

 
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Template Sequence  LHWHGVDQPRNPWSDGPEYITQCPIQPGANFTYKIIFTEEEGTLWWHAHS. . . . . . EFDR
Template Known Secondary structure  T


TT
GGGT

BTTTB

B
TT

SS


S......TTGG
Template Predicted Secondary structure 


































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   159160.........170....... ..180.........190...
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Query Sequence  RGLWGALIVEPVGGDPNPP. . . DKEFVVFMHAFNVNGQ. . . . . . . . . . . . . . . . . . . . . .
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Template Conservation      
  

                  
   
                            
Template Sequence  ATVHGAIVIHPKRGTVYPYPKPHKEMPIILGEWWNADVEQILLESQRTGGDVNISDANTI
Template Known Secondary structure  GTS..TT


SS...S
SS

S.....S
Template Predicted Secondary structure 






































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation 

                    
   
 
  
                  
  

     
Template Sequence  NGQPGDFAPCSKEDTFKMSVEHGKTYLLRVINAGLTNEMFFAVAGHRLTVVGTDGRYLRP
Template Known Secondary structure  TTB

TTSTT
GGG


TT


SS
TTB
TT
Template Predicted Secondary structure 































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation            
 
    
                                          
Template Sequence  FTVDYILISPGQTMNMLLEANCATDGSANSRYYMAARPFFTNTAVNVDDKNTTAIVEYTD
Template Known Secondary structure  S

TT


S

SSSS
S


TTS





TT
Template Predicted Secondary structure 































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  APPSASAGPPDSPDLPAMDDIAAATAYTAQLRSLVTKEHPIDVPMEVDEHMLVTISVNTI
Template Known Secondary structure  S
GGGGSS..B


...TT
TT

B

SSSS





S
S
Template Predicted Secondary structure 












































   194.....200.........210.........220
Predicted Secondary structure  ...


















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Query Sequence  . . . EYYAFNNKSGDIELMRGDSSAFPGETW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                              
Template Sequence  PCEPNKTCAGPGNNRLAASLNNVSFMNPTIDILDAYYDSISGVYEPDFPNKPPFFFNFTA
Template Known Secondary structure  ...TT



SGGG
TT


SS
T
TTS
BS


SS
SS


TT
Template Predicted Secondary structure 














































   221........230..... ....240.........250....
Predicted Secondary structure  .................




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Query Sequence  . . . . . . . . . . . . . . . . . KAKMGDKVRFHLINI. . . TEEAHTFHTHGHRWLDKSC. . . . . .
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Template Conservation                       
                 

 



  
 
         
Template Sequence  PNPPQDLWFTKRGTKVKVVEYGTILEVVFQDTAILGAESHPMHLHGFSFYVVGRGFGNFD
Template Known Secondary structure  SS

GGGGB

B
TT

TTS



TT

SS

Template Predicted Secondary structure 






































   255....260.........270.........280.........290.........300..
Predicted Secondary structure  ............




















Query Sequence  . . . . . . . . . . . . DKLIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHMMNGMFGIF
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Template Conservation                  

  
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Template Sequence  KDKDPATYNLVDPPYQNTVSVPTGGWAAMRFRAAN. . . PGVWFMHCHFDRHTVWGMDTVF
Template Known Secondary structure  TTTGGGG


SS

S..TT
S...
SST
Template Predicted Secondary structure 

























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   303......310.........320
Predicted Secondary structure 










Query Sequence  MVEEGKRVNAVIASCDEG
Query Conservation   


              
Alig confidence 

















Template Conservation   
                
Template Sequence  IVKNGKGPDAQMMPRPPN
Template Known Secondary structure 


SSGGGS.....TT
Template Predicted Secondary structure 














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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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