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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank26Aligned Residues270
% Identity24%Templatec5tb7A_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: nitrite reductase; PDBTitle: structure of nitrite reductase ania from neisseria gonorrhoeae, space2 group p212121
PDB Entry: PDBe RCSB PDBj
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.
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Query Sequence  LTGKDGAVHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRN
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Template Sequence  DRDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGD. . . . . VPGRMIRVREGDTVEVEFSN
Template Known Secondary structure 

SS

TTTTB.....SS

BTT.
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   92.. .....100.........110.........120.........130.........140.........
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Query Sequence  KLT. . VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVF
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Template Conservation               
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Template Sequence  NPSSTVPHNVDFHAAT. . . GQGGG. . . . AAATFTAPGRTSTFSF. KALQPGLYIYHCAVA
Template Known Secondary structure 
TT
SS
B

TT

...SGGGG....TTT

B
TT
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S


.S
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   150.........160.........170.........180.........190. ........200..
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Query Sequence  ERGGEEGLSRGLWGALIVEPVGGDPNPPDKEFVVFMHAFNVN. . . . . . . GQEYYAFNNKS
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Template Sequence  . . PVGMHIANGMYGLILVEPKE. GLPKVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAVA
Template Known Secondary structure  ..STT

TT.
...
S
BSS.TT

.B
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   203......210........ .220.........230...... ...240.........250......
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Query Sequence  GDIELMRGDSSAFPGE. . . TWKAKMGDKVRFHLINIT. EEAHTFHTHGHRWLDKSCDK. .
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Template Sequence  EQPEYVVFNGHVGAIAGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGK
Template Known Secondary structure  T

STTSTTTTSGGG
TT
SS

T

BSGGGSS
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   257..260.........270.........280.........290.... .....300.........310.
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Query Sequence  . . . . LIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHM. MNGMFGIFMVEEGKRVN
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Template Conservation               
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Template Sequence  LINENVQSTIVPAGGSAIVEFKVDI. . . PGNYTLVDHSIFRAFNKGALGQLKVEGAENPE
Template Known Secondary structure 

SBS

TT

S...
SSSS
S


TT
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   312.......320
Predicted Secondary structure 




Query Sequence  AVIASCDEG
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Template Conservation           
Template Sequence  IMTQKLSDT
Template Known Secondary structure  T







Template Predicted Secondary structure 








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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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