Return to main results Retrieve Phyre Job Id

Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence97.12%DateWed Nov 27 10:14:46 GMT 2024
Rank147Aligned Residues108
% Identity22%Templatec3pmqA_
PDB info PDB header: electron transportChain: A: PDB Molecule: decaheme cytochrome c mtrf; PDBTitle: crystal structure of the outer membrane decaheme cytochrome mtrf
PDB Entry: PDBe RCSB PDBj
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   456...460.........470..... ....480........ .490.......
Predicted Secondary structure 















..





................
Query Sequence  GTKDGVYCSYCHGSDHEKLF. . MPTVDNSCGACHP. . . . . . . . . . . . . . . . KQAAEFIKG
Query Conservation       
 
  

   
    ..       
  

 ................ 
  
    
Alig confidence 



















..












................








Template Conservation    
    
  

       
         
  

                        
 
Template Sequence  EVISNAKCASCHGDQQLNIHGARNDLAGQCQLCHNPNMLADATATNPSMTSFDFKQLIHG
Template Known Secondary structure 

B
TTS
SS


BTTTB

TTTTGGGTSSTTS


SSSSSSS
S


Template Predicted Secondary structure 











































   498.500.........510.........520.........530.........540
Predicted Secondary structure 





















.................
Query Sequence  RDHGRPNHPQSWEGNVSTPWYAEYYRRGEGYSMVGCDQCHQNM. . . . . . . . . . . . . . . . .
Query Conservation                    
               

  



 .................
Alig confidence 





...............





















.................
Template Conservation 

    ...............        
     
  

                    
Template Sequence  LHSSQF. . . . . . . . . . . . . . . AGFEDLNYPGNIGNCAQCHINDSTGISTVALPLNAAVQP
Template Known Secondary structure  TTT
S...............TT
TT



S
TT
TTTTB
BSSSSBTT
SS
SS




Template Predicted Secondary structure 



...............































   541........550........ .560.........570...
Predicted Secondary structure  .............














..............









Query Sequence  . . . . . . . . . . . . . SSCDDCHSRHRFSAAEAR. . . . . . . . . . . . . . RPEACSICHMGPDHP
Query Conservation  .............
 
 





 

  


..............

 

  







Alig confidence  .............

















..............














Template Conservation            
    
 


                             
  

      
Template Sequence  LALNNGTFTSPIAAVCSNCHSSDATQNHMRQQGAVFAGTKADATAGTETCAFCHGQGTVA
Template Known Secondary structure 

SSSS



TTSS
SS
SS



TT
SS
STTTTTTT
S

T
SSS
S
Template Predicted Secondary structure 



































   574....
Predicted Secondary structure 
Query Sequence  DWESY
Query Conservation 
 


Alig confidence 




Template Conservation       
Template Sequence  DVLKV
Template Known Secondary structure  STTTT
Template Predicted Secondary structure 
Download:Text version FASTA version

No model constructed - rank, confidence too low


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions