Return to main results Retrieve Phyre Job Id

Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence98.14%DateWed Nov 27 10:14:46 GMT 2024
Rank146Aligned Residues108
% Identity22%Templatec8x2jA_
PDB info PDB header: membrane proteinChain: A: PDB Molecule: PDBTitle: cryo-em structure of the photosynthetic alternative complex iii with a2 quinone inhibitor hqno from chloroflexus aurantiacus
PDB Entry: PDBe RCSB PDBj
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   460.........470......... 480.........490......... 500.........510.....
Predicted Secondary structure 















.

...






Query Sequence  GVYCSYCHGSDHEKLFMPTV. DNSCGACHPKQAAEFIKGRD. . . HGRPNHPQSWEGNVST
Query Conservation   
 
  

   
        .   
  

  
  
      ...                
Alig confidence 



















.



















...















Template Conservation     
  

                
  

                               
Template Sequence  GIDCRYCHTSVDQSYFANIPATETCMTCHSQIKTYSPLLEKVRESYATGKPIEWVKVYDL
Template Known Secondary structure 


STTTTTSSS.....TTTT
S
TTSBTTBS






SS

Template Predicted Secondary structure 









































   516...520.........530....... ..540.........550.........
Predicted Secondary structure 











..............


















..
Query Sequence  PWYAEYYRRGEGYSMVGCDQCH. . . . . . . . . . . . . . QNMSSCDDCHSRHRFSAAEARR. .
Query Conservation 
               

  

..............

 
 
 





 

  



..
Alig confidence 





















..............





















..
Template Conservation                   
  

                   
  

              
Template Sequence  PNFVYFNHSIHVNKGIGCSTCHGQVNNMPVVWQQQALYMGWCLNCHRNPELYVRPREEVY
Template Known Secondary structure 
SSS


TT

S

GGG
SS

BSS



GGGT


TTSSS
Template Predicted Secondary structure 




































   560 .......
Predicted Secondary structure  ............................


Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . P. EACSICH
Query Conservation  ...........................
. 

  

Alig confidence  ...........................
.






Template Conservation                                 
  

Template Sequence  NMDYVPPSNQLEIGRQLVAEYGIMPPDQLTNCYVCH
Template Known Secondary structure 
TT



SS
T...

Template Predicted Secondary structure 






























Download:Text version FASTA version

No model constructed - rank, confidence too low


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions