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Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence95.64%DateWed Nov 27 10:14:46 GMT 2024
Rank165Aligned Residues131
% Identity15%Templatec7ateB_
PDB info PDB header: membrane proteinChain: B: PDB Molecule: PDBTitle: cytochrome c oxidase structure in p-state
PDB Entry: PDBe RCSB PDBj
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60......
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Query Sequence  ALVPVVLAFLFLFLCFQCLYADIRCLTGKDGAVHLEMEAKPLTIEPRPGVFFDAWGYCLK
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Template Sequence  TLVPVLILVAIGAFSLPILFRSQ. . EMPNDPDLVIKAIGHQW. . . . . . . . . . . YWSYEYP
Template Known Secondary structure  ..S

SS
STT...........G
Template Predicted Secondary structure 
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   67..70.. .......80.........90.........100...
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Query Sequence  GDVPTV. . . . . . . . . . . . . . . . . . . . . . . PGPVIKVREGTKVKILFRNKLTVPASIHPHG
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Template Sequence  NDGVAFDALMLEKEALADAGYSEDEYLLATDNPVVVPVGKKVLVQVTATD. . . . VIHAWT
Template Known Secondary structure  GGT
B..TTTT

GGGTTT
BSS
TTS
SS....S
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   104.....110.........120.........130.........140.........150.........160...
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Query Sequence  VKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFERGGEEGLSRGLWG
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Template Sequence  IP. . . . . . . . . . AFAVKQDAVPGRIAQLWF. SVDQEGVYFGQCSELCG. . . . INHAYMPI
Template Known Secondary structure  G..........GGT
TT

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SSS

S

S....TTGGG
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   164.....
Predicted Secondary structure 
Query Sequence  ALIVEP
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Template Sequence  VVKAVS
Template Known Secondary structure 
Template Predicted Secondary structure 
Download:Text version FASTA version

No model constructed - rank, confidence too low


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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