Return to main results Retrieve Phyre Job Id

Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank106Aligned Residues264
% Identity18%Templatec8rfxA_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: copper-containing nitrite reductase; PDBTitle: high ph (8.0) as-isolated msox movie series dataset 5 of the copper2 nitrite reductase from bradyrhizobium sp. ors375 (two-domain) [2.053 mgy]
PDB Entry: PDBe RCSB PDBj
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.... .....60.........70.........80.........90
Predicted Secondary structure 







.

















Query Sequence  LTGKDGAVHLEMEAKPLTIEPRP. GVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFR
Query Conservation            
  
     
  
.

    

 



   








 




 
 
 
Alig confidence 






















.











.....


















Template Conservation             
                        ..... 


 
    
        
Template Sequence  TKQGPKIMEFKLVVQEKKMVIDEKGTTFQAMTFNGS. . . . . MPGPLMVVHEGDYVEVTLV
Template Known Secondary structure 






STT

TTB.....SS..TT
Template Predicted Secondary structure 













.....







   91... .....100.........110.........120.........130.........140........
Predicted Secondary structure 


..





































Query Sequence  NKLT. . VPASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYV
Query Conservation 
 
 ..









  
   


   
 

  
 






 
 

  









Alig confidence 



..










.......




















.













Template Conservation 
             
  .......          
 

       .     
        
Template Sequence  NPATNTMPHNIDFHSAT. . . . . . . GALGGGALTLINPGEQVVLRW. KATRTGVFVYHCAP
Template Known Secondary structure 
TT

S
B

TTS
.......SGGGGGGG

B
TT.

S



Template Predicted Secondary structure 









.......











.






   149150.........160.........170..... ....180.........190.......
Predicted Secondary structure 














......












.....
Query Sequence  FERGGEEGLSRGLWGALIVEPVGGDPN. . . . . . PPDKEFVVFMHAFNVNGQEYYA. . . . .
Query Conservation        


  

 
 




      ......  


 



 
 
  

    .....
Alig confidence 


























......





















.....
Template Conservation             
  
   
                                         
Template Sequence  GGPMIPWHVVSGMNGAVMVLPRDGLNDGHGHSLRYDRIYYIGEQDLYVPRDEKGNFKSYD
Template Known Secondary structure  STTTT

TT

SSS


S


B
TTS.B.

S
Template Predicted Secondary structure 






































   198.200.........210....... ..220.........230...... ...240...
Predicted Secondary structure  ............













.






.




Query Sequence  . . . . . . . . . . . . FNNKSGDIELMRGDSSAFPG. ETWKAKMGDKVRFHLINIT. EEAHTFH
Query Conservation  ............ 
    
    



   
 . 

 
  

 






 
.   



Alig confidence  ............



















.










..





.






Template Conservation                         

               
   ..              
Template Sequence  SPGEAYSDTEEVMRKLTPTHVVFNGKAGALTGKNALNANVGENV. . LIVHSQANRDSRPH
Template Known Secondary structure  STT

STTSTTTTSGGG.TT
..SSS
B
Template Predicted Secondary structure 





























..







   244.....250..... ....260.........270.........280.........290....
Predicted Secondary structure 






........
















.
Query Sequence  THGHRWLDKSCD. . . . . . . . KLIDTIGLNPFDSYVLDFVAGEGVGKGNWAFHCQSQEHM.
Query Conservation 



 
 

   ........  



 
 



 

 
 


   

 






  
 .
Alig confidence 











........





















...













.
Template Conservation              
                 
           ... 
             
Template Sequence  LIGGHGDYVWETGKFSNAPETGLETWFIRGGSAGAALYKFLQ. . . PGIYAYVTHNLIEAA
Template Known Secondary structure  T

SS

TTS..SB

B
TT

S...
S
Template Predicted Secondary structure 
























...





   295....300.........310...
Predicted Secondary structure 








Query Sequence  MNGMFGIFMVEEGKRVNAV
Query Conservation    



 
 


       
Alig confidence 


















Template Conservation    
                
Template Sequence  NLGATAHFKVEGKWNDDLM
Template Known Secondary structure  SS
S


TTT
Template Predicted Secondary structure 












Download:Text version FASTA version

No model constructed - rank, confidence too low


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions