Return to main results Retrieve Phyre Job Id

Job DescriptionSwiss-Prot_entry_P0DV45_from_UniProt
Confidence100.00%DateWed Nov 27 10:14:46 GMT 2024
Rank113Aligned Residues253
% Identity18%Templatec6evgA_
PDB info PDB header: oxidoreductaseChain: A: PDB Molecule: multi-copper oxidase cueo; PDBTitle: structural and functional characterisation of a bacterial laccase-like2 multi-copper oxidase cueo from lignin-degrading bacterium3 ochrobactrum sp. with oxidase activity towards lignin model compounds4 and lignosulfonate
PDB Entry: PDBe RCSB PDBj
Resolution1.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.....
Predicted Secondary structure 



























Query Sequence  DGAVHLEMEAKPLTIEPRPGVFFDAWGYCLKGDVPTVPGPVIKVREGTKVKILFRNKLTV
Query Conservation        
  
     
  


    

 



   








 




 
 
 
 
 
Alig confidence 


..

























.....























Template Conservation     ..                       
  ..... 


 
    
    
   
    
Template Sequence  SGV. . VKLKVQTGRHSFEEGSEAASAGINGA. . . . . YLGPLVRLKNGETVTLSVENGMDE
Template Known Secondary structure  TS..
SSTT

SSS.....SB

TT

SSS
Template Predicted Secondary structure 


..








.....










   96...100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 









































Query Sequence  PASIHPHGVKYTTANVGVNIAGNPASIVAPGDSRIFEWDTAGTPGTWFYHSYVFERGGEE
Query Conservation 








  
   


   
 

  
 






 
 

  









      
Alig confidence 
















.....
































.



Template Conservation      
 

       

.....     
 

             
    
 
   .    
Template Sequence  GTTLHWHGLFVPSILDG. . . . . GPHNVIAAGEAWKPEVKIQQPASFNWFHPHLHG. NTAR
Template Known Secondary structure 
B

T



GGGS
.....STTS
B
TT




S




SS.
Template Predicted Secondary structure 













.....






















.

   156...160.........170....... ..180.........190...
Predicted Secondary structure 











.....






.................
Query Sequence  GLSRGLWGALIVEPVGGDPNPP. . . . . DKEFVVFMHAFNVNGQ. . . . . . . . . . . . . . . . .
Query Conservation 

  

 
 




        .....


 



 
 
  

.................
Alig confidence 





















.....















.................
Template Conservation      

 
 


                                                
Template Sequence  QAHLGIAGLMVVTDGKDAERGLPEDYGVDDIPLVLQDRRVIEGDKVYEPDIMDLMHGFRG
Template Known Secondary structure  T


S
TTTTT



BTTTS
SSBS









Template Predicted Secondary structure 









































  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation       

             
 

 
                      

     
    
Template Sequence  GNLIVNGIVSPEARVPASIVRLRILNGANARNFHVRLSDNRPLLVVASDGGFIGNPEPVE
Template Known Secondary structure  STTS

SS
SSS..TT


TTS
Template Predicted Secondary structure 






























  
Predicted Secondary structure  ............................................................
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation     
  
 
                                                   
Template Sequence  RLTISPGERYEVLVDFSKGEATDLLTYGDDSGGDDLHLMRFVVDAALQGKVTKRPDRLDG
Template Known Secondary structure  S
TT

TT


SSTT
..
TT


S

S






Template Predicted Secondary structure 



































   194.....200.........210.........220.......
Predicted Secondary structure  ..........................





















Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . EYYAFNNKSGDIELMRGDSSAFPGETWKAKMGDK
Query Conservation  ..........................     
    
    



   
  

 
  

 
Alig confidence  ..........................

































Template Conservation                                           
                  
Template Sequence  PDAPDEKLSVKRRSFFFDERMAENMKLMMLEALTSGVEMAIAGKPFDMDRIDVEAKLGSW
Template Known Secondary structure 




GGG
S

B

SSSGGGS



BSSSS


TT



TT
Template Predicted Secondary structure 


















































   228.230.........240.........250...... ...260.........270........
Predicted Secondary structure 















.........







Query Sequence  VRFHLINITEEAHTFHTHGHRWLDKSCDK. . . . . . . . . LIDTIGLNPFDSYVLDFVAGEG
Query Conservation 






 
   







 
 

    ......... 



 
 



 

 
 


 
Alig confidence 







.



















.........




















.
Template Conservation          .   

 



    
                

  
              .
Template Sequence  EIWDLTTK. EMPHPFHIHGASFRILSLNGKAPPAHQSGWKDTALIDGKAEILVHFDREA.
Template Known Secondary structure 
S.SS
SS
TTB...GGGSS
BSSS

S

.
Template Predicted Secondary structure 

.

























.
   279280... ......290.........300.....
Predicted Secondary structure 




..





Query Sequence  VGKGN. . WAFHCQSQEHMMNGMFGIFMVE
Query Conservation    

 ..






  
   



 
 

Alig confidence  ..


..





















Template Conservation  .. 
   
  


   
   

       
Template Sequence  . . VKSHPFMFHCHVLEHEDVGMMAQFVTV
Template Known Secondary structure  ..
TTS
SSTT

Template Predicted Secondary structure  ..

















Download:Text version FASTA version

No model constructed - rank, confidence too low


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions