Job Description Undefined Confidence 99.84% Date Thu Nov 13 08:26:15 GMT 2025 Rank 484 Aligned Residues 235 % Identity 10% Template c8qbiA_ PDB info PDB header: lyase Chain: A: PDB Molecule: Photorhabdus luminescens subsp. laumondii TTO1 complete genome segment 15/17 PDBTitle: anti in closed state PDB Entry: PDBe RCSB PDBj Resolution UNK

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50									.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.																	.												.
Query Sequence		P	Q	V	H	Y	R	V	E	Q	V	G	D	V	K	V	F	Y	R	E	A	G	D	P	.	.	.	.	.	.	.	.	A	A	P	A	V	L	L	L	H	G	F	A	A	S	S	Y	.	M	W	R	D	V	I	E	A	L	A	D	.
Query Conservation																									.	.	.	.	.	.	.	.																	.												.
Alig confidence																									.	.	.	.	.	.	.	.																	.												.
Template Conservation
Template Sequence		L	L	V	D	H	Q	Y	I	V	V	D	K	F	H	M	P	F	F	L	I	F	P	K	G	Y	K	E	E	E	N	H	P	L	P	C	V	I	L	S	N	G	L	D	S	M	T	E	I	E	I	L	S	L	A	E	F	F	L	G	K
Template Known Secondary structure		S										T	T											T	T			G	G	G		.	.										S	S																T	T
Template Predicted Secondary structure
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query Sequence		G	Y	H	V	I	A	P	D	L	P	A	F	G	Y	T	E	A	P	A	R	G	Q	Y	D	Y	T	F	A	N	L	T	K	T	I	E	R	F	T	D	Q	L	.	.	.	K	L	T	R	Y	A	M	A	V	H	D	Y	G	A	P	V
Query Conservation																																											.	.	.
Alig confidence																			.	.																							.	.	.
Template Conservation																			.	.
Template Sequence		N	M	A	V	A	I	F	D	G	P	G	Q	G	I	N	L	G	.	.	K	S	P	I	A	I	D	M	E	L	Y	V	S	S	I	V	K	L	L	E	D	D	A	R	I	N	S	N	L	L	C	F	L	G	I	S	F	G	G	Y	F
Template Known Secondary structure		T									T	T	S	G	G	G	T	T	.	.	T	S	.	.	.	S		T															T	T												T
Template Predicted Secondary structure																			.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query Sequence		G	W	R	L	A	L	A	H	P	S	R	I	T	A	I	I	S	Q	N	G	N	A	Y	E	E	G	L	S	A	G	W	E	P	I	R	K	Y	W	N	D	P	T	A	E	N	R	Q	A	L	S	D	F	P	T	P	A	S	I	K	W
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.
Template Sequence		A	L	R	V	A	Q	R	I	G	D	K	F	C	C	I	V	N	L	S	G	G	P	E	I	A	E	F	D	K	L	P	R	R	L	K	E	D	F	Q	F	A	F	M	Q	D	N	S	H	M	Q	S	I	F	.	.	.	.	.	.	.
Template Known Secondary structure									S	G	G	G		S						S			S	S	.	.	.	G	G	G			T	T										T											.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query Sequence		Q	Y	V	E	G	V	S	D	T	S	L	V	A	P	D	A	Y	T	L	E	G	A	Q	I	L	R	P	G	M	A	D	I	Q	L	D	L	L	L	D	Y	A	T	N	V	E	Q	Y	P	A	F	Q	A	Y	F	R	E	Y	Q	P	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	I	K	L	D	I	S	L	P	C	K	T	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S	.	.	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																										.
Query Sequence		L	L	A	V	W	G	E	H	D	P	F	F	L	P	P	G	A	E	A	W	K	R	D	I	.	P	D	A	D	I	R	L	Y	D	T	G	H	F	A	L	E	T	H	S	E	V	I	I	P	T	I	R	Q	F	L	D	D	H	V	S
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		V	F	T	V	H	G	E	L	D	D	I	F	Q	I	D	K	V	K	K	L	D	Q	L	W	G	D	N	H	Q	L	L	C	Y	E	S	E	A	H	V	C	L	N	K	I	N	E	Y	M	I	Q	V	S	D	W	V	S	E	Q	F	W
Template Known Secondary structure								T	T		S	S	S													G	G	G							T	T			G	G	G	G	G	G
Template Predicted Secondary structure
		314	.	.	.
Predicted Secondary structure
Query Sequence		L	H	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	G	Y
Template Known Secondary structure			T	T
Template Predicted Secondary structure

No model constructed - rank, confidence too low

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Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
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