250 c8clpA_ Probab=99.97  E-value=8e-30  Score=193.67  Aligned_cols=279  Identities=13%  Similarity=0.118  Sum_probs=0.0  Template_Neff=13.351

Q ss_pred             CCCcccCCCCCcceeEEEEeCCeEEEEEEccCCCCCEEEEECCCCCCHHHHHHHHHHHhC
Q Undefined        18 HAPGGRASAAPQVHYRVEQVGDVKVFYREAGDPAAPAVLLLHGFAASSYMWRDVIEALAD   77 (323)
Q Consensus        18 ~~~~~~~~~~~~~~~r~~~~dG~~i~y~~~G~~~~p~ivllHG~~~~~~~~~~~~~~L~~   77 (323)
                      ................+++++|.+++|...|++++|+|||+||++++...|..+++.|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~   60 (294)
T c8clpA_           1 SPALRDVHVPHAYPEQQVDLGEITMNYAEAGDPDRPAVLLIPEQTGSWWSYEEAMGLLSE   60 (294)
T ss_pred             CCcccccCCCCCccceeEeccceEEEeccCCCCCCCeEEEECCCCCChhhHHHHHHHHhc


Q ss_pred             CCEEEEECCCCCCCCCCCCcccccccHHHHHHHHHHHHhhcCCcceeeeeecchhHHHHH
Q Undefined        78 GYHVIAPDLPAFGYTEAPARGQYDYTFANLTKTIERFTDQLKLTRYAMAVHDYGAPVGWR  137 (323)
Q Consensus        78 ~~~Via~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~  137 (323)
                      +|+|+++|+||+|.|...   ....+.....+++..++......+++++|+|+||.+++.
T Consensus        61 ~~~v~~~d~~g~g~s~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~  117 (294)
T c8clpA_          61 HFHVYAVDLRGQGRSSWT---PKRYSLDNFGNDLVRFIALVVKRPVVVAGNSSGGVLAAW  117 (294)
T ss_pred             CCeEEEEecCCCCCCCCC---CCCCCHHHHHHHHHHHHHHhCCCCEEEEEecchHHHHHH


Q ss_pred             HHhhc-hhhccEEEEEcCcCCcccccchhhHHHHHhhhhhhhhHHHhhhhcchHHHHHHH
Q Undefined       138 LALAH-PSRITAIISQNGNAYEEGLSAGWEPIRKYWNDPTAENRQALSDFPTPASIKWQY  196 (323)
Q Consensus       138 ~~~~~-~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (323)
                      ++..+ ++.+.+++++++.........................................+
T Consensus       118 ~a~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (294)
T c8clpA_         118 LSAYSMPGQLRGVLCEDPPFFASELVPAHGHSVRQGAGPVFELFRTYLGDQWSVGDWEGF  177 (294)
T ss_pred             HHHHhCCCceeEEEecCCCccccccccccccccccCCcchHHHHHHHhcccccccchhhh


Q ss_pred             HhhccCcccCCHHHHHHHHHhhccccchhhHHHHHHhhhhhhhhhhhhhhhhhcCCcceE
Q Undefined       197 VEGVSDTSLVAPDAYTLEGAQILRPGMADIQLDLLLDYATNVEQYPAFQAYFREYQPPLL  256 (323)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~l  256 (323)
                      .........................................          ..++++|++
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~i~~P~l  227 (294)
T c8clpA_         178 CRAAGASVADGIPQHLQEYDPEWARVFYEGTVGLSCPHERM----------LGQVKTPVL  227 (294)
T ss_pred             hhhhcccccCchhhhhhccCccccceeeccccccCCcchhh----------cccCCCcEE


Q ss_pred             EEEeC-------------CCCcCCHHHHHHHHHHCCCCEE-EEeCCccCHhHhCHHHHHH
Q Undefined       257 AVWGE-------------HDPFFLPPGAEAWKRDIPDADI-RLYDTGHFALETHSEVIIP  302 (323)
Q Consensus       257 ii~G~-------------~D~~~~~~~~~~~~~~~p~~~~-~~~~~gH~~~~e~p~~~~~  302 (323)
                      +++|+             .|.....+..+.+.+..+++++ +++++||+.+.++|+++.+
T Consensus       228 ~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~  287 (294)
T c8clpA_         228 LTHHMRGIDPETGNLLGALSDEQALRARRLMDSAGVTVDYESVPDASYMMHQSAPARYVE  287 (294)
T ss_pred             EeecCCCCCCCCcccccCCChHHHHHHHHhhhhcCcceeEEEeCCCCCccccCCHHHHHH


Q ss_pred             HHHHHHH
Q Undefined       303 TIRQFLD  309 (323)
Q Consensus       303 ~i~~FL~  309 (323)
                      .|.+||+
T Consensus       288 ~i~~~l~  294 (294)
T c8clpA_         288 IFTRWAA  294 (294)
T ss_pred             HHHHhhC


