Job Description Undefined Confidence 99.96% Date Thu Nov 13 08:26:15 GMT 2025 Rank 163 Aligned Residues 257 % Identity 16% Template c7f5wA_ PDB info PDB header: plant protein Chain: A: PDB Molecule: High tillering and dwarf 2 protein PDBTitle: conserved and divergent strigolactone signaling in saccharum spontaneum PDB Entry: PDBe RCSB PDBj Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

41

.

.

.

.

.

.

.

.

50

.

.

.

.

.

.

.

.

.

60

.

.

.

.

.

.

.

.

.

70

.

.

.

.

.

.

.

.

.

80

.

.

.

.

.

.

.

.

.

90

.

.

.

.

.

.

.

.

.

100

Predicted Secondary structure

Query Sequence

K

V

F

Y

R

E

A

G

D

P

A

A

P

A

V

L

L

L

H

G

F

A

A

S

S

Y

M

W

R

D

V

I

E

A

L

A

D

G

Y

H

V

I

A

P

D

L

P

A

F

G

Y

T

E

A

P

A

R

G

Q

Y

Query Conservation

Alig confidence

.

Template Conservation

.

Template Sequence

I

L

N

V

R

V

V

G

N

.

G

D

R

V

V

V

L

S

H

G

F

G

T

D

Q

S

A

W

S

R

V

L

P

Y

L

T

R

D

H

R

V

V

L

Y

D

L

V

C

A

G

S

V

N

P

E

H

F

D

F

R

Template Known Secondary structure

T

T

S

.

S

S

T

T

G

G

G

G

T

T

T

G

G

G

T

T

T

T

S

T

T

S

T

T

S

G

G

G

T

T

Template Predicted Secondary structure

.

101

.

.

.

.

.

.

.

.

110

.

.

.

.

.

.

.

.

.

120

.

.

.

.

.

.

.

.

.

130

.

.

.

.

.

.

.

.

.

140

.

.

.

.

.

.

.

.

.

150

.

.

.

.

.

.

.

.

.

Predicted Secondary structure

.

Query Sequence

D

Y

.

T

F

A

N

L

T

K

T

I

E

R

F

T

D

Q

L

K

L

T

R

Y

A

M

A

V

H

D

Y

G

A

P

V

G

W

R

L

A

L

A

H

P

S

R

I

T

A

I

I

S

Q

N

G

N

A

Y

E

E

Query Conservation

.

Alig confidence

.

Template Conservation

Template Sequence

R

Y

D

T

L

D

S

Y

V

D

D

L

L

A

I

L

D

A

L

R

I

P

R

C

A

F

V

G

H

S

V

S

A

M

I

G

I

L

A

S

I

R

R

P

E

L

F

A

K

L

V

L

I

G

A

S

P

R

F

L

Template Known Secondary structure

G

G

G

S

T

T

T

T

T

T

S

S

S

B

Template Predicted Secondary structure

160

.

.

.

.

.

.

.

.

.

170

.

.

.

.

.

.

.

.

.

180

.

.

.

.

.

.

.

.

.

190

.

.

.

.

.

.

.

.

.

200

.

.

.

.

.

.

.

.

.

210

.

.

.

.

.

.

.

.

.

Predicted Secondary structure

Query Sequence

G

L

S

A

G

W

E

P

I

R

K

Y

W

N

D

P

T

A

E

N

R

Q

A

L

S

D

F

P

T

P

A

S

I

K

W

Q

Y

V

E

G

V

S

D

T

S

L

V

A

P

D

A

Y

T

L

E

G

A

Q

I

L

Query Conservation

Alig confidence

.

.

.

.

.

.

.

Template Conservation

.

.

.

.

.

.

.

Template Sequence

N

D

.

.

.

.

.

.

.

N

D

Y

H

G

G

F

E

L

P

E

I

Q

Q

V

F

D

A

M

A

A

N

Y

S

A

W

A

V

G

Y

A

P

L

A

V

G

A

D

V

P

A

A

V

Q

E

F

S

R

T

L

F

Template Known Secondary structure

B

.

.

.

.

.

.

.

T

T

B

S

B

S

S

Template Predicted Secondary structure

.

.

.

.

.

.

.

220

.

.

.

.

.

.

.

.

.

230

.

.

.

.

.

.

.

.

.

240

.

.

.

.

.

.

.

.

.

250

.

.

.

.

.

.

.

.

.

260

.

.

.

.

.

.

.

.

.

270

.

.

.

.

.

.

.

.

.

Predicted Secondary structure

Query Sequence

R

P

G

M

A

D

I

Q

L

D

L

L

L

D

Y

A

T

N

V

E

Q

Y

P

A

F

Q

A

Y

F

R

E

Y

Q

P

P

L

L

A

V

W

G

E

H

D

P

F

F

L

P

P

G

A

E

A

W

K

R

D

I

P

Query Conservation

Alig confidence

.

.

.

.

.

.

Template Conservation

.

.

.

.

.

.

Template Sequence

N

M

R

P

D

I

S

L

H

V

C

R

T

V

F

N

T

.

.

.

.

.

.

D

L

R

G

V

L

G

M

V

R

S

P

C

V

V

V

Q

T

T

R

D

V

S

V

P

A

S

V

A

A

Y

L

R

A

H

L

G

Template Known Secondary structure

S

T

.

.

.

.

.

.

G

G

G

G

G

G

S

S

T

T

S

S

Template Predicted Secondary structure

.

.

.

.

.

.

280

.

.

.

.

.

.

.

.

.

290

.

.

.

.

.

.

.

.

.

300

.

.

.

.

.

.

.

.

.

310

.

Predicted Secondary structure

.

.

Query Sequence

D

.

A

D

I

.

R

L

Y

D

T

G

H

F

A

L

E

T

H

S

E

V

I

I

P

T

I

R

Q

F

L

D

D

H

Query Conservation

.

.

Alig confidence

.

.

Template Conservation

Template Sequence

G

R

T

T

V

E

F

L

Q

T

E

G

H

L

P

H

L

S

A

P

G

L

L

A

Q

V

L

R

R

A

L

A

R

Y

Template Known Secondary structure

S

S

S

S

S

T

S

Template Predicted Secondary structure

No model constructed - rank, confidence too low

---

Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
© Structural Bioinformatics Group, Imperial College, London Michael Sternberg   Disclaimer Terms and Conditions		Phyre2 is part of Genome3D