Phyre 2 alignment of Undefined with c6ra2C_

Job Description Undefined
Confidence 100.00% Date Thu Nov 13 08:26:15 GMT 2025

Rank 457 Aligned Residues 260

% Identity 10% Template c6ra2C_

PDB info PDB header: hydrolase Chain: C: PDB Molecule: Putative dioxygenase (1H-3-hydroxy-4-oxoquinaldine 2, 4-dioxygenase) PDBTitle: structural basis for recognition and ring-cleavage of the pseudomonas quinolone signal (pqs) by aqdc
PDB Entry: PDBe RCSB PDBj

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

33

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40

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50

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60

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70

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80

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90

.

.

Predicted Secondary structure

Query Sequence

R

V

E

Q

V

G

D

V

K

V

F

Y

R

E

A

G

D

P

A

A

P

A

V

L

L

L

H

G

F

A

A

S

S

Y

M

W

R

D

V

I

E

A

L

A

D

G

Y

H

V

I

A

P

D

L

P

A

F

G

Y

T

Template Sequence

T

T

K

T

V

N

G

V

Q

I

A

F

D

D

Q

G

H

E

P

G

P

V

F

V

T

L

S

G

W

A

H

D

L

R

A

Y

D

G

M

L

P

Y

L

R

A

A

Q

R

T

V

R

V

C

W

R

G

H

G

P

D

Template Known Secondary structure

T

T

S

S

.

T

T

G

G

G

G

T

T

T

S

.

.

T

T

S

S

Template Predicted Secondary structure

93

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100

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110

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120

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130

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140

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150

.

Predicted Secondary structure

.

Query Sequence

E

A

P

A

R

G

Q

Y

D

Y

T

F

A

N

L

T

K

T

I

E

R

F

T

D

Q

L

K

L

T

R

Y

A

M

A

V

H

D

Y

G

A

P

V

G

W

R

L

A

L

A

H

P

.

S

R

I

T

A

I

I

S

Template Sequence

R

N

L

V

G

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.

.

D

F

G

I

D

E

M

A

A

D

T

I

G

L

L

D

A

L

E

V

D

S

F

V

P

I

A

H

A

H

G

G

W

A

A

L

E

I

A

D

R

L

G

A

Q

R

V

P

A

V

M

I

Template Known Secondary structure

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T

S

T

T

S

Template Predicted Secondary structure

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152

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160

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170

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180

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190

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200

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210

.

Predicted Secondary structure

Query Sequence

Q

N

G

N

A

Y

E

E

G

L

S

A

G

W

E

P

I

R

K

Y

W

N

D

P

T

A

E

N

R

Q

A

L

S

D

F

P

T

P

A

S

I

K

W

Q

Y

V

E

G

V

S

D

T

S

L

V

A

P

D

A

Y

Template Sequence

L

D

L

I

M

T

P

A

P

R

.

E

F

V

A

A

L

H

G

.

.

.

.

.

I

Q

D

.

P

E

R

W

K

E

G

.

R

D

G

L

V

Q

S

W

L

.

.

.

.

A

G

T

.

.

T

N

Q

A

V

L

Template Known Secondary structure

S

S

S

.

.

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.

.

.

T

T

.

T

T

T

.

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.

T

T

.

.

Template Predicted Secondary structure

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212

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220

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230

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240

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250

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260

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.

Predicted Secondary structure

.

.

Query Sequence

T

L

E

G

A

Q

I

L

R

P

G

M

A

D

I

Q

L

D

L

L

L

D

Y

A

T

N

V

E

Q

Y

P

A

F

Q

A

Y

F

R

E

Y

Q

P

P

L

L

A

V

W

.

.

G

E

H

D

P

F

F

L

P

P

Template Sequence

D

H

V

R

Y

D

S

G

G

H

G

.

F

D

M

W

A

R

A

G

R

V

I

D

E

A

Y

R

T

W

G

S

P

M

R

R

M

E

A

L

A

E

P

C

A

I

R

H

V

F

S

H

P

K

I

G

E

Y

D

A

Template Known Secondary structure

S

S

S

.

S

S

T

S

S

S

.

S

S

Template Predicted Secondary structure

.

270

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280

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290

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300

.

.

.

.

.

.

.

.

.

310

Predicted Secondary structure

.

Query Sequence

G

A

E

A

W

K

R

D

I

P

D

A

D

I

.

R

L

Y

D

T

G

H

F

A

L

E

T

H

S

E

V

I

I

P

T

I

R

Q

F

L

D

D

Template Sequence

L

H

D

D

F

A

A

R

H

P

W

F

S

Y

R

R

L

G

G

E

T

H

F

P

G

I

E

L

P

Q

Q

V

A

A

E

A

I

D

L

L

A

G

Template Known Secondary structure

T

T

S

S

S

S

Template Predicted Secondary structure

Download:

No model constructed - rank, confidence too low

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg
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