Job Description Undefined Confidence 99.89% Date Thu Nov 13 08:26:15 GMT 2025 Rank 464 Aligned Residues 284 % Identity 9% Template c5xavB_ PDB info PDB header: biosynthetic protein Chain: B: PDB Molecule: Intracellular polyhydroxyalkanoate synthase PDBTitle: structure of phac from chromobacterium sp. usm2 PDB Entry: PDBe RCSB PDBj Resolution UNK

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.
Predicted Secondary structure																														.	.																			.	.	.	.	.
Query Sequence		R	A	S	A	A	P	Q	V	H	Y	R	V	E	Q	V	G	D	V	K	V	F	Y	R	E	A	G	D	P	.	.	A	A	P	A	V	L	L	L	H	G	F	A	A	S	S	Y	M	W	.	.	.	.	.	R	D	V	I	E	A	L
Query Conservation																														.	.																			.	.	.	.	.
Alig confidence																														.	.																			.	.	.	.	.
Template Conservation
Template Sequence		G	K	N	L	V	V	T	P	G	E	V	V	F	R	N	E	L	I	E	L	I	Q	Y	T	P	T	T	E	K	V	H	E	K	P	L	L	F	V	P	P	C	I	N	K	Y	Y	L	M	D	L	Q	P	D	N	S	M	V	R	H	F
Template Known Secondary structure		T	T	T	B	S											S	S							.	.		S	S				S	S								S	S	S		G	G	G	G	S	S	S	G	G	G
Template Predicted Secondary structure
		76	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure				.
Query Sequence		A	D	.	G	Y	H	V	I	A	P	D	L	P	A	F	G	Y	T	E	A	P	A	R	G	Q	Y	D	Y	T	F	A	N	L	T	K	T	I	E	R	F	T	D	Q	L	K	L	T	R	Y	A	M	A	V	H	D	Y	G	A	P	V
Query Conservation				.
Alig confidence				.																.
Template Conservation																				.
Template Sequence		V	G	Q	G	Y	R	V	F	L	V	S	W	R	S	A	V	P	E	.	M	K	N	F	T	W	E	T	Y	I	E	K	G	V	F	A	A	A	E	A	V	Q	K	I	T	K	Q	P	T	M	N	A	L	G	F	C	V	G	G	V	I
Template Known Secondary structure				T	T									.	.	.		G	G	.	G	T	T																									S								T
Template Predicted Secondary structure																				.
		135	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure					.	.	.	.
Query Sequence		G	W	R	.	.	.	.	L	A	L	A	H	P	S	R	I	T	A	I	I	S	Q	N	G	N	A	Y	E	E	G	L	S	A	G	W	E	P	I	R	K	Y	W	N	D	P	T	A	E	N	R	Q	A	L	S	D	F	P	T	P	A
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.																																															.
Template Conservation																																																							.
Template Sequence		L	T	T	A	L	C	V	A	Q	A	K	G	L	K	Y	F	D	S	A	T	F	M	T	S	L	I	D	H	A	E	P	G	E	I	S	F	F	I	D	E	A	L	V	A	S	R	E	A	K	M	A	A	G	.	G	I	I	S	G	K
Template Known Secondary structure													T											S			S	S		S			G	G	G	G	G	G												T	G	G	G		.
Template Predicted Secondary structure																																																							.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query Sequence		S	I	K	W	Q	Y	V	E	G	V	S	D	T	S	L	V	A	P	D	A	Y	T	L	E	G	A	Q	I	L	R	P	G	M	A	D	I	Q	L	D	L	L	L	D	Y	A	T	N	V	E	Q	Y	P	A	F	Q	A	.	.	.	.
Query Conservation																																																										.	.	.	.
Alig confidence																			.	.	.																																					.	.	.	.
Template Conservation																			.	.	.
Template Sequence		E	I	G	R	T	F	A	S	L	R	A	N	D	L	V	W	N	.	.	.	P	A	P	F	D	L	L	Y	W	N	N	D	A	V	D	L	P	L	P	M	H	T	F	M	L	R	Q	F	Y	I	N	N	A	L	I	T	P	G	A	I
Template Known Secondary structure												G	G	G	G		S	S	.	.	.	S	T	T									S																			T		G	G	G	S	T	T	S	S
Template Predicted Secondary structure																			.	.	.
									247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																			.	.	.
Query Sequence		.	.	.	.	.	.	.	Y	F	R	E	Y	Q	P	P	L	L	A	V	W	G	E	H	D	P	F	F	L	P	P	G	A	E	A	W	K	R	D	I	P	D	.	.	.	A	D	I	R	L	Y	D	T	G	H	F	A	L	E	T	H
Query Conservation		.	.	.	.	.	.	.																																			.	.	.
Alig confidence		.	.	.	.	.	.	.																																			.	.	.
Template Conservation
Template Sequence		T	L	C	G	V	P	I	D	I	S	K	I	D	I	P	V	Y	M	F	A	A	R	E	D	H	I	V	L	W	S	S	A	Y	S	G	L	K	Y	L	S	G	T	P	S	R	R	F	V	L	G	A	S	G	H	I	A	G	S	I	N
Template Known Secondary structure				T	T					G	G	G			S								T	T		S	S	S								G	G	G	G		T	T		S								S	S							S
Template Predicted Secondary structure
		297	.	.																														300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	P	T	I	R	Q	F	L	D	D	H
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	T	K	D	K	R	N	Y	W	T	N	E	Q	L	P	V	N	P	E	E	W	L	E	G	A	Q	S	H	P	G	S	W	W	K	D	W	D	A	W	L	A	P	Q
Template Known Secondary structure			T	T	T			S						S				S	S							T						S		T									G	G	G
Template Predicted Secondary structure

No model constructed - rank, confidence too low

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Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
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