Job Description Undefined Confidence 99.84% Date Thu Nov 13 08:26:15 GMT 2025 Rank 409 Aligned Residues 290 % Identity 10% Template c5t6oA_ PDB info PDB header: biosynthetic protein Chain: A: PDB Molecule: Poly-beta-hydroxybuterate polymerase PDBTitle: structure of the catalytic domain of the class i polyhydroxybutyrate synthase from cupriavidus necator PDB Entry: PDBe RCSB PDBj Resolution UNK

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.
Predicted Secondary structure																														.	.																			.	.	.	.	.
Query Sequence		R	A	S	A	A	P	Q	V	H	Y	R	V	E	Q	V	G	D	V	K	V	F	Y	R	E	A	G	D	P	.	.	A	A	P	A	V	L	L	L	H	G	F	A	A	S	S	Y	M	W	.	.	.	.	.	R	D	V	I	E	A	L
Query Conservation																														.	.																			.	.	.	.	.
Alig confidence																														.	.																			.	.	.	.	.
Template Conservation
Template Sequence		G	R	N	V	A	V	T	E	G	A	V	V	F	E	N	E	Y	F	Q	L	L	Q	Y	K	P	L	T	D	K	V	H	A	R	P	L	L	M	V	P	P	C	I	N	K	Y	Y	I	L	D	L	Q	P	E	S	S	L	V	R	H	V
Template Known Secondary structure		T	T	T	B	S											S	S										S	S				S	S								S	S	S		G	G	G	G	G		S	G	G	G
Template Predicted Secondary structure
		76	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure				.
Query Sequence		A	D	.	G	Y	H	V	I	A	P	D	L	P	A	F	G	Y	T	E	A	P	A	R	G	Q	Y	D	Y	T	F	A	N	L	T	K	T	I	E	R	F	T	D	Q	L	K	L	T	R	Y	A	M	A	V	H	D	Y	G	A	P	V
Query Conservation				.
Alig confidence				.																		.
Template Conservation																						.
Template Sequence		V	E	Q	G	H	T	V	F	L	V	S	W	R	N	P	D	A	S	M	A	.	G	S	T	W	D	D	Y	I	E	H	A	A	I	R	A	I	E	V	A	R	D	I	S	G	Q	D	K	I	N	V	L	G	F	A	V	G	G	T	I
Template Known Secondary structure				T	T													G	G	G	T	.	T										T													T		S								T
Template Predicted Secondary structure																						.
		135	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure								.	.	.	.
Query Sequence		G	W	R	L	A	L	.	.	.	.	A	H	P	S	R	I	T	A	I	I	S	Q	N	G	N	A	Y	E	E	G	L	S	A	G	W	E	P	I	R	K	Y	W	N	D	P	T	A	E	N	R	Q	A	L	S	D	F	P	T	P	A
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.																																					.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		V	S	T	A	L	A	V	L	A	A	R	G	E	H	P	A	A	S	V	T	L	L	T	T	L	L	D	F	A	D	T	G	I	L	D	V	F	V	D	E	G	H	V	Q	G	A	.	.	.	.	.	.	.	P	C	A	L	L	R	G
Template Known Secondary structure												T	T											S			S	S		T	T		S	T	T	G	G	G	T	T		S						.	.	.	.	.	.	.		G	G	G
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.										.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Query Sequence		S	I	K	W	Q	Y	V	E	G	V	S	D	T	S	L	V	A	P	D	A	Y	T	L	E	G	.	.	.	.	.	.	.	.	.	A	Q	I	L	R	P	G	M	A	D	I	Q	L	D	L	L	L	D	Y	A	T	N	V	E	Q	Y
Query Conservation																											.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	L	A	N	T	F	S	F	L	R	P	N	D	L	V	W	N	Y	V	V	D	N	Y	L	K	G	N	T	P	V	P	F	D	L	L	F	W	N	G	D	A	T	N	L	P	G	P	W	Y	C	W	Y	L	R	H	T	Y	L	Q
Template Known Secondary structure							S	T	T	T	T	S			S															S												S																T	T	T	T
Template Predicted Secondary structure
		242	.	.	.	.												.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.																																					.
Query Sequence		P	A	F	Q	A	.	.	.	.	.	.	.	.	.	.	.	Y	F	R	E	Y	Q	P	P	L	L	A	V	W	G	E	H	D	P	F	F	L	P	P	G	A	E	A	W	K	R	D	I	P	D	A	D	.	I	R	L	Y	D	T	G
Query Conservation							.	.	.	.	.	.	.	.	.	.	.																																					.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation
Template Sequence		N	E	L	K	V	P	G	K	L	T	V	C	G	V	P	V	D	L	A	S	I	D	V	P	T	Y	I	Y	G	S	R	E	D	H	I	V	P	W	T	A	A	Y	A	S	T	A	L	L	A	N	K	L	R	F	V	L	G	A	S	G
Template Known Secondary structure				T	T	S	T	T		S			T	T					G	G	G	S		S								T	T		S	S	S							G	G	G	G	T			S								S	S	S
Template Predicted Secondary structure
		290	.	.	.	.	.	.	.	.	.																														300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	F	A	L	E	T	H	S	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	P	T	I	R	Q	F	L	D	D	H	V	S	L	H	R	Q	E	G	A
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	I	A	G	V	I	N	P	P	A	K	N	K	R	S	H	W	T	N	D	A	L	P	E	S	P	Q	Q	W	L	A	G	A	I	E	H	H	G	S	W	W	P	D	W	T	A	W	L	A	G	Q	A	G	A	K	R	A	A	P	A
Template Known Secondary structure							S			G	G	G			S						S				S	S													S		S												S								S
Template Predicted Secondary structure

No model constructed - rank, confidence too low

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Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
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