Job Description Undefined Confidence 99.97% Date Thu Nov 13 08:26:15 GMT 2025 Rank 5 Aligned Residues 273 % Identity 24% Template c5k3dA_ PDB info PDB header: hydrolase Chain: A: PDB Molecule: Fluoroacetate dehalogenase PDBTitle: crystal structure of the fluoroacetate dehalogenase rpa1163 - wt/apo - no halide PDB Entry: PDBe RCSB PDBj Resolution UNK Model Dimensions (Å) X:45.757 Y:47.872 Z:52.547

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

28

.

30

.

.

.

.

.

.

.

.

.

40

.

.

.

.

.

.

.

.

.

50

.

.

.

.

.

.

.

.

.

60

.

.

.

.

.

.

.

.

.

70

.

.

.

.

.

.

.

.

.

80

.

.

.

.

.

.

.

Predicted Secondary structure

Query Sequence

P

Q

V

H

Y

R

V

E

Q

V

G

D

V

K

V

F

Y

R

E

A

G

D

P

A

A

P

A

V

L

L

L

H

G

F

A

A

S

S

Y

M

W

R

D

V

I

E

A

L

A

D

G

Y

H

V

I

A

P

D

L

P

Query Conservation

Alig confidence

.

.

Template Conservation

.

.

Template Sequence

P

G

F

G

S

E

W

I

N

T

S

S

G

R

I

F

A

R

V

G

G

D

.

.

G

P

P

L

L

L

L

H

G

F

P

Q

T

H

V

M

W

H

R

V

A

P

K

L

A

E

R

F

K

V

I

V

A

D

L

P

Template Predicted Secondary structure

.

.

88

.

90

.

.

.

.

.

.

.

.

.

100

.

.

.

.

.

.

.

.

.

110

.

.

.

.

.

.

.

.

.

120

.

.

.

.

.

.

.

.

.

130

.

.

.

.

.

.

.

.

.

140

.

.

.

.

.

Predicted Secondary structure

.

.

Query Sequence

A

F

G

Y

T

E

A

P

A

R

G

Q

Y

D

.

.

Y

T

F

A

N

L

T

K

T

I

E

R

F

T

D

Q

L

K

L

T

R

Y

A

M

A

V

H

D

Y

G

A

P

V

G

W

R

L

A

L

A

H

P

S

R

Query Conservation

.

.

Alig confidence

.

.

Template Conservation

Template Sequence

G

Y

G

W

S

D

M

P

E

S

D

E

Q

H

T

P

Y

T

K

R

A

M

A

K

Q

L

I

E

A

M

E

Q

L

G

H

V

H

F

A

L

A

G

H

D

R

G

A

R

V

S

Y

R

L

A

L

D

S

P

G

R

Template Predicted Secondary structure

146

.

.

.

150

.

.

.

.

.

.

.

.

.

160

.

.

.

.

.

.

.

.

.

170

.

.

.

.

.

.

.

.

.

180

.

.

.

.

.

.

.

.

.

190

.

.

.

.

.

.

.

.

Predicted Secondary structure

.

.

.

.

.

.

.

Query Sequence

I

T

A

I

I

S

Q

N

G

N

A

Y

E

E

G

L

S

A

G

W

E

P

I

R

K

Y

W

N

D

P

T

A

E

N

R

Q

A

L

S

D

F

P

T

P

A

.

.

.

.

.

.

.

S

I

K

W

Q

Y

V

E

Query Conservation

.

.

.

.

.

.

.

Alig confidence

.

.

.

.

.

.

.

Template Conservation

Template Sequence

L

S

K

L

A

V

L

D

I

L

P

T

Y

E

Y

W

Q

R

M

N

R

A

Y

A

L

K

I

Y

H

W

S

F

L

A

Q

P

A

P

L

P

E

N

L

L

G

G

D

P

D

F

Y

V

K

A

K

L

A

S

W

T

Template Predicted Secondary structure

199

200

.

.

.

.

.

.

.

.

.

210

.

.

.

.

.

.

.

.

.

220

.

.

.

.

.

.

.

.

.

230

.

.

.

.

.

.

.

.

.

240

.

.

.

.

.

.

.

.

.

250

.

.

.

.

.

.

.

Predicted Secondary structure

.

Query Sequence

G

V

S

D

T

S

L

V

A

P

D

A

Y

T

L

E

G

A

Q

I

L

R

P

G

M

A

D

I

Q

L

D

L

L

L

D

Y

A

T

N

V

E

Q

Y

P

A

F

Q

A

Y

F

R

.

E

Y

Q

P

P

L

L

A

Query Conservation

.

Alig confidence

.

Template Conservation

Template Sequence

R

A

G

D

L

S

A

F

D

P

R

A

V

E

H

Y

R

I

A

F

A

D

P

M

R

R

H

V

M

C

E

D

Y

R

A

G

A

Y

A

D

F

E

H

D

K

I

D

V

E

A

G

N

K

I

P

V

P

M

L

A

Template Predicted Secondary structure

258

.

260

.

.

.

.

.

.

.

.

.

270

.

.

.

.

.

.

.

.

.

280

.

.

.

.

.

.

.

.

.

290

.

.

.

.

.

.

.

.

.

300

.

.

.

.

.

.

.

.

.

Predicted Secondary structure

Query Sequence

V

W

G

E

H

D

P

F

F

L

P

P

G

A

E

A

W

K

R

D

I

P

D

A

D

I

R

L

Y

D

T

G

H

F

A

L

E

T

H

S

E

V

I

I

P

T

I

R

Q

F

L

D

Query Conservation

Alig confidence

.

.

.

.

.

.

.

Template Conservation

.

.

.

.

.

.

.

Template Sequence

L

W

G

A

T

.

.

.

.

P

L

D

V

W

R

K

W

A

S

D

V

Q

G

A

P

I

.

.

.

E

S

G

H

F

L

P

E

E

A

P

D

Q

T

A

E

A

L

V

R

F

F

S

Template Predicted Secondary structure

.

.

.

.

.

.

.

---

Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
© Structural Bioinformatics Group, Imperial College, London Michael Sternberg   Disclaimer Terms and Conditions		Phyre2 is part of Genome3D